FFCP PHASE1:Mm9::chr17:56615909..56615916,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19280 | |EntrezGene=19280 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=B0V2N1 | |UniProt=B0V2N1 | ||
|association_with_transcript=-3bp_to_ENSMUST00000067538_5end | |association_with_transcript=-3bp_to_ENSMUST00000067538_5end | ||
|cluster_id=chr17:56615909..56615916,- | |||
|description=CAGE_peak_8_at_Ptprs_5end | |description=CAGE_peak_8_at_Ptprs_5end | ||
|id=chr17:56615909..56615916,- | |id=chr17:56615909..56615916,- | ||
|ontology_enrichment_celltype=CL:0000221!7.95e-12!44;CL:0000133!7.95e-12!44;CL:0002319!1.44e-11!43;CL:0000117!9.98e-11!23;CL:0000337!9.98e-11!23;CL:0000055!1.26e-10!50;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33;CL:0000393!2.22e-08!39;CL:0000211!2.22e-08!39 | |ontology_enrichment_celltype=CL:0000221!7.95e-12!44;CL:0000133!7.95e-12!44;CL:0002319!1.44e-11!43;CL:0000117!9.98e-11!23;CL:0000337!9.98e-11!23;CL:0000055!1.26e-10!50;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33;CL:0000393!2.22e-08!39;CL:0000211!2.22e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-20,23;CL:0000337,2.87e-20,23;CL:0002319,1.17e-17,43;CL:0000221,3.83e-17,44;CL:0000133,3.83e-17,44;CL:0000540,7.05e-15,33;CL:0000047,7.05e-15,33;CL:0000031,7.05e-15,33;CL:0000404,7.05e-15,33;CL:0000393,5.32e-12,39;CL:0000211,5.32e-12,39;CL:0002609,1.43e-10,6;CL:0002321,3.14e-10,70;CL:0002613,1.89e-08,3;CL:0000120,3.30e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.61e-15!73;UBERON:0005743!8.61e-15!73;UBERON:0000073!1.13e-14!75;UBERON:0001016!1.13e-14!75;UBERON:0004121!5.38e-14!102;UBERON:0000924!5.38e-14!102;UBERON:0006601!5.38e-14!102;UBERON:0002346!6.85e-14!71;UBERON:0003075!6.85e-14!71;UBERON:0007284!6.85e-14!71;UBERON:0000033!2.50e-13!63;UBERON:0003056!8.80e-13!49;UBERON:0001049!1.04e-12!52;UBERON:0005068!1.04e-12!52;UBERON:0006241!1.04e-12!52;UBERON:0007135!1.04e-12!52;UBERON:0000955!2.54e-10!50;UBERON:0006238!2.54e-10!50;UBERON:0002616!2.65e-10!49;UBERON:0002780!2.36e-09!39;UBERON:0001890!2.36e-09!39;UBERON:0006240!2.36e-09!39;UBERON:0003080!2.51e-09!40;UBERON:0002020!1.20e-08!34;UBERON:0000025!4.54e-07!114;UBERON:0004111!9.66e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!8.61e-15!73;UBERON:0005743!8.61e-15!73;UBERON:0000073!1.13e-14!75;UBERON:0001016!1.13e-14!75;UBERON:0004121!5.38e-14!102;UBERON:0000924!5.38e-14!102;UBERON:0006601!5.38e-14!102;UBERON:0002346!6.85e-14!71;UBERON:0003075!6.85e-14!71;UBERON:0007284!6.85e-14!71;UBERON:0000033!2.50e-13!63;UBERON:0003056!8.80e-13!49;UBERON:0001049!1.04e-12!52;UBERON:0005068!1.04e-12!52;UBERON:0006241!1.04e-12!52;UBERON:0007135!1.04e-12!52;UBERON:0000955!2.54e-10!50;UBERON:0006238!2.54e-10!50;UBERON:0002616!2.65e-10!49;UBERON:0002780!2.36e-09!39;UBERON:0001890!2.36e-09!39;UBERON:0006240!2.36e-09!39;UBERON:0003080!2.51e-09!40;UBERON:0002020!1.20e-08!34;UBERON:0000025!4.54e-07!114;UBERON:0004111!9.66e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.75e-13,95;UBERON:0000924,4.75e-13,95;UBERON:0006601,4.75e-13,95;UBERON:0001017,5.85e-13,73;UBERON:0001016,1.84e-12,75;UBERON:0002346,2.05e-11,64;UBERON:0003075,2.05e-11,64;UBERON:0007284,2.05e-11,64;UBERON:0002020,7.38e-11,34;UBERON:0010371,2.14e-09,73;UBERON:0001049,2.72e-09,52;UBERON:0005068,2.72e-09,52;UBERON:0006241,2.72e-09,52;UBERON:0007135,2.72e-09,52;UBERON:0003056,8.26e-09,49;UBERON:0000073,8.39e-09,54;UBERON:0010314,3.40e-08,92;UBERON:0001948,2.53e-07,5;UBERON:0002315,2.53e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.496454756004426,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.367093504323363,2.34717403304412,0.65407546914134,0.659058548203415,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0.899899717281399,0.988866362566974,0,1.79760066311043,1.15265491596466,1.76272340924412,1.89008313664367,1.