FF:751-24B9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005395 | ||
|accession_numbers=CAGE;DRX009026;DRR009900;DRZ001325;DRZ002708;DRZ012675;DRZ014058 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0002365,UBERON:0005172,UBERON:0006925,UBERON:0002530,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0002330,UBERON:0000916,UBERON:0002423 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000305,FF:0011416 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!2.15!162.88!Creb3l3;;chr1:173144144..173144176,+!p1@Nr1i3!2.13!135.42!Nr1i3;;chr7:19608891..19608895,-!p1@Foxa3!2.06!144.79!Foxa3;;chr2:163372884..163372904,+!p1@Hnf4a!1.90!77.70!Hnf4a;;chr1:173144100..173144138,+!p2@Nr1i3!1.88!74.58!Nr1i3;;chr9:74709695..74709722,+!p1@Onecut1!1.87!73.02!Onecut1;;chr4:133109285..133109308,+!p1@Nr0b2!1.83!67.09!Nr0b2;;chr5:135582751..135582788,+!p1@Mlxipl!1.75!213.43!Mlxipl;;chr10:88996295..88996335,-!p3@Nr1h4!1.75!65.84!Nr1h4;;chr10:88969376..88969395,-!p1@Nr1h4!1.75!55.54!Nr1h4;;chr15:85566184..85566238,+!p1@Ppara!1.74!78.95!Ppara;;chr16:38294860..38294924,-!p1@Nr1i2!1.73!52.11!Nr1i2;;chr10:88996336..88996380,-!p2@Nr1h4!1.70!60.22!Nr1h4;;chr15:85566537..85566552,+!p2@Ppara!1.58!36.82!Ppara;;chr15:85602655..85602680,+!p5@Ppara!1.56!35.57!Ppara;;chr11:90249521..90249551,-!p3@Hlf!1.56!35.57!Hlf;;chr18:64499674..64499696,+!p1@Onecut2!1.38!39.32!Onecut2;;chr2:147872790..147872821,-!p2@Foxa2!1.33!20.59!Foxa2;;chr4:32334732..32334739,+!p7@Bach2!1.33!20.28!Bach2;;chr13:31650185..31650201,+!p1@Foxq1!1.32!67.71!Foxq1;;chr19:37509324..37509337,+!p1@Hhex!1.30!130.43!Hhex;;chr2:163372869..163372882,+!p3@Hnf4a!1.29!18.41!Hnf4a;;chr18:64499706..64499721,+!p2@Onecut2!1.26!24.03!Onecut2;;chr10:22539932..22539956,-!p1@Tcf21!1.24!43.69!Tcf21;;chr14:63864056..63864102,-!p1@Gata4!1.24!28.40!Gata4;;chr2:77357622..77357704,-!p1@Zfp385b!1.20!39.94!Zfp385b;;chr2:173044380..173044432,-!p1@Zbp1!1.18!33.39!Zbp1;;chr15:85566241..85566253,+!p6@Ppara!1.18!14.04!Ppara;;chr1:191994550..191994623,-!p1@Prox1!1.17!93.92!Prox1;;chr11:121380640..121380655,-!p1@Zfp750!1.13!20.91!Zfp750;;chr11:100683839..100683890,-!p2@Stat5b!1.12!28.71!Stat5b;;chr10:88145766..88145770,-!p1@Spic!1.12!15.91!Spic;;chr11:83664365..83664383,+!p1@Hnf1b!1.12!12.17!Hnf1b;;chr5:115421065..115421088,-!p1@Hnf1a!1.11!11.86!Hnf1a;;chr8:59799772..59799789,+!p1@Hand2!1.10!33.70!Hand2;;chr6:90415250..90415271,+!p4@Klf15!1.09!11.23!Klf15;;chr1:191993385..191993405,-!p3@Prox1!1.09!11.23!Prox1;;chr15:103164702..103164778,-!p3@Zfp385a!1.08!13.11!Zfp385a;;chr3:94176733..94176794,+!p1@Rorc!1.05!79.88!Rorc;;chr1:138857048..138857071,-!p2@Nr5a2!1.05!10.30!Nr5a2;;chr1:138857076..138857105,-!p1@Nr5a2!1.05!10.30!Nr5a2;;chr11:60023912..60023930,-!p1@Srebf1!1.04!242.45!Srebf1;;chr7:52071956..52071978,-!p1@Atf5!1.03!316.09!Atf5;;chr7:35904304..35904320,+!p1@Cebpa!1.03!200.33!Cebpa;;chr14:100683884..100683908,-!p4@Klf12!1.03!18.41!Klf12;;chr10:5734677..5734702,-!p4@Esr1!1.03!9.67!Esr1;;chr2:91034924..91034946,-!p2@Nr1h3!1.02!11.86!Nr1h3;;chr9:24578720..24578735,-!p1@Tbx20!1.02!9.36!Tbx20;;chr15:85566051..85566080,+!p4@Ppara!1.00!10.61!Ppara;;chr2:147871627..147871641,-!p1@Foxa2!0.99!8.74!Foxa2;;chr10:88996274..88996286,-!p4@Nr1h4!0.97!8.43!Nr1h4;;chr2:91035254..91035271,-!p3@Nr1h3!0.96!10.30!Nr1h3;;chr1:138857112..138857130,-!p7@Nr5a2!0.96!8.11!Nr5a2;;chr17:87153519..87153533,+!p5@Epas1!0.95!11.86!Epas1;;chr10:80555299..80555306,-!p3@Creb3l3!0.94!7.80!Creb3l3;;chr10:5734660..5734670,-!p7@Esr1!0.94!7.80!Esr1;;chr3:102768047..102768060,-!p1@Nr1h5!0.93!7.49!Nr1h5;;chr16:38294929..38294940,-!p2@Nr1i2!0.93!7.49!Nr1i2;;chr2:173044357..173044377,-!p2@Zbp1!0.91!10.30!Zbp1;;chr2:148506935..148506954,+!p2@Gzf1!0.90!14.35!Gzf1;;chr9:69137716..69137744,+!p1@Rora!0.89!44.31!Rora;;chr2:27532479..27532509,+!p3@Rxra!0.87!13.73!Rxra;;chr15:85602581..85602598,+!p8@Ppara!0.86!6.24!Ppara;;chr10:80555398..80555409,-!p2@Creb3l3!0.86!6.24!Creb3l3;;chr10:80555285..80555291,-!p4@Creb3l3!0.84!5.93!Creb3l3;;chr4:44723559..44723593,-!p1@Pax5!0.84!5.93!Pax5;;chr1:13364477..13364492,-!p6@Ncoa2!0.83!7.18!Ncoa2;;chr2:27531961..27531974,+!p7@Rxra!0.82!5.62!Rxra;;chr2:160698288..160698358,-!p3@Zhx3!0.81!17.79!Zhx3;;chr1:138845748..138845766,-!p4@Nr5a2!0.81!7.18!Nr5a2;;chr9:51021788..51021802,+!p1@Pou2af1!0.81!6.55!Pou2af1;;chr14:100683912..100683947,-!p2@Klf12!0.80!17.47!Klf12;;chr8:87643578..87643593,-!p1@Zfp791!0.80!11.55!Zfp791;;chr7:51787434..51787448,-!p1@Spib!0.80!7.80!Spib;;chr9:74709682..74709691,+!p3@Onecut1!0.80!5.30!Onecut1;;chr2:91035197..91035237,-!p1@Nr1h3!0.79!11.23!Nr1h3;;chr12:58646974..58647003,-!p1@Foxa1!0.78!6.86!Foxa1;;chr6:15135639..15135655,+!p9@Foxp2!0.78!6.24!Foxp2;;chr8:73905892..73905903,-!p5@Nr2f6!0.78!5.93!Nr2f6;;chr10:5734907..5734920,-!p11@Esr1!0.78!4.99!Esr1;;chr12:36219645..36219730,-!p1@Ahr!0.77!52.42!Ahr;;chr10:82226649..82226694,-!p2@Nfyb!0.76!33.08!Nfyb;;chr2:38206744..38206766,+!p1@Lhx2!0.76!5.93!Lhx2;;chr11:121380594..121380609,-!p2@Zfp750!0.75!8.43!Zfp750;;chr2:38206580..38206600,+!p2@Lhx2!0.75!5.93!Lhx2;;chr19:37511111..37511115,+!p2@Hhex!0.75!4.68!Hhex;;chr10:5734525..5734569,-!p3@Esr1!0.74!7.80!Esr1;;chr17:87153505..87153516,+!p6@Epas1!0.73!6.24!Epas1;;chr6:16848347..16848391,-!p1@Tfec!0.73!5.93!Tfec;;chr15:85565338..85565355,+!p7@Ppara!0.73!4.37!Ppara;;chr3:3508024..3508069,+!p2@Hnf4g!0.73!4.37!Hnf4g;;chr6:144730427..144730508,-!p1@Sox5!0.71!28.71!Sox5;;chr14:100683672..100683717,-!p1@Klf12!0.71!21.53!Klf12;;chr6:134780337..134780355,+!p3@Crebl2!0.71!5.62!Crebl2;;chr19:10315179..10315241,-!p1@Gm98!0.70!47.12!Gm98;;chr11:121380611..121380625,-!p3@Zfp750!0.70!4.99!Zfp750;;chr13:83643159..83643226,+!p3@Mef2c!0.70!4.06!Mef2c;;chr1:38721792..38721845,-!p1@Aff3!0.69!4.99!Aff3;;chr17:87153028..87153049,+!p2@Epas1!0.68!89.87!Epas1;;chr7:148452314..148452329,-!p1@Irf7!0.68!29.96!Irf7;;chr13:30841099..30841116,+!p1@Irf4!0.68!6.24!Irf4;;chr6:90415281..90415295,+!p5@Klf15!0.68!3.74!Klf15;;chr10:5734717..5734727,-!p12@Esr1!0.68!3.74!Esr1;;chr10:82226613..82226641,-!p4@Nfyb!0.67!11.23!Nfyb;;chr2:27532754..27532815,+!p1@Rxra!0.66!121.38!Rxra;;chr1:191994700..191994711,-!p4@Prox1!0.65!3.43!Prox1;;chr4:44723520..44723544,-!p2@Pax5!0.65!3.43!Pax5;;chr11:100720767..100720797,+!p4@Stat5a!0.65!3.43!Stat5a;;chr8:79426176..79426275,+!p1@Nr3c2!0.64!19.66!Nr3c2;;chr6:108610766..108610781,+!p2@Bhlhe40!0.64!6.55!Bhlhe40;;chr6:90412582..90412601,+!p1@Klf15!0.63!17.79!Klf15;;chr17:87153240..87153254,+!p1@Epas1!0.62!74.89!Epas1;;chr14:17407970..17408015,-!p2@Rarb!0.62!9.67!Rarb;;chr8:123608252..123608268,+!p1@Foxf1a!0.62!4.99!Foxf1a;;chr2:27532513..27532525,+!p8@Rxra!0.62!3.74!Rxra;;chr2:133377954..133377973,+!p1@Bmp2!0.61!11.55!Bmp2;;chr6:144157924..144157955,-!p2@