FFCP PHASE1:Mm9::chr7:30290466..30290492,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74206 | |EntrezGene=74206 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9J0,E9Q103 | |UniProt=G3X9J0,E9Q103 | ||
|association_with_transcript=0bp_to_ENSMUST00000085809,ENSMUST00000085811,NM_001081028,uc009gbs.1,uc009gbu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000085809,ENSMUST00000085811,NM_001081028,uc009gbs.1,uc009gbu.1_5end | ||
|cluster_id=chr7:30290466..30290492,- | |||
|description=CAGE_peak_4_at_Sipa1l3_5end | |description=CAGE_peak_4_at_Sipa1l3_5end | ||
|id=chr7:30290466..30290492,- | |id=chr7:30290466..30290492,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.19e-08,6;CL:0000677,1.19e-08,6;CL:0000584,1.19e-08,6;CL:0000075,3.42e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.44e-16!59;UBERON:0004119!2.85e-12!130;UBERON:0000925!2.85e-12!130;UBERON:0006595!2.85e-12!130;UBERON:0001007!3.57e-12!128;UBERON:0001555!3.57e-12!128;UBERON:0007026!3.57e-12!128;UBERON:0000160!3.75e-12!43;UBERON:0004921!3.70e-11!126;UBERON:0004185!3.70e-11!126;UBERON:0004923!1.18e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.85e-17,47;UBERON:0000160,6.77e-16,31;UBERON:0004923,8.71e-12,24;UBERON:0000344,1.95e-10,15;UBERON:0001007,4.43e-09,116;UBERON:0001555,4.43e-09,116;UBERON:0007026,4.43e-09,116;UBERON:0004119,1.06e-08,118;UBERON:0000925,1.06e-08,118;UBERON:0006595,1.06e-08,118;UBERON:0001242,2.36e-08,13;UBERON:0001262,2.36e-08,13;UBERON:0004786,2.36e-08,13;UBERON:0004921,6.13e-08,114;UBERON:0005178,4.60e-07,17;UBERON:0005181,4.60e-07,17;UBERON:0002224,4.60e-07,17;UBERON:0000915,4.60e-07,17;UBERON:0008947,4.60e-07,17;UBERON:0003258,4.60e-07,17 | |||
|phase1_expression=0,20.2405736430829,20.4749657725291,8.16653370528441,9.01612313903425,9.73699777088961,8.87728034262997,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,0.699561878128147,1.26184866143295,0.411343300817216,0.84877930359606,0.935476191661768,0,0,6.71968175732308,5.96464130774642,17.2269589234506,15.5074318617267,14.4365725899546,1.90023419456374,1.51218077855958,4.21287970245079,0,0,0,0.288851619751275,0,0,3.34825304589526,1.5626706890476,2.09409497589519,4.70585190424811,4.78131839470912,2.42755176515577,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,2.38140145112336,1.26679932737549,2.52762222507392,0.68510327831436,5.69663344023778,0.29688427812965,0,0.913396434936424,0,0,0.23517741427141,0,1.73036477414062,0.578397427679647,2.65383165584962,0.808834249737046,1.32504911076236,2.42437626567611,1.86391761218122,0,0,5.10914110417183,1.1981512450592,1.19980546198682,2.54140454146129,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0.505445516867349,0,0,0,0.360124259610698,0.30140963567143,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0.348252166522167,0.411564272815887,0,4.21327912387941,3.86021860672073,1.98914449576915,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,5.94753809370836,5.81791246659797,0.426576501070468,0.232236671860439,0.77320476793256,2.8235693447268,1.55664630691409,1.52180500890047,2.37264530772256,2.30578536613615,1.75934646160189,3.18330355265841,3.70431765526328,0.898819408654221,3.8904848977445,1.39398891278057,0.379335801906163,0.114248512609729,0,0.203651327845314,0.387904974335251,0.561086559122548,0.948548056863859,1.62371162777562,1.09899109488962,0.987177311374404,0,0.166845105716094,0,0.674586337154561,0.608580364165509,0.482354319504834,0,0.863088412352432,0.810676133875177,0.549122826376163,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,3.8798169934987,0,0.325929952884052,0.169745085775188,0.704070744865506,3.01511263395268,1.6663054862021,1.95133647857799,1.26108115284953,1.99318220683897,1.11618338060241,3.27726629431476,2.76295970985433,1.3018415272336,3.01582567878545,2.71952841909355,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.488660878060728,1.31976098378028,0,1.69946445308487,1.81394134178851,0.565815239267694,0.590603785761546,0.614870295887855,1.80899805217755,0.727067458955011,0.712994756769443,0.316036757935816,5.27093042874994,0,0.680879211507576,0,0,0.428674070063185,0.354680467284547,0.713475270408282,0,1.522324745573,0.469343416127421,0.42366414172764,0.220528398054962,1.97863503529776,1.13025098687134,0.241251699712623,0.238744688006273,0.656563598980245,2.62332752966866,0,1.87957968877638,1.65109494370578,2.77791791054568,1.13021074202815,0.683471138605126,2.0590035588587,3.56954702987096,3.07893195112048,2.62579950228405,3.81868247206045,0,0.609958401380546,0.648032044930808,0.627264888043406,1.09181281873089,0.944050424693745,0.909188012978695,1.30877970992015,1.55537967950151,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0.948033361884535,0,0.308132871494482,0.909445760844565,0,0.198681354781265,0.480781798079875,0.147689527174577,0.706765149637033,0.304827226619999,0.403304740547362,0.682205165178267,0.384847366561318,0.584384510907845,0.453460767230423,0,0,0,0.19318959403219,1.12609485270709,2.56412273974171,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.561849044819294,0.256100609619477,0.631790158511746,0.952587382566147,0.579421629724277,0.38581844092741,0,0.588795680537589,0.685738504770831,1.06485483695602,0.476872379894642,0.726732083161643,0.564656282491984,0.592302255241736,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.429742108096597,0.57386499620653,0.882365676478062,1.15933917810211 | |phase1_expression=0,20.2405736430829,20.4749657725291,8.16653370528441,9.01612313903425,9.73699777088961,8.87728034262997,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,0.699561878128147,1.26184866143295,0.411343300817216,0.84877930359606,0.935476191661768,0,0,6.71968175732308,5.96464130774642,17.2269589234506,15.5074318617267,14.4365725899546,1.90023419456374,1.51218077855958,4.21287970245079,0,0,0,0.288851619751275,0,0,3.34825304589526,1.5626706890476,2.09409497589519,4.70585190424811,4.78131839470912,2.42755176515577,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,2.38140145112336,1.26679932737549,2.52762222507392,0.68510327831436,5.69663344023778,0.29688427812965,0,0.913396434936424,0,0,0.23517741427141,0,1.73036477414062,0.578397427679647,2.65383165584962,0.808834249737046,1.32504911076236,2.42437626567611,1.86391761218122,0,0,5.10914110417183,1.1981512450592,1.19980546198682,2.54140454146129,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0.505445516867349,0,0,0,0.360124259610698,0.30140963567143,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0.348252166522167,0.411564272815887,0,4.21327912387941,3.86021860672073,1.98914449576915,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,5.94753809370836,5.81791246659797,0.426576501070468,0.232236671860439,0.77320476793256,2.8235693447268,1.55664630691409,1.52180500890047,2.37264530772256,2.30578536613615,1.75934646160189,3.18330355265841,3.70431765526328,0.898819408654221,3.8904848977445,1.39398891278057,0.379335801906163,0.114248512609729,0,0.203651327845314,0.387904974335251,0.561086559122548,0.948548056863859,1.62371162777562,1.09899109488962,0.987177311374404,0,0.166845105716094,0,0.674586337154561,0.608580364165509,0.482354319504834,0,0.863088412352432,0.810676133875177,0.549122826376163,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,3.8798169934987,0,0.325929952884052,0.169745085775188,0.704070744865506,3.01511263395268,1.6663054862021,1.95133647857799,1.26108115284953,1.99318220683897,1.11618338060241,3.27726629431476,2.76295970985433,1.3018415272336,3.01582567878545,2.71952841909355,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.488660878060728,1.31976098378028,0,1.69946445308487,1.81394134178851,0.565815239267694,0.590603785761546,0.614870295887855,1.80899805217755,0.727067458955011,0.712994756769443,0.316036757935816,5.27093042874994,0,0.680879211507576,0,0,0.428674070063185,0.354680467284547,0.713475270408282,0,1.522324745573,0.469343416127421,0.42366414172764,0.220528398054962,1.97863503529776,1.13025098687134,0.241251699712623,0.238744688006273,0.656563598980245,2.62332752966866,0,1.87957968877638,1.65109494370578,2.77791791054568,1.13021074202815,0.683471138605126,2.0590035588587,3.56954702987096,3.07893195112048,2.62579950228405,3.81868247206045,0,0.609958401380546,0.648032044930808,0.627264888043406,1.09181281873089,0.944050424693745,0.909188012978695,1.30877970992015,1.55537967950151,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0.948033361884535,0,0.308132871494482,0.909445760844565,0,0.198681354781265,0.480781798079875,0.147689527174577,0.706765149637033,0.304827226619999,0.403304740547362,0.682205165178267,0.384847366561318,0.584384510907845,0.453460767230423,0,0,0,0.19318959403219,1.12609485270709,2.56412273974171,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.561849044819294,0.256100609619477,0.631790158511746,0.952587382566147,0.579421629724277,0.38581844092741,0,0.588795680537589,0.685738504770831,1.06485483695602,0.476872379894642,0.726732083161643,0.564656282491984,0.592302255241736,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.429742108096597,0.57386499620653,0.882365676478062,1.15933917810211 | ||
|short_description=p4@Sipa1l3 | |short_description=p4@Sipa1l3 | ||
}} | }} |
Latest revision as of 13:59, 26 September 2015
Short description: | p4@Sipa1l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sipa1l3_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 0bp_to_ENSMUST00000085809, ENSMUST00000085811, NM_001081028, uc009gbs.1, uc009gbu.1_5end |
EntrezGene: | Sipa1l3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.19e-08 | 6 |
gut absorptive cell | 1.19e-08 | 6 |
enterocyte | 1.19e-08 | 6 |
columnar/cuboidal epithelial cell | 3.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.85e-17 | 47 |
intestine | 6.77e-16 | 31 |
organ component layer | 8.71e-12 | 24 |
mucosa | 1.95e-10 | 15 |
digestive system | 4.43e-09 | 116 |
digestive tract | 4.43e-09 | 116 |
primitive gut | 4.43e-09 | 116 |
endoderm-derived structure | 1.06e-08 | 118 |
endoderm | 1.06e-08 | 118 |
presumptive endoderm | 1.06e-08 | 118 |
intestinal mucosa | 2.36e-08 | 13 |
wall of intestine | 2.36e-08 | 13 |
gastrointestinal system mucosa | 2.36e-08 | 13 |
subdivision of digestive tract | 6.13e-08 | 114 |
thoracic cavity element | 4.60e-07 | 17 |
thoracic segment organ | 4.60e-07 | 17 |
thoracic cavity | 4.60e-07 | 17 |
thoracic segment of trunk | 4.60e-07 | 17 |
respiratory primordium | 4.60e-07 | 17 |
endoderm of foregut | 4.60e-07 | 17 |