FFCP PHASE1:Mm9::chr5:135462039..135462042,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:135462039..135462042,+
|short_description=p5@Cldn3
|description=CAGE_peak_5_at_Cldn3_5end
|association_with_transcript=-41bp_to_ENSMUST00000094245,NM_00990...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12739 | |EntrezGene=12739 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0G9,Q545A5 | |UniProt=Q9Z0G9,Q545A5 | ||
|association_with_transcript=-41bp_to_ENSMUST00000094245,NM_009902,uc008zxe.2_5end | |||
|cluster_id=chr5:135462039..135462042,+ | |||
|description=CAGE_peak_5_at_Cldn3_5end | |||
|id=chr5:135462039..135462042,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.34e-15!25;CL:0000223!1.49e-11!20;CL:0002563!1.77e-10!9;CL:0002251!1.77e-10!9;CL:0002076!2.18e-09!15;CL:0000075!1.19e-08!7;CL:0000239!5.11e-08!6;CL:0000677!5.11e-08!6;CL:0000212!5.11e-08!6;CL:0000584!5.11e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.52e-27,25;CL:0000223,9.84e-23,20;CL:0002076,1.34e-19,15;CL:0002563,3.43e-19,9;CL:0002251,3.43e-19,9;CL:0000239,1.62e-17,6;CL:0000677,1.62e-17,6;CL:0000584,1.62e-17,6;CL:0000075,6.69e-15,7;CL:0000682,2.43e-09,3;CL:0000068,2.18e-07,3;CL:0002202,2.18e-07,3;CL:0000069,2.18e-07,3;CL:0002632,2.18e-07,3;CL:0002368,2.18e-07,3;CL:0000307,2.18e-07,3;CL:0000377,2.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.34e-19!130;UBERON:0000925!2.34e-19!130;UBERON:0006595!2.34e-19!130;UBERON:0001007!2.40e-18!128;UBERON:0001555!2.40e-18!128;UBERON:0007026!2.40e-18!128;UBERON:0000160!2.79e-18!43;UBERON:0004921!8.18e-17!126;UBERON:0004185!8.18e-17!126;UBERON:0000344!2.80e-16!15;UBERON:0005409!2.18e-14!59;UBERON:0001242!2.92e-14!13;UBERON:0000060!2.92e-14!13;UBERON:0001262!2.92e-14!13;UBERON:0004786!2.92e-14!13;UBERON:0004923!5.21e-13!24;UBERON:0000485!2.39e-11!11;UBERON:0003350!1.77e-10!9;UBERON:0004808!1.77e-10!9;UBERON:0001277!1.77e-10!9;UBERON:0000466!3.10e-08!79;UBERON:0005178!1.70e-07!17;UBERON:0005181!1.70e-07!17;UBERON:0002224!1.70e-07!17;UBERON:0000915!1.70e-07!17;UBERON:0008947!1.70e-07!17;UBERON:0003258!1.70e-07!17;UBERON:0005911!8.43e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.71e-33,15;UBERON:0001242,1.63e-28,13;UBERON:0001262,1.63e-28,13;UBERON:0004786,1.63e-28,13;UBERON:0004923,9.64e-23,24;UBERON:0003350,3.43e-19,9;UBERON:0004808,3.43e-19,9;UBERON:0001277,3.43e-19,9;UBERON:0000160,7.31e-19,31;UBERON:0000485,1.93e-15,11;UBERON:0005409,8.04e-13,47;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0004119,2.32e-10,118;UBERON:0000925,2.32e-10,118;UBERON:0006595,2.32e-10,118;UBERON:0004921,8.78e-09,114;UBERON:0000331,8.81e-09,3;UBERON:0002116,8.81e-09,3;UBERON:0001204,8.81e-09,3;UBERON:0001168,8.81e-09,3;UBERON:0003126,2.18e-07,3;UBERON:0001005,2.18e-07,3;UBERON:0007196,2.18e-07,3;UBERON:0001558,2.18e-07,3 | |||
|phase1_expression=0.160148847104794,6.97950815278722,5.91499011206397,9.98131897312539,11.520601788766,8.05820505177071,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.63978026100879,2.98232065387321,4.59385571292016,5.1691439539089,7.32602191132023,3.42042155021473,2.77233142735924,4.43461021310609,0,0,0,1.44425809875637,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,0.679971333707751,0,1.29955283489534,1.79210754838934,0.140444420131752,0,0,0,0.845060518660083,0,0,0,1.08245520505607,1.26679932737549,1.01104889002957,0.5709193985953,0,0,0,0,0,0,0,0,2.71914464507811,0.144599356919912,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,3.28539585963777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.994782360205754,0.779856348476481,0.898819408654221,1.08069024937347,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,1.24815069245824,0.505157755894224,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0.837531287209079,0.714130922658041,1.75620283072019,0.