Sox5!0.61!4.06!Sox5;;chr14:18493386..18493464,+!p1@Thrb!0.60!13.42!Thrb;;chr4:6917921..6917970,-!p2@Tox!0.60!9.67!Tox;;chr11:53583960..53584007,+!p2@Irf1!0.60!7.18!Irf1;;chr9:96159147..96159204,+!p2@Tfdp2!0.60!6.24!Tfdp2;;chr4:97444471..97444514,+!p1@Nfia!0.59!92.99!Nfia;;chr10:127707602..127707633,+!p1@Stat2!0.59!30.89!Stat2;;chr11:11586218..11586285,+!p1@Ikzf1!0.59!10.92!Ikzf1;;chr18:36441119..36441158,+!p2@Pura!0.59!8.11!Pura;;chr6:115310872..115310899,+!p2@Pparg!0.59!5.62!Pparg;;chr2:153475178..153475196,+!p1@Dnmt3b!0.58!6.86!Dnmt3b;;chr1:194979361..194979373,+!p2@Irf6!0.58!4.06!Irf6;;chr2:147871948..147871977,-!p3@Foxa2!0.58!2.81!Foxa2;;chr8:91568074..91568094,-!p1@Sall1!0.58!2.81!Sall1;;chr11:60036258..60036276,-!p3@Srebf1!0.57!5.30!Srebf1;;chr1:194979315..194979359,+!p1@Irf6!0.56!19.66!Irf6;;chr3:95238432..95238455,+!p2@Arnt!0.56!18.41!Arnt;;chr1:186556375..186556404,-!p3@Hlx!0.56!5.30!Hlx;;chr18:11052606..11052633,+!p4@Gata6!0.55!7.49!Gata6;;chr1:138846047..138846074,-!p5@Nr5a2!0.55!2.81!Nr5a2;;chr18:3281034..3281104,-!p1@Crem!0.54!21.84!Crem;;chr2:90936901..90936945,+!p1@Sfpi1!0.54!16.23!Sfpi1;;chr10:57206224..57206260,+!p2@Hsf2!0.54!6.86!Hsf2;;chr16:55822638..55822669,-!p3@Nfkbiz!0.54!4.06!Nfkbiz;;chr14:32979290..32979309,+!p3@Gm6768,p3@Ncoa4!0.54!3.12!Ncoa4;;chr13:37918684..37918701,+!p12@Rreb1!0.54!3.12!Rreb1;;chr8:124984566..124984595,-!p1@Snai3!0.53!4.06!Snai3;;chr1:133904946..133904974,+!p7@Elk4!0.53!4.06!Elk4;;chr1:52176315..52176343,+!p1@Stat1!0.52!42.75!Stat1;;chr2:90936947..90936977,+!p2@Sfpi1!0.52!5.30!Sfpi1;;chr11:90250944..90250982,-!p2@Hlf!0.52!4.37!Hlf;;chr16:43363190..43363242,+!p2@Zbtb20!0.51!8.43!Zbtb20;;chr16:42907676..42907797,+!p1@Zbtb20!0.50!36.82!Zbtb20;;chr9:32443818..32443854,+!p2@Ets1!0.50!12.17!Ets1;;chr17:87153462..87153473,+!p3@Epas1!0.50!10.30!Epas1;;chr13:37949830..37949861,+!p7@Rreb1!0.50!4.68!Rreb1;;chr2:160698668..160698679,-!p4@Zhx3!0.50!4.68!Zhx3;;chr1:138846009..138846038,-!p3@Nr5a2!0.50!2.50!Nr5a2;;chr1:169548377..169548430,+!p1@Rxrg!0.50!2.18!Rxrg;;chr5:115421126..115421137,-!p4@Hnf1a!0.50!2.18!Hnf1a;;chr5:115420882..115420896,-!p3@Hnf1a!0.50!2.18!Hnf1a;;chr14:76887526..76887555,+!p10@Tsc22d1!0.50!2.18!Tsc22d1;;chr12:36219283..36219298,-!p2@Ahr!0.50!2.18!Ahr;;chr11:83664334..83664353,+!p2@Hnf1b!0.50!2.18!Hnf1b;;chr15:81633165..81633188,+!p2@Tef!0.49!22.78!Tef;;chr14:52640373..52640412,-!p1@Zfp219!0.49!15.91!Zfp219;;chr9:96619823..96619898,-!p2@Zbtb38!0.49!11.86!Zbtb38;;chr6:134780234..134780288,+!p1@Crebl2!0.49!8.43!Crebl2;;chr7:87170879..87170914,+!p2@Zfp710!0.49!5.93!Zfp710;;chr14:17407878..17407926,-!p1@Rarb!0.49!5.62!Rarb;;chr15:85566014..85566045,+!p3@Ppara!0.49!3.12!Ppara;;chr2:103143336..103143367,-!p1@Ehf!0.48!3.74!Ehf;;chr15:103085660..103085681,-!p1@Nfe2!0.48!3.43!Nfe2;;chr19:55816398..55816409,+!p5@Tcf7l2!0.47!12.17!Tcf7l2;;chr6:39068210..39068251,-!p1@Parp12!0.47!11.86!Parp12;;chr10:26093876..26093894,-!p2@L3mbtl3!0.47!5.62!L3mbtl3;;chr18:39648811..39648818,-!p4@Nr3c1!0.47!4.06!Nr3c1;;chr6:115311030..115311065,+!p4@Pparg!0.47!3.12!Pparg;;chr10:80889867..80889924,-!p1@Nfic!0.46!73.33!Nfic;;chr7:120351014..120351109,+!p1@Arntl!0.46!35.88!Arntl;;chrX:132420525..132420558,+!p3@Bhlhb9!0.46!10.61!Bhlhb9;;chr1:170362437..170362478,-!p5@Pbx1!0.46!7.49!Pbx1;;chr18:69681483..69681514,+!p11@Tcf4!0.46!3.74!Tcf4;;chrX:103070960..103070973,-!p7@Atrx!0.46!2.81!Atrx;;chr7:25917459..25917474,-!p2@Pou2f2!0.46!1.87!Pou2f2;;chr8:87425854..87425891,+!p1@Klf1!0.46!1.87!Klf1;;chr9:74714281..74714296,+!p5@Onecut1!0.46!1.87!Onecut1;;chr1:120524563..120524591,+!p2@Tfcp2l1!0.46!1.87!Tfcp2l1;;chr2:164228702..164228719,+!p1@Rbpjl!0.46!1.87!Rbpjl;;chr4:44723633..44723646,-!p3@Pax5!0.46!1.87!Pax5;;chrX:7544943..7545001,-!p1@Gata1!0.46!1.87!Gata1;;chr6:90416275..90416286,+!p9@Klf15!0.46!1.87!Klf15;;chr11:98407264..98407295,-!p1@Ikzf3!0.46!1.87!Ikzf3;;chr10:5734582..5734595,-!p10@Esr1!0.46!1.87!Esr1;;chr11:98407234..98407259,-!p2@Ikzf3!0.46!1.87!Ikzf3;;chr2:160192793..160192809,-!p1@Mafb!0.45!38.38!Mafb;;chr10:70700755..70700772,-!p2@Tfam!0.45!11.86!Tfam;;chr1:181733737..181733755,-!p2@Ahctf1!0.45!7.49!Ahctf1;;chr18:35020854..35020869,+!p1@Egr1!0.44!95.17!Egr1;;chr9:30838206..30838285,+!p2@Zbtb44!0.44!31.83!Zbtb44;;chr11:5420954..5420969,+!p2@Xbp1!0.44!30.58!Xbp1;;chr7:97591412..97591431,+!p2@Crebzf!0.44!5.93!Crebzf;;chr16:43363152..43363186,+!p3@Zbtb20!0.44!4.99!Zbtb20;;chr11:23670750..23670789,-!p2@Rel!0.44!4.06!Rel;;chr2:90936978..90937023,+!p3@Sfpi1!0.44!4.06!Sfpi1;;chr15:75799634..75799645,+!p4@Zfp707!0.44!2.18!Zfp707;;chr1:52065508..52065522,+!p2@Stat4!0.44!2.18!Stat4;;chr7:20408047..20408125,-!p1@Bcl3!0.43!27.15!Bcl3;;chr6:99216488..99216534,-!p2@Foxp1!0.43!6.24!Foxp1;;chr11:50745114..50745144,-!p1@Zfp354b!0.43!5.62!Zfp354b;;chr8:118231723..118231740,-!p1@Maf!0.42!52.73!Maf;;chrX:132420442..132420482,+!p2@Bhlhb9!0.42!11.86!Bhlhb9;;chr19:55816414..55816425,+!p4@Tcf7l2!0.42!11.86!Tcf7l2;;chr8:108583550..108583595,+!p2@Nfatc3!0.42!10.30!Nfatc3;;chr1:186556410..186556424,-!p1@Hlx!0.42!6.86!Hlx;;chr6:39068163..39068176,-!p2@Parp12!0.42!3.74!Parp12;;chr16:43363837..43363842,+!p11@Zbtb20!0.42!3.74!Zbtb20;;chr5:31262699..31262712,-!p2@Preb!0.42!3.12!Preb;;chr4:82151500..82151505,-!p11@Nfib!0.42!2.18!Nfib;;chr6:99470943..99471024,-!p3@Foxp1!0.41!21.84!Foxp1;;chr11:16908650..16908690,-!p1@Plek!0.41!13.73!Plek;;chr16:44173384..44173407,+!p2@Gm608!0.41!5.30!Gm608;;chr12:25257141..25257173,+!p1@Grhl1!0.41!4.06!Grhl1;;chr6:52114821..52114828,-!p1@Hoxa2!0.41!2.81!Hoxa2;;chr14:18493480..18493494,+!p2@Thrb!0.41!1.87!Thrb;;chr14:63890519..63890539,-!p3@Gata4!0.41!1.56!Gata4;;chr14:76888344..76888348,+!p26@Tsc22d1!0.41!1.56!Tsc22d1;;chr11:83666422..83666446,+!p4@Hnf1b!0.41!1.56!Hnf1b;;chr9:74714303..74714318,+!p2@Onecut1!0.41!1.56!Onecut1;;chr9:74709664..74709671,+!p6@Onecut1!0.41!1.56!Onecut1;;chr2:163332558..163332596,+!p2@Hnf4a!0.41!1.56!Hnf4a;;chr1:138846079..138846103,-!p6@Nr5a2!0.41!1.56!Nr5a2;;chr6:115311132..115311147,+!p9@Pparg!0.41!1.56!Pparg;;chr7:122989632..122989668,-!p2@Sox6!0.41!1.56!Sox6;;chr9:69137672..69137702,+!p2@Rora!0.40!9.05!Rora;;chr2:90922554..90922575,+!p4@Sfpi1!0.40!3.43!Sfpi1;;chr1:87546583..87546595,+!p1@Sp100!0.40!2.50!Sp100;;chr6:16848395..16848416,-!p2@Tfec!0.40!1.87!Tfec;;chr10:57206160..57206220,+!p1@Hsf2!0.39!23.71!Hsf2;;chr8:118231678..118231692,-!p2@Maf!0.39!19.66!Maf;;chr11:90252223..90252240,-!p1@Hlf!0.39!17.79!Hlf;;chr16:95680889..95680991,-!p1@Erg!0.39!17.47!Erg;;chr4:126703093..126703158,+!p3@Sfpq!0.39!5.62!Sfpq;;chr4:6917971..6918000,-!p3@Tox!0.39!3.74!Tox;;chr8:47825203..47825225,+!p3@Irf2!0.39!2.18!Irf2;;chr6:108610610..108610676,+!p1@Bhlhe40!0.38!106.40!Bhlhe40;;chr2:160698721..160698745,-!p1@Zhx3!0.38!30.27