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FFCP PHASE1:Mm9::chr7:51697768..51697795,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=272381
|EntrezGene=272381
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=P0C192
|UniProt=P0C192
|association_with_transcript=-59bp_to_ENSMUST00000058667_5end
|association_with_transcript=-59bp_to_ENSMUST00000058667_5end
|cluster_id=chr7:51697768..51697795,+
|description=CAGE_peak_7_at_Lrrc4b_5end
|description=CAGE_peak_7_at_Lrrc4b_5end
|id=chr7:51697768..51697795,+
|id=chr7:51697768..51697795,+
|ontology_enrichment_celltype=CL:0000540!6.51e-20!33;CL:0000047!6.51e-20!33;CL:0000031!6.51e-20!33;CL:0000404!6.51e-20!33;CL:0000117!4.50e-17!23;CL:0000337!4.50e-17!23;CL:0002319!8.45e-17!43;CL:0000221!1.28e-16!44;CL:0000133!1.28e-16!44;CL:0000393!3.08e-14!39;CL:0000211!3.08e-14!39;CL:0000055!6.05e-12!50
|ontology_enrichment_celltype=CL:0000540!6.51e-20!33;CL:0000047!6.51e-20!33;CL:0000031!6.51e-20!33;CL:0000404!6.51e-20!33;CL:0000117!4.50e-17!23;CL:0000337!4.50e-17!23;CL:0002319!8.45e-17!43;CL:0000221!1.28e-16!44;CL:0000133!1.28e-16!44;CL:0000393!3.08e-14!39;CL:0000211!3.08e-14!39;CL:0000055!6.05e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.28e-32,33;CL:0000047,5.28e-32,33;CL:0000031,5.28e-32,33;CL:0000404,5.28e-32,33;CL:0000117,6.85e-30,23;CL:0000337,6.85e-30,23;CL:0002319,8.10e-26,43;CL:0000393,1.43e-25,39;CL:0000211,1.43e-25,39;CL:0000221,5.35e-25,44;CL:0000133,5.35e-25,44;CL:0002321,4.44e-12,70;CL:0002609,7.92e-10,6;CL:0000723,2.97e-07,91;CL:0000048,2.97e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.62e-32!73;UBERON:0005743!6.62e-32!73;UBERON:0000073!1.61e-31!75;UBERON:0001016!1.61e-31!75;UBERON:0002346!3.11e-29!71;UBERON:0003075!3.11e-29!71;UBERON:0007284!3.11e-29!71;UBERON:0004121!5.84e-29!102;UBERON:0000924!5.84e-29!102;UBERON:0006601!5.84e-29!102;UBERON:0001049!9.17e-24!52;UBERON:0005068!9.17e-24!52;UBERON:0006241!9.17e-24!52;UBERON:0007135!9.17e-24!52;UBERON:0000033!3.81e-23!63;UBERON:0000955!1.30e-21!50;UBERON:0006238!1.30e-21!50;UBERON:0002616!3.23e-21!49;UBERON:0003056!2.12e-20!49;UBERON:0002020!1.97e-18!34;UBERON:0003080!1.24e-17!40;UBERON:0002780!5.97e-17!39;UBERON:0001890!5.97e-17!39;UBERON:0006240!5.97e-17!39;UBERON:0002791!6.67e-15!29;UBERON:0003528!6.67e-15!29;UBERON:0001893!6.67e-15!29;UBERON:0000025!2.36e-11!114;UBERON:0007811!3.59e-11!86;UBERON:0004111!8.72e-10!122;UBERON:0000956!9.89e-10!21;UBERON:0001869!9.89e-10!21;UBERON:0000203!9.89e-10!21;UBERON:0000153!3.44e-09!94;UBERON:0002619!2.68e-07!17;UBERON:0003076!9.34e-07!12;UBERON:0003057!9.34e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.54e-45,73;UBERON:0001016,6.61e-44,75;UBERON:0000073,5.21e-36,54;UBERON:0004121,1.61e-35,95;UBERON:0000924,1.61e-35,95;UBERON:0006601,1.61e-35,95;UBERON:0002346,5.50e-35,64;UBERON:0003075,5.50e-35,64;UBERON:0007284,5.50e-35,64;UBERON:0001049,5.58e-34,52;UBERON:0005068,5.58e-34,52;UBERON:0006241,5.58e-34,52;UBERON:0007135,5.58e-34,52;UBERON:0002020,6.87e-31,34;UBERON:0010371,5.75e-29,73;UBERON:0010314,1.77e-27,92;UBERON:0002616,1.27e-26,46;UBERON:0000955,7.91e-26,47;UBERON:0006238,7.91e-26,47;UBERON:0003528,1.73e-24,29;UBERON:0002791,1.73e-24,29;UBERON:0001893,1.73e-24,29;UBERON:0003080,4.95e-24,40;UBERON:0002780,7.23e-23,39;UBERON:0001890,7.23e-23,39;UBERON:0006240,7.23e-23,39;UBERON:0003056,5.66e-22,49;UBERON:0000956,3.56e-15,21;UBERON:0001869,3.56e-15,21;UBERON:0000203,3.56e-15,21;UBERON:0000025,1.31e-13,114;UBERON:0002619,2.76e-12,17;UBERON:0004111,7.04e-12,122;UBERON:0002420,8.65e-11,8;UBERON:0007245,8.65e-11,8;UBERON:0010009,8.65e-11,8;UBERON:0010011,8.65e-11,8;UBERON:0000454,8.65e-11,8;UBERON:0003076,3.58e-10,12;UBERON:0003057,3.58e-10,12;UBERON:0002240,1.17e-08,6;UBERON:0005174,1.17e-08,6;UBERON:0001137,1.17e-08,6;UBERON:0002021,1.42e-08,10;UBERON:0000411,1.42e-08,10;UBERON:0001950,1.42e-08,10;UBERON:0000483,7.91e-08,174;UBERON:0000369,9.43e-08,5;UBERON:0002435,9.43e-08,5;UBERON:0000204,9.43e-08,5;UBERON:0010082,9.43e-08,5;UBERON:0011216,1.14e-07,194;UBERON:0001948,1.21e-07,5;UBERON:0002315,1.21e-07,5;UBERON:0000119,1.37e-07,176
