FFCP PHASE1:Mm9::chr9:40273169..40273180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |EntrezGene=235283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENSMUST00000148170_5end | |association_with_transcript=-20bp_to_ENSMUST00000148170_5end | ||
|cluster_id=chr9:40273169..40273180,- | |||
|description=CAGE_peak_21_at_Gramd1b_5end | |description=CAGE_peak_21_at_Gramd1b_5end | ||
|id=chr9:40273169..40273180,- | |id=chr9:40273169..40273180,- | ||
|ontology_enrichment_celltype=CL:0000239!2.15e-11!6;CL:0000677!2.15e-11!6;CL:0000212!2.15e-11!6;CL:0000584!2.15e-11!6;CL:0000075!1.31e-09!7;CL:0002563!3.12e-07!9;CL:0002251!3.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.06e-24,6;CL:0000677,8.06e-24,6;CL:0000584,8.06e-24,6;CL:0000075,2.37e-20,7;CL:0002563,1.02e-15,9;CL:0002251,1.02e-15,9;CL:0000682,1.13e-12,3;CL:0000066,1.04e-11,25;CL:0002076,3.24e-09,15;CL:0000223,9.08e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.30e-20!43;UBERON:0005409!1.55e-17!59;UBERON:0000344!7.82e-15!15;UBERON:0004923!1.47e-13!24;UBERON:0001242!4.04e-12!13;UBERON:0000060!4.04e-12!13;UBERON:0001262!4.04e-12!13;UBERON:0004786!4.04e-12!13;UBERON:0003350!3.12e-07!9;UBERON:0004808!3.12e-07!9;UBERON:0001277!3.12e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.79e-18,24;UBERON:0000160,4.04e-16,31;UBERON:0000344,7.62e-16,15;UBERON:0003350,1.02e-15,9;UBERON:0004808,1.02e-15,9;UBERON:0001277,1.02e-15,9;UBERON:0001242,2.14e-14,13;UBERON:0001262,2.14e-14,13;UBERON:0004786,2.14e-14,13;UBERON:0000485,9.12e-13,11;UBERON:0005631,1.48e-12,3;UBERON:0000478,1.48e-12,3;UBERON:0000158,1.48e-12,3;UBERON:0005409,6.45e-10,47;UBERON:0001987,1.47e-08,2;UBERON:0003124,1.47e-08,2;UBERON:0004340,1.47e-08,2 | |||
|phase1_expression=0,13.6100408979351,14.5599756604652,14.8207463540347,13.5241847085514,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.95995453676044,1.37645568640302,8.03924749761028,9.90752591165872,2.37018355954478,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,17.7980376768749,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,4.23120906661671,0,0.232236671860439,0,0.403367049246685,0.667134131534611,0,1.89811624617805,1.4822905925161,0.251335208800269,0.198956472041151,0,0,1.08069024937347,3.38540164532424,0,0,0,0.407302655690628,0,0.0701358198903186,0.442655759869801,2.36176236767363,2.511979645462,2.83813477020141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,1.90648863777438,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,13.6100408979351,14.5599756604652,14.8207463540347,13.5241847085514,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.95995453676044,1.37645568640302,8.03924749761028,9.90752591165872,2.37018355954478,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,17.7980376768749,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,4.23120906661671,0,0.232236671860439,0,0.403367049246685,0.667134131534611,0,1.89811624617805,1.4822905925161,0.251335208800269,0.198956472041151,0,0,1.08069024937347,3.38540164532424,0,0,0,0.407302655690628,0,0.0701358198903186,0.442655759869801,2.36176236767363,2.511979645462,2.83813477020141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,1.90648863777438,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p21@Gramd1b | |short_description=p21@Gramd1b | ||
}} | }} |
Latest revision as of 15:21, 26 September 2015
Short description: | p21@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -20bp_to_ENSMUST00000148170_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.06e-24 | 6 |
gut absorptive cell | 8.06e-24 | 6 |
enterocyte | 8.06e-24 | 6 |
columnar/cuboidal epithelial cell | 2.37e-20 | 7 |
intestinal epithelial cell | 1.02e-15 | 9 |
epithelial cell of alimentary canal | 1.02e-15 | 9 |
M cell of gut | 1.13e-12 | 3 |
epithelial cell | 1.04e-11 | 25 |
endo-epithelial cell | 3.24e-09 | 15 |
endodermal cell | 9.08e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 3.79e-18 | 24 |
intestine | 4.04e-16 | 31 |
mucosa | 7.62e-16 | 15 |
epithelium of mucosa | 1.02e-15 | 9 |
gastrointestinal system epithelium | 1.02e-15 | 9 |
intestinal epithelium | 1.02e-15 | 9 |
intestinal mucosa | 2.14e-14 | 13 |
wall of intestine | 2.14e-14 | 13 |
gastrointestinal system mucosa | 2.14e-14 | 13 |
simple columnar epithelium | 9.12e-13 | 11 |
extraembryonic membrane | 1.48e-12 | 3 |
extraembryonic structure | 1.48e-12 | 3 |
membranous layer | 1.48e-12 | 3 |
gastrointestinal system | 6.45e-10 | 47 |
placenta | 1.47e-08 | 2 |
chorion | 1.47e-08 | 2 |
allantois | 1.47e-08 | 2 |