!Zhx3;;chr4:32325688..32325777,+!p1@Bach2!0.38!18.41!Bach2;;chrX:7339938..7339963,+!p1@Tfe3!0.38!10.30!Tfe3;;chr2:153475210..153475252,+!p2@Dnmt3b!0.38!5.30!Dnmt3b;;chr4:114732112..114732158,+!p1@Tal1!0.38!4.06!Tal1;;chr2:153475381..153475419,+!p3@Dnmt3b!0.38!3.74!Dnmt3b;;chr11:52096066..52096081,-!p2@Tcf7!0.38!1.87!Tcf7;;chr11:53583544..53583559,+!p1@Irf1!0.37!34.95!Irf1;;chr5:120121020..120121049,+!p1@Tbx3!0.37!12.48!Tbx3;;chr7:17200019..17200060,-!p4@Grlf1!0.37!8.74!Grlf1;;chr16:43619101..43619151,+!p6@Zbtb20!0.37!4.37!Zbtb20;;chrX:137135036..137135064,-!p4@Tsc22d3!0.37!3.43!Tsc22d3;;chr8:72663049..72663061,-!p4@LOC100048268,p4@Rfxank!0.37!3.12!Rfxank;;chr10:67599375..67599386,-!p3@Arid5b!0.37!3.12!Arid5b;;chr3:135271185..135271254,-!p4@Nfkb1!0.37!3.12!Nfkb1;;chr4:122911056..122911065,+!p2@Heyl!0.37!2.50!Heyl;;chrX:103070746..103070764,-!p5@Atrx!0.37!2.50!Atrx;;chr9:32503590..32503680,+!p1@Ets1!0.36!75.83!Ets1;;chr3:95021853..95021911,-!p1@Gabpb2!0.36!15.60!Gabpb2;;chr19:5637528..5637548,+!p2@Rela!0.36!11.55!Rela;;chr5:120121446..120121461,+!p2@Tbx3!0.36!6.24!Tbx3;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.36!5.30!Tfcp2l1;;chr15:10391745..10391753,-!p3@Dnajc21!0.36!1.87!Dnajc21;;chr9:96159225..96159249,+!p5@Tfdp2!0.36!1.56!Tfdp2;;chr8:118231705..118231722,-!p3@Maf!0.35!15.60!Maf;;chr8:123260252..123260264,+!p1@Irf8!0.35!13.73!Irf8;;chr2:44968737..44968758,-!p2@Zeb2!0.35!10.92!Zeb2;;chr1:133904901..133904934,+!p3@Elk4!0.35!5.30!Elk4;;chr19:26681226..26681299,+!p7@Smarca2!0.35!4.06!Smarca2;;chr12:72149359..72149406,+!p4@Arid4a!0.35!1.87!Arid4a;;chr16:91270004..91270023,+!p1@Olig1!0.35!1.56!Olig1;;chr14:63890491..63890516,-!p2@Gata4!0.35!1.25!Gata4;;chr14:17408022..17408043,-!p6@Rarb!0.35!1.25!Rarb;;chr14:17407857..17407875,-!p4@Rarb!0.35!1.25!Rarb;;chr1:52065530..52065548,+!p3@Stat4!0.35!1.25!Stat4;;chr6:16848443..16848459,-!p3@Tfec!0.35!1.25!Tfec;;chr11:100721492..100721499,+!p5@Stat5a!0.35!1.25!Stat5a;;chr11:78317000..78317005,+!p1@Sebox!0.35!1.25!Sebox;;chr11:96976641..96976646,-!p1@Tbx21!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0103,-!p6@Gtf2i!0.12!0.31!Gtf2i;;chr5:122500227..122500240,-!p6@Cux2!0.12!0.31!Cux2;;chr7:122989676..122989687,-!p8@Sox6!0.12!0.31!Sox6;;chr5:120120708..120120713,+!p12@Tbx3!0.12!0.31!Tbx3;;chr7:119885584..119885594,+!p8@Tead1!0.12!0.31!Tead1;;chr6:99216360..99216372,-!p8@Foxp1!0.12!0.31!Foxp1;;chr16:43247391..43247422,+!p12@Zbtb20!0.12!0.31!Zbtb20;;chr19:43686789..43686811,+!p1@Nkx2-3!0.12!0.31!Nkx2-3;;chr17:14011545..14011564,+!p6@Mllt4!0.12!0.31!Mllt4;;chr17:28409136..28409150,+!p3@Ppard!0.12!0.31!Ppard;;chr16:55838779..55838788,-!p9@Nfkbiz!0.12!0.31!Nfkbiz;;chr16:43236088..43236099,+!p43@Zbtb20!0.12!0.31!Zbtb20;;chr16:92826338..92826347,-!p6@Runx1!0.12!0.31!Runx1;;chr19:55967419..55967424,+!p19@Tcf7l2!0.12!0.31!Tcf7l2;;chr16:91269972..91269978,+!p3@Olig1!0.12!0.31!Olig1;;chr16:43364258..43364270,+!p27@Zbtb20!0.12!0.31!Zbtb20;;chr18:5591424..5591444,+!p5@Zeb1!0.12!0.31!Zeb1;;chr16:91270091..91270143,+!p2@Olig1!0.12!0.31!Olig1;;chr17:71201226..71201233,-!p16@Tgif1!0.12!0.31!Tgif1;;chr16:25802129..25802142,+!p3@Trp63!0.12!0.31!Trp63;;chr16:25684232..25684285,+!p2@Trp63!0.12!0.31!Trp63;;chr16:43236037..43236050,+!p35@Zbtb20!0.12!0.31!Zbtb20;;chr16:43235969..43235989,+!p20@Zbtb20!0.12!0.31!Zbtb20;;chr17:47906140..47906150,+!p6@Tfeb!0.12!0.31!Tfeb;;chr16:55819071..55819073,-!p11@Nfkbiz!0.12!0.31!Nfkbiz;;chr4:107107224..107107259,+!p2@Glis1!0.12!0.31!Glis1;;chr3:130815382..130815401,+!p14@Lef1!0.12!0.31!Lef1;;chr4:102792066..102792069,+!p14@Mier1!0.12!0.31!Mier1;;chr4:114732159..114732166,+!p6@Tal1!0.12!0.31!Tal1;;chr4:87452167..87452178,-!p8@Mllt3!0.12!0.31!Mllt3;;chr3:98186461..98186476,+!p2@Zfp697!0.12!0.31!Zfp697;;chr4:134676555..134676575,+!p2@Runx3!0.12!0.31!Runx3;;chr3:29911926..29911942,-!p13@Mecom!0.12!0.31!Mecom;;chr3:135257370..135257389,-!p9@Nfkb1!0.12!0.31!Nfkb1;;chr3:66785181..66785199,-!p2@Shox2!0.12!0.31!Shox2;;chr4:135728473..135728494,+!p5@E2f2!0.12!0.31!E2f2;;chr4:139389439..139389450,-!p3@Pax7!0.12!0.31!Pax7;;chr4:46356509..46356527,+!p1@Foxe1!0.12!0.31!Foxe1;;chr3:3508005..3508021,+!p3@Hnf4g!0.12!0.31!Hnf4g;;chr3:29911808..29911833,-!p8@Mecom!0.12!0.31!Mecom;;chr4:48063649..48063653,+!p14@Nr4a3!0.12!0.31!Nr4a3;;chr2:75543089..75543122,-!p3@Nfe2l2!0.12!0.31!Nfe2l2;;chr2:90936867..90936874,+!p7@Sfpi1!0.12!0.31!Sfpi1;;chr16:55822241..55822258,-!p1@Nfkbiz!0.11!35.88!Nfkbiz;;chr5:145992579..145992623,+!p1@Zfp655!0.11!34.64!Zfp655;;chr2:18314363..18314465,-!p1@Dnajc1!0.11!28.08!Dnajc1;;chr8:87324243..87324277,-!p1@Nfix!0.11!27.46!Nfix;;chr10:80893549..80893590,-!p2@Nfic!0.11!12.48!Nfic;;chr18:55152206..55152251,-!p1@Zfp608!0.11!10.61!Zfp608;;chr17:47873985..47874056,+!p1@Tfeb!0.11!8.74!Tfeb;;chr11:58717675..58717719,-!p1@Zfp39!0.11!7.49!Zfp39;;chr2:169956656..169956684,-!p1@Zfp217!0.11!7.18!Zfp217;;chr4:116480179..116480222,-!p2@Toe1!0.11!5.62!Toe1;;chr8:72663098..72663160,-!p2@LOC100048268,p2@Rfxank!0.11!4.99!Rfxank;;chr6:37392159..37392172,-!p2@Creb3l2!0.11!4.68!Creb3l2;;chr4:82151622..82151643,-!p4@Nfib!0.11!4.06!Nfib;;chr9:20297135..20297154,-!p2@Zfp426!0.11!3.43!Zfp426;;chr13:67274092..67274140,+!p1@Rsl1!0.11!3.43!Rsl1;;chr7:134489096..134489123,-!p2@Zfp768!0.11!2.81!Zfp768;;chr2:91077124..91077146,-!p3@Ddb2!0.11!2.18!Ddb2;;chr10:67000609..67000625,+!p1@Egr2!0.11!1.87!Egr2;;chr5:145962744..145962760,-!p2@Zkscan14!0.11!1.56!Zkscan14;;chr4:149943593..149943605,+!p5@Rere!0.11!1.25!Rere;;chr3:30993616..30993634,+!p3@Skil!0.11!1.25!Skil;;chr3:51144477..51144506,-!p6@Elf2!0.11!0.94!Elf2;;chr5:138187411..138187422,+!p8@Tsc22d4!0.11!0.94!Tsc22d4;;chr7:148513548..148513560,-!p7@Deaf1!0.11!0.94!Deaf1;; | |expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!2.15!162.88!Creb3l3;;chr1:173144144..173144176,+!p1@Nr1i3!2.13!135.42!Nr1i3;;chr7:19608891..19608895,-!p1@Foxa3!2.06!144.79!Foxa3;;chr2:163372884..163372904,+!p1@Hnf4a!1.90!77.70!Hnf4a;;chr1:173144100..173144138,+!p2@Nr1i3!1.88!74.58!Nr1i3;;chr9:74709695..74709722,+!p1@Onecut1!1.87!73.02!Onecut1;;chr4:133109285..133109308,+!p1@Nr0b2!1.83!67.09!Nr0b2;;chr5:135582751..135582788,+!p1@Mlxipl!1.75!213.43!Mlxipl;;chr10:88996295..88996335,-!p3@Nr1h4!1.75!65.84!Nr1h4;;chr10:88969376..88969395,-!p1@Nr1h4!1.75!55.54!Nr1h4;;chr15:85566184..85566238,+!p1@Ppara!1.74!78.95!Ppara;;chr16:38294860..38294924,-!p1@Nr1i2!1.73!52.11!Nr1i2;;chr10:88996336..88996380,-!p2@Nr1h4!1.70!60.22!Nr1h4;;chr15:85566537..85566552,+!p2@Ppara!1.58!36.82!Ppara;;chr15:85602655..85602680,+!p5@Ppara!1.56!35.57!Ppara;;chr11:90249521..90249551,-!p3@Hlf!1.56!35.57!Hlf;;chr18:64499674..64499696,+!p1@Onecut2!1.38!39.32!Onecut2;;chr2:147872790..147872821,-!p2@Foxa2!1.33!20.59!Foxa2;;chr4:32334732..