FFCP PHASE1:Mm9::chr18:66669526..66669531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=648 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:66669526..66669531,+ | |||
|description=CAGE_peak_at_chr18:66669526..66669531,+ | |description=CAGE_peak_at_chr18:66669526..66669531,+ | ||
|id=chr18:66669526..66669531,+ | |id=chr18:66669526..66669531,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.60e-12!9;CL:0002251!1.60e-12!9;CL:0000239!5.14e-09!6;CL:0000677!5.14e-09!6;CL:0000212!5.14e-09!6;CL:0000584!5.14e-09!6;CL:0000075!1.41e-07!7 | |ontology_enrichment_celltype=CL:0002563!1.60e-12!9;CL:0002251!1.60e-12!9;CL:0000239!5.14e-09!6;CL:0000677!5.14e-09!6;CL:0000212!5.14e-09!6;CL:0000584!5.14e-09!6;CL:0000075!1.41e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.95e-11,3;CL:0000239,1.01e-08,6;CL:0000677,1.01e-08,6;CL:0000584,1.01e-08,6;CL:0002563,1.26e-08,9;CL:0002251,1.26e-08,9;CL:0000075,1.73e-07,7;CL:0000066,2.57e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.15e-25!59;UBERON:0000160!1.66e-21!43;UBERON:0000344!4.70e-21!15;UBERON:0001242!6.25e-18!13;UBERON:0000060!6.25e-18!13;UBERON:0001262!6.25e-18!13;UBERON:0004786!6.25e-18!13;UBERON:0004923!6.80e-15!24;UBERON:0003350!1.60e-12!9;UBERON:0004808!1.60e-12!9;UBERON:0001277!1.60e-12!9;UBERON:0000485!7.56e-10!11;UBERON:0004119!2.25e-08!130;UBERON:0000925!2.25e-08!130;UBERON:0006595!2.25e-08!130;UBERON:0001007!4.83e-08!128;UBERON:0001555!4.83e-08!128;UBERON:0007026!4.83e-08!128;UBERON:0004921!8.18e-07!126;UBERON:0004185!8.18e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!8.15e-25!59;UBERON:0000160!1.66e-21!43;UBERON:0000344!4.70e-21!15;UBERON:0001242!6.25e-18!13;UBERON:0000060!6.25e-18!13;UBERON:0001262!6.25e-18!13;UBERON:0004786!6.25e-18!13;UBERON:0004923!6.80e-15!24;UBERON:0003350!1.60e-12!9;UBERON:0004808!1.60e-12!9;UBERON:0001277!1.60e-12!9;UBERON:0000485!7.56e-10!11;UBERON:0004119!2.25e-08!130;UBERON:0000925!2.25e-08!130;UBERON:0006595!2.25e-08!130;UBERON:0001007!4.83e-08!128;UBERON:0001555!4.83e-08!128;UBERON:0007026!4.83e-08!128;UBERON:0004921!8.18e-07!126;UBERON:0004185!8.18e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.16e-28,31;UBERON:0005409,1.33e-24,47;UBERON:0000344,1.45e-20,15;UBERON:0001242,6.84e-15,13;UBERON:0001262,6.84e-15,13;UBERON:0004786,6.84e-15,13;UBERON:0004923,1.02e-14,24;UBERON:0001007,6.01e-10,116;UBERON:0001555,6.01e-10,116;UBERON:0007026,6.01e-10,116;UBERON:0004119,1.05e-09,118;UBERON:0000925,1.05e-09,118;UBERON:0006595,1.05e-09,118;UBERON:0003350,1.26e-08,9;UBERON:0004808,1.26e-08,9;UBERON:0001277,1.26e-08,9;UBERON:0001962,2.20e-08,2;UBERON:0001961,2.20e-08,2;UBERON:0001744,2.20e-08,2;UBERON:0002108,3.78e-08,4;UBERON:0004921,7.63e-08,114;UBERON:0000485,5.12e-07,11 | |||
|phase1_expression=0,0.697950815278722,2.27499619694768,0.90739263392049,1.50268718983904,1.51091344720701,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.15980299262857,6.65286915094793,2.8711598205751,4.30761996159075,3.01659725760245,3.80046838912748,1.51218077855958,0.886922042621219,0,0,0,1.1554064790051,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0.484875253135222,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,0,0,0,0,0.605050573870028,0.667134131534611,0.760902504450237,6.16887780007865,1.64698954724011,2.5133520880027,0.795825888164603,1.55971269695296,1.79763881730844,4.53889904736858,4.18196673834171,0,0,0,0,0.193952487167626,0,0,0.295220295959204,0.784993639206874,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,1.07449492442937,1.57053565190418,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0,0.25384382367503,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0.697950815278722,2.27499619694768,0.90739263392049,1.50268718983904,1.51091344720701,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.15980299262857,6.65286915094793,2.8711598205751,4.30761996159075,3.01659725760245,3.80046838912748,1.51218077855958,0.886922042621219,0,0,0,1.1554064790051,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0.484875253135222,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,0,0,0,0,0.605050573870028,0.667134131534611,0.760902504450237,6.16887780007865,1.64698954724011,2.5133520880027,0.795825888164603,1.55971269695296,1.79763881730844,4.53889904736858,4.18196673834171,0,0,0,0,0.193952487167626,0,0,0.295220295959204,0.784993639206874,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,1.07449492442937,1.57053565190418,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0,0.25384382367503,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr18:66669526..66669531,+ | |short_description=p@chr18:66669526..66669531,+ | ||
}} | }} |
Latest revision as of 01:29, 6 August 2015
Short description: | p@chr18:66669526..66669531, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:66669526..66669531, + |
Coexpression cluster: | MCL_coexpression_mm9:648 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.95e-11 | 3 |
brush border epithelial cell | 1.01e-08 | 6 |
gut absorptive cell | 1.01e-08 | 6 |
enterocyte | 1.01e-08 | 6 |
intestinal epithelial cell | 1.26e-08 | 9 |
epithelial cell of alimentary canal | 1.26e-08 | 9 |
columnar/cuboidal epithelial cell | 1.73e-07 | 7 |
epithelial cell | 2.57e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.16e-28 | 31 |
gastrointestinal system | 1.33e-24 | 47 |
mucosa | 1.45e-20 | 15 |
intestinal mucosa | 6.84e-15 | 13 |
wall of intestine | 6.84e-15 | 13 |
gastrointestinal system mucosa | 6.84e-15 | 13 |
organ component layer | 1.02e-14 | 24 |
digestive system | 6.01e-10 | 116 |
digestive tract | 6.01e-10 | 116 |
primitive gut | 6.01e-10 | 116 |
endoderm-derived structure | 1.05e-09 | 118 |
endoderm | 1.05e-09 | 118 |
presumptive endoderm | 1.05e-09 | 118 |
epithelium of mucosa | 1.26e-08 | 9 |
gastrointestinal system epithelium | 1.26e-08 | 9 |
intestinal epithelium | 1.26e-08 | 9 |
gut-associated lymphoid tissue | 2.20e-08 | 2 |
mucosa-associated lymphoid tissue | 2.20e-08 | 2 |
lymphoid tissue | 2.20e-08 | 2 |
small intestine | 3.78e-08 | 4 |
subdivision of digestive tract | 7.63e-08 | 114 |
simple columnar epithelium | 5.12e-07 | 11 |