26194976810829,1.14260393761521,1.32521124570968,0.857435594504678,2.58782771749238,3.67687514644008,0,0.383062014255563,0.614426133024974,1.58263545276233,3.01909223887952,2.08365348222704,0.279182999001381,0.56276261003168,0.61119299110724,1.17851434189467,1.28134512719193,0.559198337475902,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0,0,0.563373679106722,0,2.54805239706646,0,0,0.760079596425296,0,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0.41557608911912,0.486723789203273,1.12023300235348,0.373220911830279,0.505445516867349,0.210441855886474,0.910843100738926,1.14951052216736,1.62055916824814,1.20563854268572,1.49680298132921,0.640568601424249,0.937017245597288,0.517406741478031,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0,0.995171334092466,0,0,0,0.621377317606506,0.703578179943289,1.2604344302271,1.18372367792605,0.393528463494808,0.154267112887378,0,0.268273401399619,0.350296027101508,0.493679549740441,0,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,0.210289948564127,1.44066457330998,0,0.264450566663544,0.639864751605702,0,0,0.201683524623343,0,0,0.949058123089023,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.571242563048644,1.1270773567308,1.01825663922657,0.387904974335251,0.350679099451593,0.442655759869801,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0,0.252578877947112,0,0,0.369506380333209,0.568474235311454,0.977789858652155,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.945810864637146,0.8858587585951,0.797273843287435,0.327726629431476,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.222798674082394,1.13230612315533,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.712262414669021,0.488660878060728,0.659880491890142,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.03486947026204,1.07168517515796,0.886701168211368,0.535106452806212,0.658196082408484,0.913394847343798,0,0,0,0,0,0.180938774784468,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.276399947608848,0,0.790839983952838,0.609958401380546,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,1.04661582230785,0.66183396182839,1.36115831840833,0.904118764344118,0.506868376472335,0.821500670520278,0.651021924219751,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0.194915761479505,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,1.59609949360412,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0.50695859978048,0.188626341386076,0.280924522409647,0.704276676453562,0.287177344778066,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.883193520806384,0,0.354951612318675,0,0.436039249896986,0.0941093804153306,0.507687647350059,0,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.619747364743864,0,1.49886346762768,0.233931608445408,0.214871054048298,0.765153328275374,0.441182838239031,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.496454756004426,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.367093504323363,2.34717403304412,0.65407546914134,0.659058548203415,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0.899899717281399,0.988866362566974,0,1.79760066311043,1.15265491596466,1.76272340924412,1.89008313664367,1.26194976810829,1.14260393761521,1.32521124570968,0.857435594504678,2.58782771749238,3.67687514644008,0,0.383062014255563,0.614426133024974,1.58263545276233,3.01909223887952,2.08365348222704,0.279182999001381,0.56276261003168,0.61119299110724,1.17851434189467,1.28134512719193,0.559198337475902,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0,0,0.563373679106722,0,2.54805239706646,0,0,0.760079596425296,0,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0.41557608911912,0.486723789203273,1.12023300235348,0.373220911830279,0.505445516867349,0.210441855886474,0.910843100738926,1.14951052216736,1.62055916824814,1.20563854268572,1.49680298132921,0.640568601