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0,0,0,0,0,0,0,0,2.83243045203437,8.46385566835253,5.07065122804943,0,0,0,0,0,1.49800055259202,3.07374644257244,5.39185984004084,7.2903206699113,4.83747411108179,4.85606673486466,3.09215957332259,4.5321595709533,5.07980996396653,6.43453150627015,2.20231761998777,1.91531007127782,2.15049146558741,3.29715719325485,4.94033275453012,4.16730696445408,2.79182999001381,2.25105044012672,2.59757021220577,3.83017161115768,3.98640706237488,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,2.34224637609238,1.46612694769419,0,0,0,0,3.44518470631092,2.28750301409313,8.41884159156192,0.869121600961382,4.09144731728529,4.1557608911912,4.70499662896497,0.101839363850316,0,0,0.420883711772948,0.650602214813519,0.689706313300419,0.540186389416048,0.60281927134286,1.2246569847239,1.7935920839879,1.12442069471675,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,1.86413195281952,0.234526059981096,0.720248245844059,0.946978942340841,1.18058539048442,0.771335564436891,1.86027155800326,1.87791380979733,1.16765342367169,2.13927804887525,0.820837320395476,0.324275238183423,0.730999937126662,0.219550115291051,0.134206418760372,1.05144974282064,6.79170441703277,0,0,0.639864751605702,0.928946687441754,0,0.403367049246685,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0,0,0,0,0,0,3.05046120976805,4.45404409050372,0,0,2.52406575533005,1.95219372148319,3.01592756825919,1.19484398976276,1.78238939265915,0.849229592366497,1.21443210502468,1.16902343164525,0,0.963963949265421,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,1.16422815404479,0.428674070063185,0.354680467284547,0.535106452806212,0.658196082408484,1.522324745573,0,0,0,0,0.161464426695906,0,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.84130094602871,3.43737308063638,1.71853182343688,4.7955776383945,0,2.02506750069542,2.70192721934532,2.26571204492102,1.03552062350364,0.103787347584177,1.99512436700516,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,1.51618327058278,0.50695859978048,0.565879024158229,0.37456602987953,0.512201219238954,0.516919220600519,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,1.1921809497366,0.145346416632329,0.282328141245992,0.25384382367503,0.73171189149109,1.57841826862706,0.407412341537585,0.561142271657738,0.949080144993393,0.886540341380071,1.22769312950907,1.08455788830176,0.385813221962283,3.2475375131933,0.233931608445408,0.859484216193193,0.191288332068843,0,0
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0,0,0,0,0,0,0,0,2.83243045203437,8.46385566835253,5.07065122804943,0,0,0,0,0,1.49800055259202,3.07374644257244,5.39185984004084,7.2903206699113,4.83747411108179,4.85606673486466,3.09215957332259,4.5321595709533,5.07980996396653,6.43453150627015,2.20231761998777,1.91531007127782,2.15049146558741,3.29715719325485,4.94033275453012,4.16730696445408,2.79182999001381,2.25105044012672,2.59757021220577,3.83017161115768,3.98640706237488,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,2.34224637609238,1.46612694769419,0,0,0,0,3.44518470631092,2.28750301409313,8.41884159156192,0.869121600961382,4.09144731728529,4.1557608911912,4.70499662896497,0.101839363850316,0,0,0.420883711772948,0.650602214813519,0.689706313300419,0.540186389416048,0.60281927134286,1.2246