32334739,+!p7@Bach2!1.33!20.28!Bach2;;chr13:31650185..31650201,+!p1@Foxq1!1.32!67.71!Foxq1;;chr19:37509324..37509337,+!p1@Hhex!1.30!130.43!Hhex;;chr2:163372869..163372882,+!p3@Hnf4a!1.29!18.41!Hnf4a;;chr18:64499706..64499721,+!p2@Onecut2!1.26!24.03!Onecut2;;chr10:22539932..22539956,-!p1@Tcf21!1.24!43.69!Tcf21;;chr14:63864056..63864102,-!p1@Gata4!1.24!28.40!Gata4;;chr2:77357622..77357704,-!p1@Zfp385b!1.20!39.94!Zfp385b;;chr2:173044380..173044432,-!p1@Zbp1!1.18!33.39!Zbp1;;chr15:85566241..85566253,+!p6@Ppara!1.18!14.04!Ppara;;chr1:191994550..191994623,-!p1@Prox1!1.17!93.92!Prox1;;chr11:121380640..121380655,-!p1@Zfp750!1.13!20.91!Zfp750;;chr11:100683839..100683890,-!p2@Stat5b!1.12!28.71!Stat5b;;chr10:88145766..88145770,-!p1@Spic!1.12!15.91!Spic;;chr11:83664365..83664383,+!p1@Hnf1b!1.12!12.17!Hnf1b;;chr5:115421065..115421088,-!p1@Hnf1a!1.11!11.86!Hnf1a;;chr8:59799772..59799789,+!p1@Hand2!1.10!33.70!Hand2;;chr6:90415250..90415271,+!p4@Klf15!1.09!11.23!Klf15;;chr1:191993385..191993405,-!p3@Prox1!1.09!11.23!Prox1;;chr15:103164702..103164778,-!p3@Zfp385a!1.08!13.11!Zfp385a;;chr3:94176733..94176794,+!p1@Rorc!1.05!79.88!Rorc;;chr1:138857048..138857071,-!p2@Nr5a2!1.05!10.30!Nr5a2;;chr1:138857076..138857105,-!p1@Nr5a2!1.05!10.30!Nr5a2;;chr11:60023912..60023930,-!p1@Srebf1!1.04!242.45!Srebf1;;chr7:52071956..52071978,-!p1@Atf5!1.03!316.09!Atf5;;chr7:35904304..35904320,+!p1@Cebpa!1.03!200.33!Cebpa;;chr14:100683884..100683908,-!p4@Klf12!1.03!18.41!Klf12;;chr10:5734677..5734702,-!p4@Esr1!1.03!9.67!Esr1;;chr2:91034924..91034946,-!p2@Nr1h3!1.02!11.86!Nr1h3;;chr9:24578720..24578735,-!p1@Tbx20!1.02!9.36!Tbx20;;chr15:85566051..85566080,+!p4@Ppara!1.00!10.61!Ppara;;chr2:147871627..147871641,-!p1@Foxa2!0.99!8.74!Foxa2;;chr10:88996274..88996286,-!p4@Nr1h4!0.97!8.43!Nr1h4;;chr2:91035254..91035271,-!p3@Nr1h3!0.96!10.30!Nr1h3;;chr1:138857112..138857130,-!p7@Nr5a2!0.96!8.11!Nr5a2;;chr17:87153519..87153533,+!p5@Epas1!0.95!11.86!Epas1;;chr10:80555299..80555306,-!p3@Creb3l3!0.94!7.80!Creb3l3;;chr10:5734660..5734670,-!p7@Esr1!0.94!7.80!Esr1;;chr3:102768047..102768060,-!p1@Nr1h5!0.93!7.49!Nr1h5;;chr16:38294929..38294940,-!p2@Nr1i2!0.93!7.49!Nr1i2;;chr2:173044357..173044377,-!p2@Zbp1!0.91!10.30!Zbp1;;chr2:148506935..148506954,+!p2@Gzf1!0.90!14.35!Gzf1;;chr9:69137716..69137744,+!p1@Rora!0.89!44.31!Rora;;chr2:27532479..27532509,+!p3@Rxra!0.87!13.73!Rxra;;chr15:85602581..85602598,+!p8@Ppara!0.86!6.24!Ppara;;chr10:80555398..80555409,-!p2@Creb3l3!0.86!6.24!Creb3l3;;chr10:80555285..80555291,-!p4@Creb3l3!0.84!5.93!Creb3l3;;chr4:44723559..44723593,-!p1@Pax5!0.84!5.93!Pax5;;chr1:13364477..13364492,-!p6@Ncoa2!0.83!7.18!Ncoa2;;chr2:27531961..27531974,+!p7@Rxra!0.82!5.62!Rxra;;chr2:160698288..160698358,-!p3@Zhx3!0.81!17.79!Zhx3;;chr1:138845748..138845766,-!p4@Nr5a2!0.81!7.18!Nr5a2;;chr9:51021788..51021802,+!p1@Pou2af1!0.81!6.55!Pou2af1;;chr14:100683912..100683947,-!p2@Klf12!0.80!17.47!Klf12;;chr8:87643578..87643593,-!p1@Zfp791!0.80!11.55!Zfp791;;chr7:51787434..51787448,-!p1@Spib!0.80!7.80!Spib;;chr9:74709682..74709691,+!p3@Onecut1!0.80!5.30!Onecut1;;chr2:91035197..91035237,-!p1@Nr1h3!0.79!11.23!Nr1h3;;chr12:58646974..58647003,-!p1@Foxa1!0.78!6.86!Foxa1;;chr6:15135639..15135655,+!p9@Foxp2!0.78!6.24!Foxp2;;chr8:73905892..73905903,-!p5@Nr2f6!0.78!5.93!Nr2f6;;chr10:5734907..5734920,-!p11@Esr1!0.78!4.99!Esr1;;chr12:36219645..36219730,-!p1@Ahr!0.77!52.42!Ahr;;chr10:82226649..82226694,-!p2@Nfyb!0.76!33.08!Nfyb;;chr2:38206744..38206766,+!p1@Lhx2!0.76!5.93!Lhx2;;chr11:121380594..121380609,-!p2@Zfp750!0.75!8.43!Zfp750;;chr2:38206580..38206600,+!p2@Lhx2!0.75!5.93!Lhx2;;chr19:37511111..37511115,+!p2@Hhex!0.75!4.68!Hhex;;chr10:5734525..5734569,-!p3@Esr1!0.74!7.80!Esr1;;chr17:87153505..87153516,+!p6@Epas1!0.73!6.24!Epas1;;chr6:16848347..16848391,-!p1@Tfec!0.73!5.93!Tfec;;chr15:85565338..85565355,+!p7@Ppara!0.73!4.37!Ppara;;chr3:3508024..3508069,+!p2@Hnf4g!0.73!4.37!Hnf4g;;chr6:144730427..144730508,-!p1@Sox5!0.71!28.71!Sox5;;chr14:100683672..100683717,-!p1@Klf12!0.71!21.53!Klf12;;chr6:134780337..134780355,+!p3@Crebl2!0.71!5.62!Crebl2;;chr19:10315179..10315241,-!p1@Gm98!0.70!47.12!Gm98;;chr11:121380611..121380625,-!p3@Zfp750!0.70!4.99!Zfp750;;chr13:83643159..83643226,+!p3@Mef2c!0.70!4.06!Mef2c;;chr1:38721792..38721845,-!p1@Aff3!0.69!4.99!Aff3;;chr17:87153028..87153049,+!p2@Epas1!0.68!89.87!Epas1;;chr7:148452314..148452329,-!p1@Irf7!0.68!29.96!Irf7;;chr13:30841099..30841116,+!p1@Irf4!0.68!6.24!Irf4;;chr6:90415281..90415295,+!p5@Klf15!0.68!3.74!Klf15;;chr10:5734717..5734727,-!p12@Esr1!0.68!3.74!Esr1;;chr10:82226613..82226641,-!p4@Nfyb!0.67!11.23!Nfyb;;chr2:27532754..27532815,+!p1@Rxra!0.66!121.38!Rxra;;chr1:191994700..191994711,-!p4@Prox1!0.65!3.43!Prox1;;chr4:44723520..44723544,-!p2@Pax5!0.65!3.43!Pax5;;chr11:100720767..100720797,+!p4@Stat5a!0.65!3.43!Stat5a;;chr8:79426176..79426275,+!p1@Nr3c2!0.64!19.66!Nr3c2;;chr6:108610766..108610781,+!p2@Bhlhe40!0.64!6.55!Bhlhe40;;chr6:90412582..90412601,+!p1@Klf15!0.63!17.79!Klf15;;chr17:87153240..87153254,+!p1@Epas1!0.62!74.89!Epas1;;chr14:17407970..17408015,-!p2@Rarb!0.62!9.67!Rarb;;chr8:123608252..123608268,+!p1@Foxf1a!0.62!4.99!Foxf1a;;chr2:27532513..27532525,+!p8@Rxra!0.62!3.74!Rxra;;chr2:133377954..133377973,+!p1@Bmp2!0.61!11.55!Bmp2;;chr6:144157924..144157955,-!p2@Sox5!0.61!4.06!Sox5;;chr14:18493386..18493464,+!p1@Thrb!0.60!13.42!Thrb;;chr4:6917921..6917970,-!p2@Tox!0.60!9.67!Tox;;chr11:53583960..53584007,+!p2@Irf1!0.60!7.18!Irf1;;chr9:96159147..96159204,+!p2@Tfdp2!0.60!6.24!Tfdp2;;chr4:97444471..97444514,+!p1@Nfia!0.59!92.99!Nfia;;chr10:127707602..127707633,+!p1@Stat2!0.59!30.89!Stat2;;chr11:11586218..11586285,+!p1@Ikzf1!0.59!10.92!Ikzf1;;chr18:36441119..36441158,+!p2@Pura!0.59!8.11!Pura;;chr6:115310872..115310899,+!p2@Pparg!0.59!5.62!Pparg;;chr2:153475178..153475196,+!p1@Dnmt3b!0.58!6.86!Dnmt3b;;chr1:194979361..194979373,+!p2@Irf6!0.58!4.06!Irf6;;chr2:147871948..147871977,-!p3@Foxa2!0.58!2.81!Foxa2;;chr8:91568074..91568094,-!p1@Sall1!0.58!2.81!Sall1;;chr11:60036258..60036276,-!p3@Srebf1!0.57!5.30!Srebf1;;chr1:194979315..194979359,+!p1@Irf6!0.56!19.66!Irf6;;chr3:95238432..95238455,+!p2@Arnt!0.56!18.41!Arnt;;chr1:186556375..186556404,-!p3@Hlx!0.56!5.30!Hlx;;chr18:11052606..11052633,+!p4@Gata6!0.55!7.49!Gata6;;chr1:138846047..138846074,-!p5@Nr5a2!0.55!2.81!Nr5a2;;chr18:3281034..3281104,-!p1@Crem!0.54!21.84!Crem;;chr2:90936901..90936945,+!p1@Sfpi1!0.54!16.23!Sfpi1;;chr10:57206224..57206260,+!p2@Hsf2!0.54!6.86!Hsf2;;chr16:55822638..55822669,-!p3@Nfkbiz!0.54!4.06!Nfkbiz;;chr14:32979290..32979309,+!p3@Gm6768,p3@Ncoa4!0.54!3.12!Ncoa4;;chr13:37918684..37918701,+!p12@Rreb1!0.54!3.12!Rreb1;;chr8:124984566..124984595,-!p1@Snai3!0.53!4.06!Snai3;;chr1:133904946..133904974,+!p7@Elk4!0.53!4.06!Elk4;