315270288212382,0.8858587585951,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.488660878060728,3.79431282836832,0,0.485561272309963,0.906970670894253,0,0.295301892880773,1.84461088766356,0,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,2.07383957266869,0,0,0,0,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,1.83151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,6.97950815278722,5.91499011206397,9.98131897312539,11.520601788766,8.05820505177071,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.63978026100879,2.98232065387321,4.59385571292016,5.1691439539089,7.32602191132023,3.42042155021473,2.77233142735924,4.43461021310609,0,0,0,1.44425809875637,0.997407872150954,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,0.679971333707751,0,1.29955283489534,1.79210754838934,0.140444420131752,0,0,0,0.845060518660083,0,0,0,1.08245520505607,1.26679932737549,1.01104889002957,0.5709193985953,0,0,0,0,0,0,0,0,2.71914464507811,0.144599356919912,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,3.28539585963777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.994782360205754,0.779856348476481,0.898819408654221,1.08069024937347,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,1.24815069245824,0.505157755894224,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0.837531287209079,0.714130922658041,1.75620283072019,0.315270288212382,0.8858587585951,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.488660878060728,3.79431282836832,0,0.485561272309963,0.906970670894253,0,0.295301892880773,1.84461088766356,0,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,2.07383957266869,0,0,0,0,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,1.83151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p5@Cldn3 | |||
}} | }} |
Latest revision as of 23:59, 1 October 2015
Short description: | p5@Cldn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cldn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -41bp_to_ENSMUST00000094245, NM_009902, uc008zxe.2_5end |
EntrezGene: | Cldn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.52e-27 | 25 |
endodermal cell | 9.84e-23 | 20 |
endo-epithelial cell | 1.34e-19 | 15 |
intestinal epithelial cell | 3.43e-19 | 9 |
epithelial cell of alimentary canal | 3.43e-19 | 9 |
brush border epithelial cell | 1.62e-17 | 6 |
gut absorptive cell | 1.62e-17 | 6 |
enterocyte | 1.62e-17 | 6 |
columnar/cuboidal epithelial cell | 6.69e-15 | 7 |
M cell of gut | 2.43e-09 | 3 |
duct epithelial cell | 2.18e-07 | 3 |
epithelial cell of tracheobronchial tree | 2.18e-07 | 3 |
branched duct epithelial cell | 2.18e-07 | 3 |
epithelial cell of lower respiratory tract | 2.18e-07 | 3 |
respiratory epithelial cell | 2.18e-07 | 3 |
tracheal epithelial cell | 2.18e-07 | 3 |
tracheoblast | 2.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.71e-33 | 15 |
intestinal mucosa | 1.63e-28 | 13 |
wall of intestine | 1.63e-28 | 13 |
gastrointestinal system mucosa | 1.63e-28 | 13 |
organ component layer | 9.64e-23 | 24 |
epithelium of mucosa | 3.43e-19 | 9 |
gastrointestinal system epithelium | 3.43e-19 | 9 |
intestinal epithelium | 3.43e-19 | 9 |
intestine | 7.31e-19 | 31 |
simple columnar epithelium | 1.93e-15 | 11 |
gastrointestinal system | 8.04e-13 | 47 |
digestive system | 1.22e-10 | 116 |
digestive tract | 1.22e-10 | 116 |
primitive gut | 1.22e-10 | 116 |
endoderm-derived structure | 2.32e-10 | 118 |
endoderm | 2.32e-10 | 118 |
presumptive endoderm | 2.32e-10 | 118 |
subdivision of digestive tract | 8.78e-09 | 114 |
ileal mucosa | 8.81e-09 | 3 |
ileum | 8.81e-09 | 3 |
mucosa of small intestine | 8.81e-09 | 3 |
wall of small intestine | 8.81e-09 | 3 |
trachea | 2.18e-07 | 3 |
respiratory airway | 2.18e-07 | 3 |
tracheobronchial tree | 2.18e-07 | 3 |
lower respiratory tract | 2.18e-07 | 3 |