569847239,1.7935920839879,1.12442069471675,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,1.86413195281952,0.234526059981096,0.720248245844059,0.946978942340841,1.18058539048442,0.771335564436891,1.86027155800326,1.87791380979733,1.16765342367169,2.13927804887525,0.820837320395476,0.324275238183423,0.730999937126662,0.219550115291051,0.134206418760372,1.05144974282064,6.79170441703277,0,0,0.639864751605702,0.928946687441754,0,0.403367049246685,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0,0,0,0,0,0,3.05046120976805,4.45404409050372,0,0,2.52406575533005,1.95219372148319,3.01592756825919,1.19484398976276,1.78238939265915,0.849229592366497,1.21443210502468,1.16902343164525,0,0.963963949265421,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,1.16422815404479,0.428674070063185,0.354680467284547,0.535106452806212,0.658196082408484,1.522324745573,0,0,0,0,0.161464426695906,0,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.84130094602871,3.43737308063638,1.71853182343688,4.7955776383945,0,2.02506750069542,2.70192721934532,2.26571204492102,1.03552062350364,0.103787347584177,1.99512436700516,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,1.51618327058278,0.50695859978048,0.565879024158229,0.37456602987953,0.512201219238954,0.516919220600519,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,1.1921809497366,0.145346416632329,0.282328141245992,0.25384382367503,0.73171189149109,1.57841826862706,0.407412341537585,0.561142271657738,0.949080144993393,0.886540341380071,1.22769312950907,1.08455788830176,0.385813221962283,3.2475375131933,0.233931608445408,0.859484216193193,0.191288332068843,0,0
|short_description=p7@Lrrc4b
|short_description=p7@Lrrc4b
}}
}}

Latest revision as of 19:14, 26 September 2015

Short description:p7@Lrrc4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Lrrc4b_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -59bp_to_ENSMUST00000058667_5end
EntrezGene:Lrrc4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Lrrc4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.54e-4573
nervous system6.61e-4475
regional part of nervous system5.21e-3654
ectoderm-derived structure1.61e-3595
ectoderm1.61e-3595
presumptive ectoderm1.61e-3595
neurectoderm5.50e-3564
neural plate5.50e-3564
presumptive neural plate5.50e-3564
neural tube5.58e-3452
neural rod5.58e-3452
future spinal cord5.58e-3452
neural keel5.58e-3452
gray matter6.87e-3134
ecto-epithelium5.75e-2973
structure with developmental contribution from neural crest1.77e-2792
regional part of brain1.27e-2646
brain7.91e-2647
future brain7.91e-2647
brain grey matter1.73e-2429
regional part of telencephalon1.73e-2429
telencephalon1.73e-2429
anterior neural tube4.95e-2440
regional part of forebrain7.23e-2339
forebrain7.23e-2339
future forebrain7.23e-2339
pre-chordal neural plate5.66e-2249
cerebral cortex3.56e-1521
cerebral hemisphere3.56e-1521
pallium3.56e-1521
tube1.31e-13114
regional part of cerebral cortex2.76e-1217
anatomical conduit7.04e-12122
basal ganglion8.65e-118
nuclear complex of neuraxis8.65e-118
aggregate regional part of brain8.65e-118
collection of basal ganglia8.65e-118
cerebral subcortex8.65e-118
posterior neural tube3.58e-1012
chordal neural plate3.58e-1012
spinal cord1.17e-086
dorsal region element1.17e-086
dorsum1.17e-086
occipital lobe1.42e-0810
visual cortex1.42e-0810
neocortex1.42e-0810
epithelium7.91e-08174
corpus striatum9.43e-085
striatum9.43e-085
ventral part of telencephalon9.43e-085
future corpus striatum9.43e-085
organ system subdivision1.14e-07194
regional part of spinal cord1.21e-075
gray matter of spinal cord1.21e-075
cell layer1.37e-07176
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