FFCP PHASE1:Mm9::chr7:19814274..19814293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:19814274..19814293,+ | |||
|description=CAGE_peak_at_chr7:19814274..19814293,+ | |description=CAGE_peak_at_chr7:19814274..19814293,+ | ||
|id=chr7:19814274..19814293,+ | |id=chr7:19814274..19814293,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.92e-09!9;CL:0002251!8.92e-09!9;CL:0000066!6.70e-08!25;CL:0000063!7.09e-08!66;CL:0000075!6.99e-07!7 | |ontology_enrichment_celltype=CL:0002563!8.92e-09!9;CL:0002251!8.92e-09!9;CL:0000066!6.70e-08!25;CL:0000063!7.09e-08!66;CL:0000075!6.99e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.92e-25,9;CL:0002251,7.92e-25,9;CL:0000066,1.39e-21,25;CL:0000223,1.06e-20,20;CL:0000239,5.32e-17,6;CL:0000677,5.32e-17,6;CL:0000584,5.32e-17,6;CL:0000075,1.83e-14,7;CL:0002076,3.56e-14,15;CL:0002250,2.14e-09,3;CL:0000182,4.46e-08,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.11e-12!15;UBERON:0001242!2.32e-11!13;UBERON:0000060!2.32e-11!13;UBERON:0001262!2.32e-11!13;UBERON:0004786!2.32e-11!13;UBERON:0000485!8.75e-10!11;UBERON:0003350!8.92e-09!9;UBERON:0004808!8.92e-09!9;UBERON:0001277!8.92e-09!9;UBERON:0004923!1.49e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-33,15;UBERON:0001242,5.28e-29,13;UBERON:0001262,5.28e-29,13;UBERON:0004786,5.28e-29,13;UBERON:0003350,7.92e-25,9;UBERON:0004808,7.92e-25,9;UBERON:0001277,7.92e-25,9;UBERON:0000485,5.50e-20,11;UBERON:0004923,1.34e-19,24;UBERON:0000160,1.72e-16,31;UBERON:0002108,2.66e-10,4;UBERON:0005409,1.00e-09,47;UBERON:0003929,3.29e-09,55;UBERON:0000331,2.56e-08,3;UBERON:0002116,2.56e-08,3;UBERON:0001204,2.56e-08,3;UBERON:0001168,2.56e-08,3;UBERON:0000490,3.71e-08,66;UBERON:0001007,6.76e-08,116;UBERON:0001555,6.76e-08,116;UBERON:0007026,6.76e-08,116;UBERON:0004119,1.13e-07,118;UBERON:0000925,1.13e-07,118;UBERON:0006595,1.13e-07,118 | |||
|phase1_expression=0.640595388419176,12.563114675017,5.91499011206397,19.0552453123303,28.0501608769954,3.86122325397347,2.80335168714631,2.96983643915625,0.985521055061667,5.38348410540585,0,0.159544317990673,0.684802919724823,1.39872643870396,0,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0,1.75991665072747,1.14704640533585,4.59385571292016,0.430761996159075,2.37018355954478,2.47030445293286,2.01624103807945,1.55211357458713,6.98533740805594,2.46025915033828,0,12.1317680295535,5.31950865147176,15.9252097884648,0.418531630736908,0,1.57057123192139,14.1175557127443,1.36609096991689,0.485510353031154,0.125896817975577,0,0.367093504323363,0,0,0,0,0,1.43752564364972,0.335565212115473,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.227178579999552,0.0755715601067855,4.92769630792852,0,0,1.07940638327563,1.29955283489534,1.34408066129201,0.280888840263504,0.340860645156116,0,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,1.27728527604296,0.599075622529601,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0.438599962275997,0.219550115291051,0.402619256281115,0.420579897128254,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0,0,0.667134131534611,0.570676878337677,0,1.15289268306808,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0.995706366271836,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.784993639206874,0.616985819609003,2.66807364378434,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0.42366414172764,0.441056796109924,0,0,0.241251699712623,0,0,1.1659233465194,0.18542530201051,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,1.01987057996313,0.559805809294632,0.276399947608848,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.777689839750757,