FFCP PHASE1:Mm9::chr8:39724608..39724619,-: Difference between revisions
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{{FFCP|EntrezGene=244431|HGNC=|MCL_coexpression_id=1|UniProt=Q8BX51,D6RFA5|association_with_transcript=-46bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end|description=CAGE_peak_3_at_Sgcz_5end|id=chr8:39724608..39724619,-|ontology_enrichment_celltype=CL:0000117!1.93e-12!23;CL:0000337!1.93e-12!23;CL:0000540!1.70e-08!33;CL:0000047!1.70e-08!33;CL:0000031!1.70e-08!33;CL:0000404!1.70e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-17,23;CL:0000337,1.26e-17,23;CL:0000540,1.55e-11,33;CL:0000047,1.55e-11,33;CL:0000031,1.55e-11,33;CL:0000404,1.55e-11,33;CL:0002614,1.96e-10,3;CL:0002612,2.61e-10,3;CL:0000393,2.18e-09,39;CL:0000211,2.18e-09,39;CL:0002319,2.73e-08,43;CL:0000221,4.77e-08,44;CL:0000133,4.77e-08,44;CL:0002611,1.44e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.42e-23!52;UBERON:0005068!3.42e-23!52;UBERON:0006241!3.42e-23!52;UBERON:0007135!3.42e-23!52;UBERON:0001017!5.75e-20!73;UBERON:0005743!5.75e-20!73;UBERON:0000955!1.96e-19!50;UBERON:0006238!1.96e-19!50;UBERON:0002346!2.93e-19!71;UBERON:0003075!2.93e-19!71;UBERON:0007284!2.93e-19!71;UBERON:0000073!5.57e-19!75;UBERON:0001016!5.57e-19!75;UBERON:0000033!5.74e-19!63;UBERON:0002616!1.21e-18!49;UBERON:0002020!1.57e-16!34;UBERON:0003080!1.42e-15!40;UBERON:0003056!2.91e-15!49;UBERON:0004121!5.04e-15!102;UBERON:0000924!5.04e-15!102;UBERON:0006601!5.04e-15!102;UBERON:0002780!1.15e-14!39;UBERON:0001890!1.15e-14!39;UBERON:0006240!1.15e-14!39;UBERON:0002791!7.13e-12!29;UBERON:0003528!7.13e-12!29;UBERON:0001893!7.13e-12!29;UBERON:0007811!8.20e-12!86;UBERON:0000153!1.19e-11!94;UBERON:0003076!1.78e-08!12;UBERON:0003057!1.78e-08!12;UBERON:0002420!2.57e-08!8;UBERON:0007245!2.57e-08!8;UBERON:0010009!2.57e-08!8;UBERON:0010011!2.57e-08!8;UBERON:0000454!2.57e-08!8;UBERON:0002021!3.52e-08!10;UBERON:0000411!3.52e-08!10;UBERON:0001950!3.52e-08!10;UBERON:0002240!1.71e-07!6;UBERON:0005174!1.71e-07!6;UBERON:0001137!1.71e-07!6;UBERON:0002298!1.75e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-39,54;UBERON:0001049,7.59e-38,52;UBERON:0005068,7.59e-38,52;UBERON:0006241,7.59e-38,52;UBERON:0007135,7.59e-38,52;UBERON:0001017,3.55e-30,73;UBERON:0002346,8.14e-30,64;UBERON:0003075,8.14e-30,64;UBERON:0007284,8.14e-30,64;UBERON:0001016,3.10e-29,75;UBERON:0002020,6.83e-26,34;UBERON:0010371,1.61e-25,73;UBERON:0002616,1.45e-24,46;UBERON:0000955,5.97e-24,47;UBERON:0006238,5.97e-24,47;UBERON:0004121,5.37e-22,95;UBERON:0000924,5.37e-22,95;UBERON:0006601,5.37e-22,95;UBERON:0003080,8.99e-21,40;UBERON:0003076,2.54e-19,12;UBERON:0003057,2.54e-19,12;UBERON:0010314,3.37e-19,92;UBERON:0002780,8.82e-19,39;UBERON:0001890,8.82e-19,39;UBERON:0006240,8.82e-19,39;UBERON:0002240,1.28e-18,6;UBERON:0005174,1.28e-18,6;UBERON:0001137,1.28e-18,6;UBERON:0003056,2.92e-16,49;UBERON:0001948,3.05e-16,5;UBERON:0002315,3.05e-16,5;UBERON:0003528,3.82e-15,29;UBERON:0002791,3.82e-15,29;UBERON:0001893,3.82e-15,29;UBERON:0000025,1.69e-14,114;UBERON:0002021,1.07e-13,10;UBERON:0000411,1.07e-13,10;UBERON:0001950,1.07e-13,10;UBERON:0002950,2.37e-13,4;UBERON:0001891,2.37e-13,4;UBERON:0009616,2.37e-13,4;UBERON:0010286,2.37e-13,4;UBERON:0004111,3.32e-13,122;UBERON:0002038,1.96e-10,3;UBERON:0009663,1.96e-10,3;UBERON:0009661,1.96e-10,3;UBERON:0000125,1.96e-10,3;UBERON:0002308,1.96e-10,3;UBERON:0002257,2.61e-10,3;UBERON:0002420,1.08e-09,8;UBERON:0007245,1.08e-09,8;UBERON:0010009,1.08e-09,8;UBERON:0010011,1.08e-09,8;UBERON:0000454,1.08e-09,8;UBERON:0011216,4.98e-08,194;UBERON:0000956,6.70e-08,21;UBERON:0001869,6.70e-08,21;UBERON:0000203,6.70e-08,21;UBERON:0002619,1.10e-07