;chr1:52176315..52176343,+!p1@Stat1!0.52!42.75!Stat1;;chr2:90936947..90936977,+!p2@Sfpi1!0.52!5.30!Sfpi1;;chr11:90250944..90250982,-!p2@Hlf!0.52!4.37!Hlf;;chr16:43363190..43363242,+!p2@Zbtb20!0.51!8.43!Zbtb20;;chr16:42907676..42907797,+!p1@Zbtb20!0.50!36.82!Zbtb20;;chr9:32443818..32443854,+!p2@Ets1!0.50!12.17!Ets1;;chr17:87153462..87153473,+!p3@Epas1!0.50!10.30!Epas1;;chr13:37949830..37949861,+!p7@Rreb1!0.50!4.68!Rreb1;;chr2:160698668..160698679,-!p4@Zhx3!0.50!4.68!Zhx3;;chr1:138846009..138846038,-!p3@Nr5a2!0.50!2.50!Nr5a2;;chr1:169548377..169548430,+!p1@Rxrg!0.50!2.18!Rxrg;;chr5:115421126..115421137,-!p4@Hnf1a!0.50!2.18!Hnf1a;;chr5:115420882..115420896,-!p3@Hnf1a!0.50!2.18!Hnf1a;;chr14:76887526..76887555,+!p10@Tsc22d1!0.50!2.18!Tsc22d1;;chr12:36219283..36219298,-!p2@Ahr!0.50!2.18!Ahr;;chr11:83664334..83664353,+!p2@Hnf1b!0.50!2.18!Hnf1b;;chr15:81633165..81633188,+!p2@Tef!0.49!22.78!Tef;;chr14:52640373..52640412,-!p1@Zfp219!0.49!15.91!Zfp219;;chr9:96619823..96619898,-!p2@Zbtb38!0.49!11.86!Zbtb38;;chr6:134780234..134780288,+!p1@Crebl2!0.49!8.43!Crebl2;;chr7:87170879..87170914,+!p2@Zfp710!0.49!5.93!Zfp710;;chr14:17407878..17407926,-!p1@Rarb!0.49!5.62!Rarb;;chr15:85566014..85566045,+!p3@Ppara!0.49!3.12!Ppara;;chr2:103143336..103143367,-!p1@Ehf!0.48!3.74!Ehf;;chr15:103085660..103085681,-!p1@Nfe2!0.48!3.43!Nfe2;;chr19:55816398..55816409,+!p5@Tcf7l2!0.47!12.17!Tcf7l2;;chr6:39068210..39068251,-!p1@Parp12!0.47!11.86!Parp12;;chr10:26093876..26093894,-!p2@L3mbtl3!0.47!5.62!L3mbtl3;;chr18:39648811..39648818,-!p4@Nr3c1!0.47!4.06!Nr3c1;;chr6:115311030..115311065,+!p4@Pparg!0.47!3.12!Pparg;;chr10:80889867..80889924,-!p1@Nfic!0.46!73.33!Nfic;;chr7:120351014..120351109,+!p1@Arntl!0.46!35.88!Arntl;;chrX:132420525..132420558,+!p3@Bhlhb9!0.46!10.61!Bhlhb9;;chr1:170362437..170362478,-!p5@Pbx1!0.46!7.49!Pbx1;;chr18:69681483..69681514,+!p11@Tcf4!0.46!3.74!Tcf4;;chrX:103070960..103070973,-!p7@Atrx!0.46!2.81!Atrx;;chr7:25917459..25917474,-!p2@Pou2f2!0.46!1.87!Pou2f2;;chr8:87425854..87425891,+!p1@Klf1!0.46!1.87!Klf1;;chr9:74714281..74714296,+!p5@Onecut1!0.46!1.87!Onecut1;;chr1:120524563..120524591,+!p2@Tfcp2l1!0.46!1.87!Tfcp2l1;;chr2:164228702..164228719,+!p1@Rbpjl!0.46!1.87!Rbpjl;;chr4:44723633..44723646,-!p3@Pax5!0.46!1.87!Pax5;;chrX:7544943..7545001,-!p1@Gata1!0.46!1.87!Gata1;;chr6:90416275..90416286,+!p9@Klf15!0.46!1.87!Klf15;;chr11:98407264..98407295,-!p1@Ikzf3!0.46!1.87!Ikzf3;;chr10:5734582..5734595,-!p10@Esr1!0.46!1.87!Esr1;;chr11:98407234..98407259,-!p2@Ikzf3!0.46!1.87!Ikzf3;;chr2:160192793..160192809,-!p1@Mafb!0.45!38.38!Mafb;;chr10:70700755..70700772,-!p2@Tfam!0.45!11.86!Tfam;;chr1:181733737..181733755,-!p2@Ahctf1!0.45!7.49!Ahctf1;;chr18:35020854..35020869,+!p1@Egr1!0.44!95.17!Egr1;;chr9:30838206..30838285,+!p2@Zbtb44!0.44!31.83!Zbtb44;;chr11:5420954..5420969,+!p2@Xbp1!0.44!30.58!Xbp1;;chr7:97591412..97591431,+!p2@Crebzf!0.44!5.93!Crebzf;;chr16:43363152..43363186,+!p3@Zbtb20!0.44!4.99!Zbtb20;;chr11:23670750..23670789,-!p2@Rel!0.44!4.06!Rel;;chr2:90936978..90937023,+!p3@Sfpi1!0.44!4.06!Sfpi1;;chr15:75799634..75799645,+!p4@Zfp707!0.44!2.18!Zfp707;;chr1:52065508..52065522,+!p2@Stat4!0.44!2.18!Stat4;;chr7:20408047..20408125,-!p1@Bcl3!0.43!27.15!Bcl3;;chr6:99216488..99216534,-!p2@Foxp1!0.43!6.24!Foxp1;;chr11:50745114..50745144,-!p1@Zfp354b!0.43!5.62!Zfp354b;;chr8:118231723..118231740,-!p1@Maf!0.42!52.73!Maf;;chrX:132420442..132420482,+!p2@Bhlhb9!0.42!11.86!Bhlhb9;;chr19:55816414..55816425,+!p4@Tcf7l2!0.42!11.86!Tcf7l2;;chr8:108583550..108583595,+!p2@Nfatc3!0.42!10.30!Nfatc3;;chr1:186556410..186556424,-!p1@Hlx!0.42!6.86!Hlx;;chr6:39068163..39068176,-!p2@Parp12!0.42!3.74!Parp12;;chr16:43363837..43363842,+!p11@Zbtb20!0.42!3.74!Zbtb20;;chr5:31262699..31262712,-!p2@Preb!0.42!3.12!Preb;;chr4:82151500..82151505,-!p11@Nfib!0.42!2.18!Nfib;;chr6:99470943..99471024,-!p3@Foxp1!0.41!21.84!Foxp1;;chr11:16908650..16908690,-!p1@Plek!0.41!13.73!Plek;;chr16:44173384..44173407,+!p2@Gm608!0.41!5.30!Gm608;;chr12:25257141..25257173,+!p1@Grhl1!0.41!4.06!Grhl1;;chr6:52114821..52114828,-!p1@Hoxa2!0.41!2.81!Hoxa2;;chr14:18493480..18493494,+!p2@Thrb!0.41!1.87!Thrb;;chr14:63890519..63890539,-!p3@Gata4!0.41!1.56!Gata4;;chr14:76888344..76888348,+!p26@Tsc22d1!0.41!1.56!Tsc22d1;;chr11:83666422..83666446,+!p4@Hnf1b!0.41!1.56!Hnf1b;;chr9:74714303..74714318,+!p2@Onecut1!0.41!1.56!Onecut1;;chr9:74709664..74709671,+!p6@Onecut1!0.41!1.56!Onecut1;;chr2:163332558..163332596,+!p2@Hnf4a!0.41!1.56!Hnf4a;;chr1:138846079..138846103,-!p6@Nr5a2!0.41!1.56!Nr5a2;;chr6:115311132..115311147,+!p9@Pparg!0.41!1.56!Pparg;;chr7:122989632..122989668,-!p2@Sox6!0.41!1.56!Sox6;;chr9:69137672..69137702,+!p2@Rora!0.40!9.05!Rora;;chr2:90922554..90922575,+!p4@Sfpi1!0.40!3.43!Sfpi1;;chr1:87546583..87546595,+!p1@Sp100!0.40!2.50!Sp100;;chr6:16848395..16848416,-!p2@Tfec!0.40!1.87!Tfec;;chr10:57206160..57206220,+!p1@Hsf2!0.39!23.71!Hsf2;;chr8:118231678..118231692,-!p2@Maf!0.39!19.66!Maf;;chr11:90252223..90252240,-!p1@Hlf!0.39!17.79!Hlf;;chr16:95680889..95680991,-!p1@Erg!0.39!17.47!Erg;;chr4:126703093..126703158,+!p3@Sfpq!0.39!5.62!Sfpq;;chr4:6917971..6918000,-!p3@Tox!0.39!3.74!Tox;;chr8:47825203..47825225,+!p3@Irf2!0.39!2.18!Irf2;;chr6:108610610..108610676,+!p1@Bhlhe40!0.38!106.40!Bhlhe40;;chr2:160698721..160698745,-!p1@Zhx3!0.38!30.27!Zhx3;;chr4:32325688..32325777,+!p1@Bach2!0.38!18.41!Bach2;;chrX:7339938..7339963,+!p1@Tfe3!0.38!10.30!Tfe3;;chr2:153475210..153475252,+!p2@Dnmt3b!0.38!5.30!Dnmt3b;;chr4:114732112..114732158,+!p1@Tal1!0.38!4.06!Tal1;;chr2:153475381..153475419,+!p3@Dnmt3b!0.38!3.74!Dnmt3b;;chr11:52096066..52096081,-!p2@Tcf7!0.38!1.87!Tcf7;;chr11:53583544..53583559,+!p1@Irf1!0.37!34.95!Irf1;;chr5:120121020..120121049,+!p1@Tbx3!0.37!12.48!Tbx3;;chr7:17200019..17200060,-!p4@Grlf1!0.37!8.74!Grlf1;;chr16:43619101..43619151,+!p6@Zbtb20!0.37!4.37!Zbtb20;;chrX:137135036..137135064,-!p4@Tsc22d3!0.37!3.43!Tsc22d3;;chr8:72663049..72663061,-!p4@LOC100048268,p4@Rfxank!0.37!3.12!Rfxank;;chr10:67599375..67599386,-!p3@Arid5b!0.37!3.12!Arid5b;;chr3:135271185..135271254,-!p4@Nfkb1!0.37!3.12!Nfkb1;;chr4:122911056..122911065,+!p2@Heyl!0.37!2.50!Heyl;;chrX:103070746..103070764,-!p5@Atrx!0.37!2.50!Atrx;;chr9:32503590..32503680,+!p1@Ets1!0.36!75.83!Ets1;;chr3:95021853..95021911,-!p1@Gabpb2!0.36!15.60!Gabpb2;;chr19:5637528..5637548,+!p2@Rela!0.36!11.55!Rela;;chr5:120121446..120121461,+!p2@Tbx3!0.36!6.24!Tbx3;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.36!5.30!Tfcp2l1;;chr15:10391745..10391753,-!p3@Dnajc21!0.36!1.87!Dnajc21;;chr9:96159225..96159249,+!p5@Tfdp2!0.36!1.56!Tfdp2;;chr8:118231705..118231722,-!p3@Maf!0.35!15.60!Maf;;chr8:123260252..123260264,+!p1@Irf8!0.35!13.73!Irf8;;chr2:44968737..44968758,-!p2@Zeb2!0.35!10.92!Zeb2;;chr1:133904901..133904934,+!p3@Elk4!0.35!5.30!Elk4;;chr19:26681226..26681299,+!p7@Smarca2!0.35!4.06!Smarca2;;chr12:72149359..72149406,+!p4@Arid4a!0.35!1.87!Arid4a;;chr16:91270004..91270023,+!p1@Olig1!0.35!1.56!Olig1;;chr14:63890491..63890516,-!p2@Gata4!0.35!1.25!Gata4;;chr14:17408022..17408043,-!p6@Rarb!0.35!1.25!Rarb;;chr14:17407857..17407875,-!p4@Rarb!0.35!1.25!Rarb;;chr1:52065530..52065548,+!p3@Stat4!0.35!1.25!Stat4;;chr6:16848443..16848459,-!p3@Tfec!0.35!1.25!Tfec;;chr11:100721492..100721499,+!p5@Stat5a!0.35!1.25!Stat5a;;chr11:78317000..78317005,+!p1@Sebox!0.35!1.25!Sebox;;chr11:96976641..96976646,-!p1@Tbx21!