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.39061315453185,0,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.640595388419176,12.563114675017,5.91499011206397,19.0552453123303,28.0501608769954,3.86122325397347,2.80335168714631,2.96983643915625,0.985521055061667,5.38348410540585,0,0.159544317990673,0.684802919724823,1.39872643870396,0,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0,1.75991665072747,1.14704640533585,4.59385571292016,0.430761996159075,2.37018355954478,2.47030445293286,2.01624103807945,1.55211357458713,6.98533740805594,2.46025915033828,0,12.1317680295535,5.31950865147176,15.9252097884648,0.418531630736908,0,1.57057123192139,14.1175557127443,1.36609096991689,0.485510353031154,0.125896817975577,0,0.367093504323363,0,0,0,0,0,1.43752564364972,0.335565212115473,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.227178579999552,0.0755715601067855,4.92769630792852,0,0,1.07940638327563,1.29955283489534,1.34408066129201,0.280888840263504,0.340860645156116,0,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,1.27728527604296,0.599075622529601,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0.438599962275997,0.219550115291051,0.402619256281115,0.420579897128254,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0,0,0.667134131534611,0.570676878337677,0,1.15289268306808,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0.995706366271836,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.784993639206874,0.616985819609003,2.66807364378434,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0.42366414172764,0.441056796109924,0,0,0.241251699712623,0,0,1.1659233465194,0.18542530201051,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,1.01987057996313,0.559805809294632,0.276399947608848,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.777689839750757,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.39061315453185,0,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:19814274..19814293,+ | |short_description=p@chr7:19814274..19814293,+ | ||
}} | }} |
Latest revision as of 17:35, 4 August 2015
Short description: | p@chr7:19814274..19814293, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:19814274..19814293, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.92e-25 | 9 |
epithelial cell of alimentary canal | 7.92e-25 | 9 |
epithelial cell | 1.39e-21 | 25 |
endodermal cell | 1.06e-20 | 20 |
brush border epithelial cell | 5.32e-17 | 6 |
gut absorptive cell | 5.32e-17 | 6 |
enterocyte | 5.32e-17 | 6 |
columnar/cuboidal epithelial cell | 1.83e-14 | 7 |
endo-epithelial cell | 3.56e-14 | 15 |
intestinal crypt stem cell | 2.14e-09 | 3 |
hepatocyte | 4.46e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.69e-33 | 15 |
intestinal mucosa | 5.28e-29 | 13 |
wall of intestine | 5.28e-29 | 13 |
gastrointestinal system mucosa | 5.28e-29 | 13 |
epithelium of mucosa | 7.92e-25 | 9 |
gastrointestinal system epithelium | 7.92e-25 | 9 |
intestinal epithelium | 7.92e-25 | 9 |
simple columnar epithelium | 5.50e-20 | 11 |
organ component layer | 1.34e-19 | 24 |
intestine | 1.72e-16 | 31 |
small intestine | 2.66e-10 | 4 |
gastrointestinal system | 1.00e-09 | 47 |
gut epithelium | 3.29e-09 | 55 |
ileal mucosa | 2.56e-08 | 3 |
ileum | 2.56e-08 | 3 |
mucosa of small intestine | 2.56e-08 | 3 |
wall of small intestine | 2.56e-08 | 3 |
unilaminar epithelium | 3.71e-08 | 66 |
digestive system | 6.76e-08 | 116 |
digestive tract | 6.76e-08 | 116 |
primitive gut | 6.76e-08 | 116 |
endoderm-derived structure | 1.13e-07 | 118 |
endoderm | 1.13e-07 | 118 |
presumptive endoderm | 1.13e-07 | 118 |