,17;UBERON:0000483,1.13e-07,174;UBERON:0002256,1.44e-07,2;UBERON:0000119,1.59e-07,176;UBERON:0001896,7.24e-07,2;UBERON:0002298,7.24e-07,2;UBERON:0005290,7.24e-07,2;UBERON:0010096,7.24e-07,2|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,2.85650984403804,3.97563373712904,0.122490799214954,0.191690942036473,0,0,2.55374676170375,2.30409799884365,0.923204014111357,1.18933936683133,3.12548022334056,2.51264699101243,5.06486349028512,2.90316670775939,1.76777151284201,3.98640706237488,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.445326417194474,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,2.99581278809645,0.457500602818626,0.376963056338593,2.43354048269187,2.30143911597297,1.87009240103604,2.75810147215188,0,0,0,0,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,1.24138163549592,0.356737635204141,1.48094118541909,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.71853182343688,3.42541259885321,3.0215755895588,0,1.35096360967266,0.906284817968409,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.561849044819294,0.128050304809739,0.574354689556133,0,0.463537303779422,0.38581844092741,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.376437521661322,0.592302255241736,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.29551344712669,0.409231043169689,0.619747364743864,0,0,0,0.429742108096597,0.57386499620653,0,0.463735671240843|short_description=p3@Sgcz}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244431 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BX51,D6RFA5 | |||
|association_with_transcript=-46bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end | |||
|cluster_id=chr8:39724608..39724619,- | |||
|description=CAGE_peak_3_at_Sgcz_5end | |||
|id=chr8:39724608..39724619,- | |||
|ontology_enrichment_celltype=CL:0000117!1.93e-12!23;CL:0000337!1.93e-12!23;CL:0000540!1.70e-08!33;CL:0000047!1.70e-08!33;CL:0000031!1.70e-08!33;CL:0000404!1.70e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-17,23;CL:0000337,1.26e-17,23;CL:0000540,1.55e-11,33;CL:0000047,1.55e-11,33;CL:0000031,1.55e-11,33;CL:0000404,1.55e-11,33;CL:0002614,1.96e-10,3;CL:0002612,2.61e-10,3;CL:0000393,2.18e-09,39;CL:0000211,2.18e-09,39;CL:0002319,2.73e-08,43;CL:0000221,4.77e-08,44;CL:0000133,4.77e-08,44;CL:0002611,1.44e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.42e-23!52;UBERON:0005068!3.42e-23!52;UBERON:0006241!3.42e-23!52;UBERON:0007135!3.42e-23!52;UBERON:0001017!5.75e-20!73;UBERON:0005743!5.75e-20!73;UBERON:0000955!1.96e-19!50;UBERON:0006238!1.96e-19!50;UBERON:0002346!2.93e-19!71;UBERON:0003075!2.93e-19!71;UBERON:0007284!2.93e-19!71;UBERON:0000073!5.57e-19!75;UBERON:0001016!5.57e-19!75;UBERON:0000033!5.74e-19!63;UBERON:0002616!1.21e-18!49;UBERON:0002020!1.57e-16!34;UBERON:0003080!1.42e-15!40;UBERON:0003056!2.91e-15!49;UBERON:0004121!5.04e-15!102;UBERON:0000924!5.04e-15!102;UBERON:0006601!5.04e-15!102;UBERON:0002780!1.15e-14!39;UBERON:0001890!1.15e-14!39;UBERON:0006240!1.15e-14!39;UBERON:0002791!7.13e-12!29;UBERON:0003528!7.13e-12!29;UBERON:0001893!7.13e-12!29;UBERON:0007811!8.20e-12!86;UBERON:0000153!1.19e-11!94;UBERON:0003076!1.78e-08!12;UBERON:0003057!1.78e-08!12;UBERON:0002420!2.57e-08!8;UBERON:0007245!2.57e-08!8;UBERON:0010009!2.57e-08!8;UBERON:0010011!2.57e-08!8;UBERON:0000454!2.57e-08!8;UBERON:0002021!3.52e-08!10;UBERON:0000411!3.52e-08!10;UBERON:0001950!3.52e-08!10;UBERON:0002240!1.71e-07!6;UBERON:0005174!1.71e-07!6;UBERON:0001137!1.71e-07!6;UBERON:0002298!1.75e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-39,54;UBERON:0001049,7.59e-38,52;UBERON:0005068,7.59e-38,52;UBERON:0006241,7.59e-38,52;UBERON:0007135,7.59e-38,52;UBERON:0001017,3.55e-30,73;UBERON:0002346,8.14e-30,64;UBERON:0003075,8.14e-30,64;UBERON:0007284,8.14e-30,64;UBERON:0001016,3.10e-29,75;UBERON:0002020,6.83e-26,34;UBERON:0010371,1.61e-25,73;UBERON:0002616,1.45e-24,46;UBERON:0000955,5.97e-24,47;UBERON:0006238,5.97e-24,47;UBERON:0004121,5.37e-22,95;UBERON:0000924,5.37e-22,95;UBERON:0006601,5.37e-22,95;UBERON:0003080,8.99e-21,40;UBERON:0003076,2.54e-19,12;UBERON:0003057,2.54e-19,12;UBERON:0010314,3.37e-19,92;UBERON:0002780,8.82e-19,39;UBERON:0001890,8.82e-19,39;UBERON:0006240,8.82e-19,39;UBERON:0002240,1.28e-18,6;UBERON:0005174,1.28e-18,6;UBERON:0001137,1.28e-18,6;UBERON:0003056,2.92e-16,49;UBERON:0001948,3.05e-16,5;UBERON:0002315,3.05e-16,5;UBERON:0003528,3.82e-15,29;UBERON:0002791,3.82e-15,29;UBERON:0001893,3.82e-15,29;UBERON:0000025,1.69e-14,114;UBERON:0002021,1.07e-13,10;UBERON:0000411,1.07e-13,10;UBERON:0001950,1.07e-13,10;UBERON:0002950,2.37e-13,4;UBERON:0001891,2.37e-13,4;UBERON:0009616,2.37e-13,4;UBERON:0010286,2.37e-13,4;UBERON:0004111,3.32e-13,122;UBERON:0002038,1.96e-10,3;UBERON:0009663,1.96e-10,3;UBERON:0009661,1.96e-10,3;UBERON:0000125,1.96e-10,3;UBERON:0002308,1.96e-10,3;UBERON:0002257,2.61e-10,3;UBERON:0002420,1.08e-09,8;UBERON:0007245,1.08e-09,8;UBERON:0010009,1.08e-09,8;UBERON:0010011,1.08e-09,8;UBERON:0000454,1.08e-09,8;UBERON:0011216,4.98e-08,194;UBERON:0000956,6.70e-08,21;UBERON:0001869,6.70e-08,21;UBERON:0000203,6.70e-08,21;UBERON:0002619,1.10e-07,17;UBERON:0000483,1.13e-07,174;UBERON:0002256,1.44e-07,2;UBERON:0000119,1.59e-07,176;UBERON:0001896,7.24e-07,2;UBERON:0002298,7.24e-07,2;UBERON:0005290,7.24e-07,2;UBERON:0010096,7.24e-07,2 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,2.85650984403804,3.97563373712904,0.122490799214954,0.191690942036473,0,0,2.55374676170375,2.30409799884365,0.923204014111357,1.18933936683133,3.12548022334056,2.51264699101243,5.06486349028512,2.90316670775939,1.76777151284201,3.98640706237488,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.445326417194474,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,2.99581278809645,0.457500602818626,0.376963056338593,2.43354048269187,2.30143911597297,1.87009240103604,2.75810147215188,0,0,0,0,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,1.24138163549592,0.356737635204141,1.48094118541909,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.71853182343688,3.42541259885321,3.0215755895588,0,1.35096360967266,0.906284817968409,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.561849044819294,0.128050304809739,0.574354689556133,0,0.463537303779422,0.38581844092741,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.376437521661322,0.592302255241736,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.29551344712669,0.409231043169689,0.619747364743864,0,0,0,0.429742108096597,0.57386499620653,0,0.463735671240843 | |||
|short_description=p3@Sgcz | |||
}} |
Latest revision as of 23:24, 1 October 2015
Short description: | p3@Sgcz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sgcz_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -46bp_to_ENSMUST00000118896, ENSMUST00000135764, NM_145841, uc009lme.2_5end |
EntrezGene: | Sgcz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-17 | 23 |
neuron | 1.55e-11 | 33 |
neuronal stem cell | 1.55e-11 | 33 |
neuroblast | 1.55e-11 | 33 |
electrically signaling cell | 1.55e-11 | 33 |
neuron of the substantia nigra | 1.96e-10 | 3 |
neuron of the ventral spinal cord | 2.61e-10 | 3 |
electrically responsive cell | 2.18e-09 | 39 |
electrically active cell | 2.18e-09 | 39 |
neural cell | 2.73e-08 | 43 |
ectodermal cell | 4.77e-08 | 44 |
neurectodermal cell | 4.77e-08 | 44 |
neuron of the dorsal spinal cord | 1.44e-07 | 2 |