FFCP PHASE1:Mm9::chr7:29617397..29617411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:29617397..29617411,+ | |||
|description=CAGE_peak_at_chr7:29617397..29617411,+ | |description=CAGE_peak_at_chr7:29617397..29617411,+ | ||
|id=chr7:29617397..29617411,+ | |id=chr7:29617397..29617411,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.30e-12!9;CL:0002251!1.30e-12!9;CL:0000239!8.65e-09!6;CL:0000677!8.65e-09!6;CL:0000212!8.65e-09!6;CL:0000584!8.65e-09!6;CL:0000075!2.44e-07!7 | |ontology_enrichment_celltype=CL:0002563!1.30e-12!9;CL:0002251!1.30e-12!9;CL:0000239!8.65e-09!6;CL:0000677!8.65e-09!6;CL:0000212!8.65e-09!6;CL:0000584!8.65e-09!6;CL:0000075!2.44e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.47e-24,9;CL:0002251,4.47e-24,9;CL:0000239,2.79e-16,6;CL:0000677,2.79e-16,6;CL:0000584,2.79e-16,6;CL:0000075,7.47e-14,7;CL:0002076,9.66e-14,15;CL:0000066,1.05e-13,25;CL:0000223,7.18e-10,20;CL:0002250,2.28e-09,3;CL:0000682,7.35e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.46e-23!43;UBERON:0005409!2.13e-21!59;UBERON:0000344!1.15e-19!15;UBERON:0001242!1.75e-17!13;UBERON:0000060!1.75e-17!13;UBERON:0001262!1.75e-17!13;UBERON:0004786!1.75e-17!13;UBERON:0004923!1.54e-14!24;UBERON:0003350!1.30e-12!9;UBERON:0004808!1.30e-12!9;UBERON:0001277!1.30e-12!9;UBERON:0000485!8.03e-10!11;UBERON:0004119!1.35e-09!130;UBERON:0000925!1.35e-09!130;UBERON:0006595!1.35e-09!130;UBERON:0001007!2.60e-09!128;UBERON:0001555!2.60e-09!128;UBERON:0007026!2.60e-09!128;UBERON:0004921!3.34e-08!126;UBERON:0004185!3.34e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.60e-53,31;UBERON:0000344,1.61e-38,15;UBERON:0005409,7.23e-36,47;UBERON:0001242,4.75e-34,13;UBERON:0001262,4.75e-34,13;UBERON:0004786,4.75e-34,13;UBERON:0003350,4.47e-24,9;UBERON:0004808,4.47e-24,9;UBERON:0001277,4.47e-24,9;UBERON:0004923,9.29e-23,24;UBERON:0000485,2.23e-19,11;UBERON:0001007,2.55e-13,116;UBERON:0001555,2.55e-13,116;UBERON:0007026,2.55e-13,116;UBERON:0004119,5.46e-13,118;UBERON:0000925,5.46e-13,118;UBERON:0006595,5.46e-13,118;UBERON:0004921,2.47e-11,114;UBERON:0002108,8.83e-11,4;UBERON:0000331,9.35e-09,3;UBERON:0002116,9.35e-09,3;UBERON:0001204,9.35e-09,3;UBERON:0001168,9.35e-09,3 | |||
|phase1_expression=0,2.79180326111489,4.54999239389536,11.4936400296595,14.5259761684441,2.51818907867835,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,3.03985603307473,1.60586496747019,2.8711598205751,3.87685796543167,2.80112602491656,2.47030445293286,3.78045194639896,3.32595765982957,0,0,0,7.22129049378186,3.15845826181135,9.59595974433135,0,0,0,1.17646297606203,2.04913645487534,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,5.28670052774077,0.264450566663544,0,0.232236671860439,0.644337306610467,2.8235693447268,1.55664630691409,2.47293313946327,2.37264530772256,2.14108641141214,2.26201687920243,0.994782360205754,1.75467678407208,3.59527763461689,2.59365659849633,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0,0.165306911450672,0,1.94422459937689,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,2.79180326111489,4.54999239389536,11.4936400296595,14.5259761684441,2.51818907867835,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,3.03985603307473,1.60586496747019,2.8711598205751,3.87685796543167,2.80112602491656,2.47030445293286,3.78045194639896,3.32595765982957,0,0,0,7.22129049378186,3.15845826181135,9.59595974433135,0,0,0,1.17646297606203,2.04913645487534,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,5.28670052774077,0.264450566663544,0,0.232236671860439,0.644337306610467,2.8235693447268,1.55664630691409,2.47293313946327,2.37264530772256,2.14108641141214,2.26201687920243,0.994782360205754,1.75467678407208,3.59527763461689,2.59365659849633,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0,0.165306911450672,0,1.94422459937689,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:29617397..29617411,+ | |short_description=p@chr7:29617397..29617411,+ | ||
}} | }} |
Latest revision as of 23:35, 4 August 2015
Short description: | p@chr7:29617397..29617411, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29617397..29617411, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.47e-24 | 9 |
epithelial cell of alimentary canal | 4.47e-24 | 9 |
brush border epithelial cell | 2.79e-16 | 6 |
gut absorptive cell | 2.79e-16 | 6 |
enterocyte | 2.79e-16 | 6 |
columnar/cuboidal epithelial cell | 7.47e-14 | 7 |
endo-epithelial cell | 9.66e-14 | 15 |
epithelial cell | 1.05e-13 | 25 |
endodermal cell | 7.18e-10 | 20 |
intestinal crypt stem cell | 2.28e-09 | 3 |
M cell of gut | 7.35e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.60e-53 | 31 |
mucosa | 1.61e-38 | 15 |
gastrointestinal system | 7.23e-36 | 47 |
intestinal mucosa | 4.75e-34 | 13 |
wall of intestine | 4.75e-34 | 13 |
gastrointestinal system mucosa | 4.75e-34 | 13 |
epithelium of mucosa | 4.47e-24 | 9 |
gastrointestinal system epithelium | 4.47e-24 | 9 |
intestinal epithelium | 4.47e-24 | 9 |
organ component layer | 9.29e-23 | 24 |
simple columnar epithelium | 2.23e-19 | 11 |
digestive system | 2.55e-13 | 116 |
digestive tract | 2.55e-13 | 116 |
primitive gut | 2.55e-13 | 116 |
endoderm-derived structure | 5.46e-13 | 118 |
endoderm | 5.46e-13 | 118 |
presumptive endoderm | 5.46e-13 | 118 |
subdivision of digestive tract | 2.47e-11 | 114 |
small intestine | 8.83e-11 | 4 |
ileal mucosa | 9.35e-09 | 3 |
ileum | 9.35e-09 | 3 |
mucosa of small intestine | 9.35e-09 | 3 |
wall of small intestine | 9.35e-09 | 3 |