FFCP PHASE1:Mm9::chr9:65270835..65270849,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330962 | |EntrezGene=330962 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WK2 | |UniProt=Q80WK2 | ||
|association_with_transcript=-255bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |association_with_transcript=-255bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | ||
|cluster_id=chr9:65270835..65270849,- | |||
|description=CAGE_peak_6_at_Ostb_5end | |description=CAGE_peak_6_at_Ostb_5end | ||
|id=chr9:65270835..65270849,- | |id=chr9:65270835..65270849,- | ||
|ontology_enrichment_celltype=CL:0000239!1.59e-09!6;CL:0000677!1.59e-09!6;CL:0000212!1.59e-09!6;CL:0000584!1.59e-09!6;CL:0000075!5.37e-08!7;CL:0002563!8.78e-08!9;CL:0002251!8.78e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.92e-14,6;CL:0000677,6.92e-14,6;CL:0000584,6.92e-14,6;CL:0000075,8.62e-12,7;CL:0002563,5.39e-09,9;CL:0002251,5.39e-09,9;CL:0000682,1.38e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.04e-21!43;UBERON:0005409!2.16e-16!59;UBERON:0000344!9.00e-16!15;UBERON:0001242!3.68e-13!13;UBERON:0000060!3.68e-13!13;UBERON:0001262!3.68e-13!13;UBERON:0004786!3.68e-13!13;UBERON:0004923!1.99e-08!24;UBERON:0002113!7.37e-08!14;UBERON:0003918!7.37e-08!14;UBERON:0005095!7.37e-08!14;UBERON:0007687!7.37e-08!14;UBERON:0003350!8.78e-08!9;UBERON:0004808!8.78e-08!9;UBERON:0001277!8.78e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-41,31;UBERON:0005409,3.13e-27,47;UBERON:0000344,6.57e-21,15;UBERON:0001242,5.88e-17,13;UBERON:0001262,5.88e-17,13;UBERON:0004786,5.88e-17,13;UBERON:0004923,5.26e-12,24;UBERON:0002108,2.64e-10,4;UBERON:0001007,3.80e-09,116;UBERON:0001555,3.80e-09,116;UBERON:0007026,3.80e-09,116;UBERON:0003350,5.39e-09,9;UBERON:0004808,5.39e-09,9;UBERON:0001277,5.39e-09,9;UBERON:0004119,7.00e-09,118;UBERON:0000925,7.00e-09,118;UBERON:0006595,7.00e-09,118;UBERON:0000331,2.52e-08,3;UBERON:0002116,2.52e-08,3;UBERON:0001204,2.52e-08,3;UBERON:0001168,2.52e-08,3;UBERON:0004921,1.37e-07,114;UBERON:0000485,3.24e-07,11 | |||
|phase1_expression=0,50.6014341077074,52.7799117691862,9.98131897312539,13.5241847085514,5.20425742926858,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,10.3995074815714,13.9939661450974,52.8293406985819,40.060865642794,32.1052136701975,25.8431850460668,23.1867719379136,30.8205409810874,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,18.6483650302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,8.99131926656051,0,0,0.128867461322093,1.00841762311671,2.2237804384487,2.85338439168839,10.9141684155238,15.646400698781,3.51869292320377,4.17808591286417,5.26403035221624,17.0775687644302,15.561939590978,10.5544874824815,0.189667900953082,0.342745537829186,2.25415471346161,0.610953983535943,1.74557238450863,1.8936671370386,3.22506339333712,6.05201606716369,6.90794402502049,8.88459580236964,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4933101186746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,50.6014341077074,52.7799117691862,9.98131897312539,13.5241847085514,5.20425742926858,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,10.3995074815714,13.9939661450974,52.8293406985819,40.060865642794,32.1052136701975,25.8431850460668,23.1867719379136,30.8205409810874,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,6.05174562511018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,18.6483650302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,8.99131926656051,0,0,0.128867461322093,1.00841762311671,2.2237804384487,2.85338439168839,10.9141684155238,15.646400698781,3.51869292320377,4.17808591286417,5.26403035221624,17.0775687644302,15.561939590978,10.5544874824815,0.189667900953082,0.342745537829186,2.25415471346161,0.610953983535943,1.74557238450863,1.8936671370386,3.22506339333712,6.05201606716369,6.90794402502049,8.88459580236964,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4933101186746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p6@Ostb | |short_description=p6@Ostb | ||
}} | }} |
Latest revision as of 00:22, 27 September 2015
Short description: | p6@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ostb_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -255bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.92e-14 | 6 |
gut absorptive cell | 6.92e-14 | 6 |
enterocyte | 6.92e-14 | 6 |
columnar/cuboidal epithelial cell | 8.62e-12 | 7 |
intestinal epithelial cell | 5.39e-09 | 9 |
epithelial cell of alimentary canal | 5.39e-09 | 9 |
M cell of gut | 1.38e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.96e-41 | 31 |
gastrointestinal system | 3.13e-27 | 47 |
mucosa | 6.57e-21 | 15 |
intestinal mucosa | 5.88e-17 | 13 |
wall of intestine | 5.88e-17 | 13 |
gastrointestinal system mucosa | 5.88e-17 | 13 |
organ component layer | 5.26e-12 | 24 |
small intestine | 2.64e-10 | 4 |
digestive system | 3.80e-09 | 116 |
digestive tract | 3.80e-09 | 116 |
primitive gut | 3.80e-09 | 116 |
epithelium of mucosa | 5.39e-09 | 9 |
gastrointestinal system epithelium | 5.39e-09 | 9 |
intestinal epithelium | 5.39e-09 | 9 |
endoderm-derived structure | 7.00e-09 | 118 |
endoderm | 7.00e-09 | 118 |
presumptive endoderm | 7.00e-09 | 118 |
ileal mucosa | 2.52e-08 | 3 |
ileum | 2.52e-08 | 3 |
mucosa of small intestine | 2.52e-08 | 3 |
wall of small intestine | 2.52e-08 | 3 |
subdivision of digestive tract | 1.37e-07 | 114 |
simple columnar epithelium | 3.24e-07 | 11 |