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0103,-!p6@Gtf2i!0.12!0.31!Gtf2i;;chr5:122500227..122500240,-!p6@Cux2!0.12!0.31!Cux2;;chr7:122989676..122989687,-!p8@Sox6!0.12!0.31!Sox6;;chr5:120120708..120120713,+!p12@Tbx3!0.12!0.31!Tbx3;;chr7:119885584..119885594,+!p8@Tead1!0.12!0.31!Tead1;;chr6:99216360..99216372,-!p8@Foxp1!0.12!0.31!Foxp1;;chr16:43247391..43247422,+!p12@Zbtb20!0.12!0.31!Zbtb20;;chr19:43686789..43686811,+!p1@Nkx2-3!0.12!0.31!Nkx2-3;;chr17:14011545..14011564,+!p6@Mllt4!0.12!0.31!Mllt4;;chr17:28409136..28409150,+!p3@Ppard!0.12!0.31!Ppard;;chr16:55838779..55838788,-!p9@Nfkbiz!0.12!0.31!Nfkbiz;;chr16:43236088..43236099,+!p43@Zbtb20!0.12!0.31!Zbtb20;;chr16:92826338..92826347,-!p6@Runx1!0.12!0.31!Runx1;;chr19:55967419..55967424,+!p19@Tcf7l2!0.12!0.31!Tcf7l2;;chr16:91269972..91269978,+!p3@Olig1!0.12!0.31!Olig1;;chr16:43364258..43364270,+!p27@Zbtb20!0.12!0.31!Zbtb20;;chr18:5591424..5591444,+!p5@Zeb1!0.12!0.31!Zeb1;;chr16:91270091..91270143,+!p2@Olig1!0.12!0.31!Olig1;;chr17:71201226..71201233,-!p16@Tgif1!0.12!0.31!Tgif1;;chr16:25802129..25802142,+!p3@Trp63!0.12!0.31!Trp63;;chr16:25684232..25684285,+!p2@Trp63!0.12!0.31!Trp63;;chr16:43236037..43236050,+!p35@Zbtb20!0.12!0.31!Zbtb20;;chr16:43235969..43235989,+!p20@Zbtb20!0.12!0.31!Zbtb20;;chr17:47906140..47906150,+!p6@Tfeb!0.12!0.31!Tfeb;;chr16:55819071..55819073,-!p11@Nfkbiz!0.12!0.31!Nfkbiz;;chr4:107107224..107107259,+!p2@Glis1!0.12!0.31!Glis1;;chr3:130815382..130815401,+!p14@Lef1!0.12!0.31!Lef1;;chr4:102792066..102792069,+!p14@Mier1!0.12!0.31!Mier1;;chr4:114732159..114732166,+!p6@Tal1!0.12!0.31!Tal1;;chr4:87452167..87452178,-!p8@Mllt3!0.12!0.31!Mllt3;;chr3:98186461..98186476,+!p2@Zfp697!0.12!0.31!Zfp697;;chr4:134676555..134676575,+!p2@Runx3!0.12!0.31!Runx3;;chr3:29911926..29911942,-!p13@Mecom!0.12!0.31!Mecom;;chr3:135257370..135257389,-!p9@Nfkb1!0.12!0.31!Nfkb1;;chr3:66785181..66785199,-!p2@Shox2!0.12!0.31!Shox2;;chr4:135728473..135728494,+!p5@E2f2!0.12!0.31!E2f2;;chr4:139389439..139389450,-!p3@Pax7!0.12!0.31!Pax7;;chr4:46356509..46356527,+!p1@Foxe1!0.12!0.31!Foxe1;;chr3:3508005..3508021,+!p3@Hnf4g!0.12!0.31!Hnf4g;;chr3:29911808..29911833,-!p8@Mecom!0.12!0.31!Mecom;;chr4:48063649..48063653,+!p14@Nr4a3!0.12!0.31!Nr4a3;;chr2:75543089..75543122,-!p3@Nfe2l2!0.12!0.31!Nfe2l2;;chr2:90936867..90936874,+!p7@Sfpi1!0.12!0.31!Sfpi1;;chr16:55822241..55822258,-!p1@Nfkbiz!0.11!35.88!Nfkbiz;;chr5:145992579..145992623,+!p1@Zfp655!0.11!34.64!Zfp655;;chr2:18314363..18314465,-!p1@Dnajc1!0.11!28.08!Dnajc1;;chr8:87324243..87324277,-!p1@Nfix!0.11!27.46!Nfix;;chr10:80893549..80893590,-!p2@Nfic!0.11!12.48!Nfic;;chr18:55152206..55152251,-!p1@Zfp608!0.11!10.61!Zfp608;;chr17:47873985..47874056,+!p1@Tfeb!0.11!8.74!Tfeb;;chr11:58717675..58717719,-!p1@Zfp39!0.11!7.49!Zfp39;;chr2:169956656..169956684,-!p1@Zfp217!0.11!7.18!Zfp217;;chr4:116480179..116480222,-!p2@Toe1!0.11!5.62!Toe1;;chr8:72663098..72663160,-!p2@LOC100048268,p2@Rfxank!0.11!4.99!Rfxank;;chr6:37392159..37392172,-!p2@Creb3l2!0.11!4.68!Creb3l2;;chr4:82151622..82151643,-!p4@Nfib!0.11!4.06!Nfib;;chr9:20297135..20297154,-!p2@Zfp426!0.11!3.43!Zfp426;;chr13:67274092..67274140,+!p1@Rsl1!0.11!3.43!Rsl1;;chr7:134489096..134489123,-!p2@Zfp768!0.11!2.81!Zfp768;;chr2:91077124..91077146,-!p3@Ddb2!0.11!2.18!Ddb2;;chr10:67000609..67000625,+!p1@Egr2!0.11!1.87!Egr2;;chr5:145962744..145962760,-!p2@Zkscan14!0.11!1.56!Zkscan14;;chr4:149943593..149943605,+!p5@Rere!0.11!1.25!Rere;;chr3:30993616..30993634,+!p3@Skil!0.11!1.25!Skil;;chr3:51144477..51144506,-!p6@Elf2!0.11!0.94!Elf2;;chr5:138187411..138187422,+!p8@Tsc22d4!0.11!0.94!Tsc22d4;;chr7:148513548..148513560,-!p7@Deaf1!0.11!0.94!Deaf1;; | ||
|ffid_belonging_in_development=UBERON:0001041,UBERON:0002532,UBERON:0006595,UBERON:0003104,UBERON:0004161,UBERON:0009497,UBERON:0010316,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 38: | Line 44: | ||
|is_a=EFO:0002091;;FF:0011416 | |is_a=EFO:0002091;;FF:0011416 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11115 | |||
|library_id_phase_based=2:CNhs11115 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;751 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;751 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N10.CNhs11115.751-24B9.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N10.CNhs11115.751-24B9.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N10.CNhs11115.751-24B9.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N10.CNhs11115.751-24B9.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N10.CNhs11115.751-24B9.mm9.nobarcode.rdna.fa.gz | |||
|name=liver, neonate N10 | |name=liver, neonate N10 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 43: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11115,LSID734,release008,COMPLETED | |profile_hcage=CNhs11115,LSID734,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=0.309621626674781,0,0,0,0,0.117946305307076,0.327498749012386,0,0.0082716889057459,0,0,0.202591464974938,0,0,0,0,0,0,0.0187128228479983,0,0,0,0.351825418422672,0,0,0,0,0,0,0,0,0,0.443704052396548,0,0,0,0.799660323566278,0,-0.03341001628449,-0.0642983270704141,-0.0233371678777377,0.460383601989688,-0.269868638010351,0,0,0,0,0,0,0,0,0,0,0,0,0.22092515780804,0,0,0,0,-0.0237583952881394,0,0.0717419398884913,0,0,0,0.192527445792385,-0.0237199519679062,0.0525151309594904,0.0983435310688386,0,0.032918362238592,-0.0149871250073208,0,0,0,0,-0.228850584369725,0.348614269677482,0.0391147104671686,0,0,0,0,0,0,0.212971178032784,0.356494034113171,0.0171277031400809,0,0,0,0,0 | |||
|rna_box=24 | |rna_box=24 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 58: | Line 76: | ||
|rna_weight_ug= | |rna_weight_ug= | ||
|sample_age= | |sample_age= | ||
|sample_category=developmental | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 78: | Line 97: | ||