424249,0.937017245597288,0.517406741478031,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0,0.995171334092466,0,0,0,0.621377317606506,0.703578179943289,1.2604344302271,1.18372367792605,0.393528463494808,0.154267112887378,0,0.268273401399619,0.350296027101508,0.493679549740441,0,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,0.210289948564127,1.44066457330998,0,0.264450566663544,0.639864751605702,0,0,0.201683524623343,0,0,0.949058123089023,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.571242563048644,1.1270773567308,1.01825663922657,0.387904974335251,0.350679099451593,0.442655759869801,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0,0.252578877947112,0,0,0.369506380333209,0.568474235311454,0.977789858652155,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.945810864637146,0.8858587585951,0.797273843287435,0.327726629431476,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.222798674082394,1.13230612315533,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.712262414669021,0.488660878060728,0.659880491890142,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.03486947026204,1.07168517515796,0.886701168211368,0.535106452806212,0.658196082408484,0.913394847343798,0,0,0,0,0,0.180938774784468,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.276399947608848,0,0.790839983952838,0.609958401380546,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,1.04661582230785,0.66183396182839,1.36115831840833,0.904118764344118,0.506868376472335,0.821500670520278,0.651021924219751,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0.194915761479505,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,1.59609949360412,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0.50695859978048,0.188626341386076,0.280924522409647,0.704276676453562,0.287177344778066,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.883193520806384,0,0.354951612318675,0,0.436039249896986,0.0941093804153306,0.507687647350059,0,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.619747364743864,0,1.49886346762768,0.233931608445408,0.214871054048298,0.765153328275374,0.441182838239031,0.231867835620421 | ||
|short_description=p8@Ptprs | |short_description=p8@Ptprs | ||
}} | }} |
Latest revision as of 17:13, 26 September 2015
Short description: | p8@Ptprs |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ptprs_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -3bp_to_ENSMUST00000067538_5end |
EntrezGene: | Ptprs |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.87e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.87e-20 | 23 |
neural cell | 1.17e-17 | 43 |
ectodermal cell | 3.83e-17 | 44 |
neurectodermal cell | 3.83e-17 | 44 |
neuron | 7.05e-15 | 33 |
neuronal stem cell | 7.05e-15 | 33 |
neuroblast | 7.05e-15 | 33 |
electrically signaling cell | 7.05e-15 | 33 |
electrically responsive cell | 5.32e-12 | 39 |
electrically active cell | 5.32e-12 | 39 |
neuron of cerebral cortex | 1.43e-10 | 6 |
embryonic cell | 3.14e-10 | 70 |
striatum neuron | 1.89e-08 | 3 |
granule cell | 3.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.75e-13 | 95 |
ectoderm | 4.75e-13 | 95 |
presumptive ectoderm | 4.75e-13 | 95 |
central nervous system | 5.85e-13 | 73 |
nervous system | 1.84e-12 | 75 |
neurectoderm | 2.05e-11 | 64 |
neural plate | 2.05e-11 | 64 |
presumptive neural plate | 2.05e-11 | 64 |
gray matter | 7.38e-11 | 34 |
ecto-epithelium | 2.14e-09 | 73 |
neural tube | 2.72e-09 | 52 |
neural rod | 2.72e-09 | 52 |
future spinal cord | 2.72e-09 | 52 |
neural keel | 2.72e-09 | 52 |
pre-chordal neural plate | 8.26e-09 | 49 |
regional part of nervous system | 8.39e-09 | 54 |
structure with developmental contribution from neural crest | 3.40e-08 | 92 |
regional part of spinal cord | 2.53e-07 | 5 |
gray matter of spinal cord | 2.53e-07 | 5 |