|top_motifs=FOXA2:3.44433004397;FOX{F1,F2,J1}:3.36728229519;NKX2-2,8:3.13623271465;NFIL3:2.62380505138;HNF1A:2.5679969769;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.35294057572;FOX{D1,D2}:2.21182965514;HNF4A_NR2F1,2:2.03554356432;CEBPA,B_DDIT3:1.97885628367;ONECUT1,2:1.73633611002;FOXM1:1.65181952235;STAT2,4,6:1.59090153617;NR6A1:1.56227373782;HLF:1.55743321793;RBPJ:1.43629269731;FOXD3:1.42913904954;ARID5B:1.37997482417;CUX2:1.12870993177;EVI1:1.10993079108;NR3C1:1.02605296162;IRF1,2:0.994900535787;GCM1,2:0.929229475714;NR1H4:0.919734872112;CDX1,2,4:0.905155409953;PITX1..3:0.814729596209;GZF1:0.808103085945;PAX1,9:0.80238378852;NFIX:0.771295203904;HMGA1,2:0.747888766246;EBF1:0.716693902983;FOXP1:0.675607252396;ALX4:0.662297669397;TP53:0.652640413983;PAX4:0.640991853815;POU3F1..4:0.638374846781;NKX3-2:0.616580377888;DBP:0.572305370608;HAND1,2:0.505627189845;NR5A1,2:0.491435690452;TLX1..3_NFIC{dimer}:0.351398621068;IRF7:0.333962784697;RORA:0.305747858507;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.296519032902;GATA6:0.289515394709;NANOG{mouse}:0.275950944446;RXRA_VDR{dimer}:0.275578544041;MYBL2:0.267506222101;SPIB:0.26729672961;ELF1,2,4:0.23850136591;FOXQ1:0.224792986952;SPI1:0.200591004871;TBP:0.173035971702;HOX{A4,D4}:0.172363931788;BPTF:0.165666744245;PBX1:0.152837531935;RXR{A,B,G}:0.127596062903;GATA4:0.126629968305;NFY{A,B,C}:0.125117976217;IKZF1:0.0580932642141;LEF1_TCF7_TCF7L1,2:0.0467763546735;NFE2:0.0316653200607;SOX5:0.0219467140182;ESRRA:0.00527991554052;ZNF423:-0.0058234084253;MYOD1:-0.0209564734825;SRF:-0.0263564558966;ETS1,2:-0.031476501119;MTF1:-0.0344032963419;SNAI1..3:-0.0386353506033;E2F1..5:-0.0480485056632;DMAP1_NCOR{1,2}_SMARC:-0.062743755932;TLX2:-0.0643003418117;UFEwm:-0.0643318878339;MEF2{A,B,C,D}:-0.0935610355736;STAT5{A,B}:-0.149025278169;HIF1A:-0.151723659365;ADNP_IRX_SIX_ZHX:-0.153631933877;bHLH_family:-0.16100263236;TAL1_TCF{3,4,12}:-0.161961297489;STAT1,3:-0.194293117757;ZBTB16:-0.19523094079;TEAD1:-0.243655539369;GFI1:-0.248733188448;SP1:-0.257870886208;AR:-0.259809116005;POU6F1:-0.259843024272;SMAD1..7,9:-0.26689627962;TFAP4:-0.277223384007;SREBF1,2:-0.287595438265;AIRE:-0.28827598681;YY1:-0.299645923322;GFI1B:-0.30760844155;FOXN1:-0.336601128096;FOSL2:-0.344121706518;IKZF2:-0.354984174888;RUNX1..3:-0.410332589561;ZEB1:-0.417574876278;TGIF1:-0.419775560425;FOXP3:-0.434265286277;T:-0.440732696639;HOXA9_MEIS1:-0.453627964477;MYFfamily:-0.458940021739;NFKB1_REL_RELA:-0.462431524068;TFCP2:-0.479727560324;XCPE1{core}:-0.479797948133;NHLH1,2:-0.481708004946;ZNF238:-0.504041860745;EN1,2:-0.51090478948;TEF:-0.531239959451;ELK1,4_GABP{A,B1}:-0.546629110734;ZBTB6:-0.569247343747;HSF1,2:-0.594428479674;MAZ:-0.598314532565;PATZ1:-0.609679828984;PAX5:-0.634202601849;MYB:-0.641010018774;ATF6:-0.652814741432;GTF2I:-0.665931743222;REST:-0.671663555163;PDX1:-0.673800011101;POU1F1:-0.694081091981;HOX{A5,B5}:-0.694374306774;ESR1:-0.701168441823;FOX{I1,J2}:-0.70428479588;LMO2:-0.70655114139;CREB1:-0.713298152237;HMX1:-0.714712402809;PAX2:-0.731429307364;BACH2:-0.747751652053;FOXL1:-0.748005212059;ZFP161:-0.756364925431;FOXO1,3,4:-0.781206819467;TOPORS:-0.785657451415;OCT4_SOX2{dimer}:-0.790096322591;NRF1:-0.790549124422;ZIC1..3:-0.791295123054;LHX3,4:-0.793328930768;HIC1:-0.794251925159;KLF4:-0.815973477451;PRDM1:-0.861121259559;ATF5_CREB3:-0.86467258534;SOX{8,9,10}:-0.866926798086;EGR1..3:-0.885824024299;MZF1:-0.890353122023;MTE{core}:-0.909693687903;CDC5L:-0.922074721348;NFE2L2:-0.92328617768;VSX1,2:-0.928983207709;PRRX1,2:-0.930322228307;MED-1{core}:-0.945829305082;FOS_FOS{B,L1}_JUN{B,D}:-0.955394309601;TFAP2{A,C}:-0.957651228839;GTF2A1,2:-0.970823614948;RREB1:-0.979881516305;ALX1:-1.00611317693;TFAP2B:-1.03809370207;NKX2-1,4:-1.04214466365;GLI1..3:-1.04375303157;AHR_ARNT_ARNT2:-1.088416277;PAX6:-1.12049339523;MAFB:-1.12526651673;ZNF143:-1.13843030612;BREu{core}:-1.15779129246;ZNF384:-1.16430098612;NFATC1..3:-1.17508167765;NKX2-3_NKX2-5:-1.19860527268;RFX1:-1.20299960361;NFE2L1:-1.21997286473;ATF2:-1.27010521831;ZNF148:-1.32056845187;SOX17:-1.33181869791;TFDP1:-1.37961144809;JUN:-1.40217226028;PPARG:-1.40263346855;CRX:-1.41804056999;POU2F1..3:-1.49756194842;POU5F1:-1.58765249571;NANOG:-1.62062662487;NKX3-1:-1.64119407009;SOX2:-1.65474829825;SPZ1:-1.71055703162;TBX4,5:-1.71646456832;PAX8:-1.72653914308;RFX2..5_RFXANK_RFXAP:-1.73502678858;NKX6-1,2:-1.78805264503;ATF4:-1.79448855633;EP300:-1.94047475508;HES1:-2.09330698261;HBP1_HMGB_SSRP1_UBTF:-3.19152501405 | |top_motifs=FOXA2:3.44433004397;FOX{F1,F2,J1}:3.36728229519;NKX2-2,8:3.13623271465;NFIL3:2.62380505138;HNF1A:2.5679969769;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.35294057572;FOX{D1,D2}:2.21182965514;HNF4A_NR2F1,2:2.03554356432;CEBPA,B_DDIT3:1.97885628367;ONECUT1,2:1.73633611002;FOXM1:1.65181952235;STAT2,4,6:1.59090153617;NR6A1:1.56227373782;HLF:1.55743321793;RBPJ:1.43629269731;FOXD3:1.42913904954;ARID5B:1.37997482417;CUX2:1.12870993177;EVI1:1.10993079108;NR3C1:1.02605296162;IRF1,2:0.994900535787;GCM1,2:0.929229475714;NR1H4:0.919734872112;CDX1,2,4:0.905155409953;PITX1..3:0.814729596209;GZF1:0.808103085945;PAX1,9:0.80238378852;NFIX:0.771295203904;HMGA1,2:0.747888766246;EBF1:0.716693902983;FOXP1:0.675607252396;ALX4:0.662297669397;TP53:0.652640413983;PAX4:0.640991853815;POU3F1..4:0.638374846781;NKX3-2:0.616580377888;DBP:0.572305370608;HAND1,2:0.505627189845;NR5A1,2:0.491435690452;TLX1..3_NFIC{dimer}:0.351398621068;IRF7:0.333962784697;RORA:0.305747858507;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.296519032902;GATA6:0.289515394709;NANOG{mouse}:0.275950944446;RXRA_VDR{dimer}:0.275578544041;MYBL2:0.267506222101;SPIB:0.26729672961;ELF1,2,4:0.23850136591;FOXQ1:0.224792986952;SPI1:0.200591004871;TBP:0.173035971702;HOX{A4,D4}:0.172363931788;BPTF:0.165666744245;PBX1:0.152837531935;RXR{A,B,G}:0.127596062903;GATA4:0.126629968305;NFY{A,B,C}:0.125117976217;IKZF1:0.0580932642141;LEF1_TCF7_TCF7L1,2:0.0467763546735;NFE2:0.0316653200607;SOX5:0.0219467140182;ESRRA:0.00527991554052;ZNF423:-0.0058234084253;MYOD1:-0.0209564734825;SRF:-0.0263564558966;ETS1,2:-0.031476501119;MTF1:-0.0344032963419;SNAI1..3:-0.0386353506033;E2F1..5:-0.0480485056632;DMAP1_NCOR{1,2}_SMARC:-0.062743755932;TLX2:-0.0643003418117;UFEwm:-0.0643318878339;MEF2{A,B,C,D}:-0.0935610355736;STAT5{A,B}:-0.149025278169;HIF1A:-0.151723659365;ADNP_IRX_SIX_ZHX:-0.153631933877;bHLH_family:-0.16100263236;TAL1_TCF{3,4,12}:-0.161961297489;STAT1,3:-0.194293117757;ZBTB16:-0.19523094079;TEAD1:-0.243655539369;GFI1:-0.248733188448;SP1:-0.257870886208;AR:-0.259809116005;POU6F1:-0.259843024272;SMAD1..7,9:-0.26689627962;TFAP4:-0.277223384007;SREBF1,2:-0.287595438265;AIRE:-0.28827598681;YY1:-0.299645923322;GFI1B:-0.30760844155;FOXN1:-0.336601128096;FOSL2:-0.344121706518;IKZF2:-0.354984174888;RUNX1..3:-0.410332589561;ZEB1:-0.417574876278;TGIF1:-0.419775560425;FOXP3:-0.434265286277;T:-0.440732696639;HOXA9_MEIS1:-0.453627964477;MYFfamily:-0.458940021739;NFKB1_REL_RELA:-0.462431524068;TFCP2:-0.479727560324;XCPE1{core}:-0.479797948133;NHLH1,2:-0.481708004946;ZNF238:-0.504041860745;EN1,2:-0.51090478948;TEF:-0.531239959451;ELK1,4_GABP{A,B1}:-0.546629110734;ZBTB6:-0.569247343747;HSF1,2:-0.594428479674;MAZ:-0.598314532565;PATZ1:-0.609679828984;PAX5:-0.634202601849;MYB:-0.641010018774;ATF6:-0.652814741432;GTF2I:-0.665931743222;REST:-0.671663555163;PDX1:-0.673800011101;POU1F1:-0.694081091981;HOX{A5,B5}:-0.694374306774;ESR1:-0.701168441823;FOX{I1,J2}:-0.70428479588;LMO2:-0.70655114139;CREB1:-0.713298152237;HMX1:-0.714712402809;PAX2:-0.731429307364;BACH2:-0.747751652053;FOXL1:-0.748005212059;ZFP161:-0.756364925431;FOXO1,3,4:-0.781206819467;TOPORS:-0.785657451415;OCT4_SOX2{dimer}:-0.790096322591;NRF1:-0.790549124422;ZIC1..3:-0.791295123054;LHX3,4:-0.793328930768;HIC1:-0.794251925159;KLF4:-0.815973477451;PRDM1:-0.861121259559;ATF5_CREB3:-0.86467258534;SOX{8,9,10}:-0.866926798086;EGR1..3:-0.885824024299;MZF1:-0.890353122023;MTE{core}:-0.909693687903;CDC5L:-0.922074721348;NFE2L2:-0.92328617768;VSX1,2:-0.928983207709;PRRX1,2:-0.930322228307;MED-1{core}:-0.945829305082;FOS_FOS{B,L1}_JUN{B,D}:-0.955394309601;TFAP2{A,C}:-0.957651228839;GTF2A1,2:-0.970823614948;RREB1:-0.979881516305;ALX1:-1.00611317693;TFAP2B:-1.03809370207;NKX2-1,4:-1.04214466365;GLI1..3:-1.04375303157;AHR_ARNT_ARNT2:-1.088416277;PAX6:-1.12049339523;MAFB:-1.12526651673;ZNF143:-1.13843030612;BREu{core}:-1.15779129246;ZNF384:-1.16430098612;NFATC1..3:-1.17508167765;NKX2-3_NKX2-5:-1.19860527268;RFX1:-1.20299960361;NFE2L1:-1.21997286473;ATF2:-1.27010521831;ZNF148:-1.32056845187;SOX17:-1.33181869791;TFDP1:-1.37961144809;JUN:-1.40217226028;PPARG:-1.40263346855;CRX:-1.41804056999;POU2F1..3:-1.49756194842;POU5F1:-1.58765249571;NANOG:-1.62062662487;NKX3-1:-1.64119407009;SOX2:-1.65474829825;SPZ1:-1.71055703162;TBX4,5:-1.71646456832;PAX8:-1.72653914308;RFX2..5_RFXANK_RFXAP:-1.73502678858;NKX6-1,2:-1.78805264503;ATF4:-1.79448855633;EP300:-1.94047475508;HES1:-2.09330698261;HBP1_HMGB_SSRP1_UBTF:-3.19152501405 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:751-24B9;search_select_hide=table117:751-24B9 | |||
}} | }} |
Latest revision as of 19:20, 4 June 2020
Name: | liver, neonate N10 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11115 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11115
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0.0235 |
1001 | 0.148 |
1002 | -0.0388 |
1003 | -0.00256 |
1004 | 0 |
1005 | 0.0791 |
1006 | 0.021 |
1007 | -0.0614 |
1008 | 0 |
1009 | 0.0272 |
101 | -0.0232 |
1010 | 0 |
1011 | -0.168 |
1012 | 0 |
1013 | 0.39 |
1014 | 0.00534 |
1015 | -0.166 |
1016 | 0.0251 |
1017 | 0 |
1018 | 0 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0 |
1022 | 0.193 |
1023 | 0 |
1024 | 0 |
1025 | 0.617 |
1026 | 0 |
1027 | 0 |
1028 | 0 |
1029 | 0.0278 |
103 | 0 |
1030 | 0.118 |
1031 | -0.0163 |
1032 | -0.177 |
1033 | 0 |
1034 | 0.647 |
1035 | 0 |
1036 | 0.0301 |
1037 | 0 |
1038 | -0.0566 |
1039 | 0.487 |
104 | 0 |
1040 | -0.152 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11115
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11115
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.128 |
10 | 10 | 0.143 |
100 | 100 | 0.66 |
101 | 101 | 0.986 |
102 | 102 | 0.0928 |
103 | 103 | 0.0156 |
104 | 104 | 0.555 |
105 | 105 | 0.827 |
106 | 106 | 0.0403 |
107 | 107 | 0.0387 |
108 | 108 | 0.383 |
109 | 109 | 0.0684 |
11 | 11 | 0.113 |
110 | 110 | 0.0424 |
111 | 111 | 0.0782 |
112 | 112 | 0.00567 |
113 | 113 | 0.899 |
114 | 114 | 0.0371 |
115 | 115 | 0.861 |
116 | 116 | 0.905 |
117 | 117 | 0.0793 |
118 | 118 | 0.188 |
119 | 119 | 0.0979 |
12 | 12 | 0.593 |
120 | 120 | 0.562 |
121 | 121 | 0.767 |
122 | 122 | 0.606 |
123 | 123 | 0.289 |
124 | 124 | 0.409 |
125 | 125 | 0.277 |
126 | 126 | 0.336 |
127 | 127 | 0.55 |
128 | 128 | 0.0286 |
129 | 129 | 0.638 |
13 | 13 | 8.1832e-5 |
130 | 130 | 0.617 |
131 | 131 | 0.157 |
132 | 132 | 0.494 |
133 | 133 | 0.503 |
134 | 134 | 0.816 |
135 | 135 | 0.476 |
136 | 136 | 0.387 |
137 | 137 | 0.976 |
138 | 138 | 0.217 |
139 | 139 | 0.852 |
14 | 14 | 0.409 |
140 | 140 | 0.0187 |
141 | 141 | 0.383 |
142 | 142 | 0.363 |
143 | 143 | 0.843 |
144 | 144 | 0.749 |
145 | 145 | 0.0481 |
146 | 146 | 0.383 |
147 | 147 | 0.449 |
148 | 148 | 0.592 |
149 | 149 | 0.712 |
15 | 15 | 0.177 |
150 | 150 | 0.227 |
151 | 151 | 0.551 |
152 | 152 | 0.142 |
153 | 153 | 0.115 |
154 | 154 | 0.479 |
155 | 155 | 0.988 |
156 | 156 | 0.271 |
157 | 157 | 0.298 |
158 | 158 | 0.343 |
159 | 159 | 0.701 |
160 | 160 | 0.147 |
161 | 161 | 0.868 |
162 | 162 | 0.523 |
163 | 163 | 0.828 |
164 | 164 | 0.17 |
165 | 165 | 0.34 |
166 | 166 | 0.235 |
167 | 167 | 0.226 |
168 | 168 | 0.571 |
169 | 169 | 8.91765e-4 |
17 | 17 | 0.0707 |
18 | 18 | 0.899 |
19 | 19 | 0.014 |
2 | 2 | 0.751 |
20 | 20 | 0.493 |
21 | 21 | 0.477 |
22 | 22 | 0.131 |
23 | 23 | 0.327 |
24 | 24 | 0.254 |
25 | 25 | 0.745 |
26 | 26 | 2.42e-4 |
27 | 27 | 0.725 |
28 | 28 | 0.452 |
29 | 29 | 0.391 |
3 | 3 | 0.0436 |
30 | 30 | 0.911 |
31 | 31 | 0.4 |
32 | 32 | 0.19 |
33 | 33 | 0.298 |
34 | 34 | 0.864 |
35 | 35 | 0.887 |
36 | 36 | 0.0755 |
37 | 37 | 0.0618 |
38 | 38 | 0.269 |
39 | 39 | 0.287 |
4 | 4 | 0.803 |
40 | 40 | 0.197 |
41 | 41 | 0.505 |
42 | 42 | 0.276 |
43 | 43 | 0.0577 |
44 | 44 | 0.249 |
45 | 45 | 0.659 |
46 | 46 | 0.092 |
47 | 47 | 0.384 |
48 | 48 | 0.21 |
49 | 49 | 0.0589 |
5 | 5 | 0.124 |
50 | 50 | 0.531 |
51 | 51 | 0.319 |
52 | 52 | 0.291 |
53 | 53 | 0.726 |
54 | 54 | 0.336 |
55 | 55 | 0.583 |
56 | 56 | 0.435 |
57 | 57 | 0.742 |
58 | 58 | 0.315 |
59 | 59 | 0.214 |
6 | 6 | 0.979 |
60 | 60 | 0.134 |
61 | 61 | 0.193 |
62 | 62 | 0.172 |
63 | 63 | 0.125 |
64 | 64 | 0.593 |
65 | 65 | 0.233 |
66 | 66 | 0.802 |
67 | 67 | 0.87 |
68 | 68 | 0.208 |
69 | 69 | 0.684 |
7 | 7 | 0.142 |
70 | 70 | 0.164 |
71 | 71 | 0.0408 |
72 | 72 | 0.753 |
73 | 73 | 0.148 |
74 | 74 | 0.762 |
75 | 75 | 0.055 |
76 | 76 | 0.995 |
77 | 77 | 0.46 |
78 | 78 | 0.0203 |
79 | 79 | 0.797 |
8 | 8 | 0.0119 |
80 | 80 | 0.637 |
81 | 81 | 0.607 |
82 | 82 | 0.0553 |
83 | 83 | 0.974 |
84 | 84 | 0.961 |
85 | 85 | 0.0589 |
86 | 86 | 0.144 |
87 | 87 | 0.569 |
88 | 88 | 0.663 |
89 | 89 | 0.0304 |
9 | 9 | 0.5 |
90 | 90 | 0.15 |
91 | 91 | 0.222 |
92 | 92 | 0.194 |
93 | 93 | 0.28 |
94 | 94 | 0.934 |
95 | 95 | 0.396 |
96 | 96 | 0.163 |
97 | 97 | 0.812 |
98 | 98 | 0.361 |
99 | 99 | 0.0558 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11115
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000305 (mouse neonate N10 sample)
0011416 (mouse liver- neonate N10 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0001041 (foregut)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0003104 (mesenchyme)
UBERON:0004161 (septum transversum)
UBERON:0009497 (epithelium of foregut-midgut junction)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)