FFCP PHASE1:Mm9::chr2:112124718..112124767,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107723 | |EntrezGene=107723 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q924N4 | |UniProt=Q924N4 | ||
|association_with_transcript=0bp_to_ENSMUST00000053666_5end | |association_with_transcript=0bp_to_ENSMUST00000053666_5end | ||
|cluster_id=chr2:112124718..112124767,+ | |||
|description=CAGE_peak_4_at_Slc12a6_5end | |description=CAGE_peak_4_at_Slc12a6_5end | ||
|id=chr2:112124718..112124767,+ | |id=chr2:112124718..112124767,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.23e-19!59;UBERON:0000160!4.47e-15!43;UBERON:0004119!2.22e-10!130;UBERON:0000925!2.22e-10!130;UBERON:0006595!2.22e-10!130;UBERON:0001007!3.14e-10!128;UBERON:0001555!3.14e-10!128;UBERON:0007026!3.14e-10!128;UBERON:0000344!8.29e-10!15;UBERON:0004923!1.80e-09!24;UBERON:0004921!1.93e-09!126;UBERON:0004185!1.93e-09!126;UBERON:0001242!9.01e-09!13;UBERON:0000060!9.01e-09!13;UBERON:0001262!9.01e-09!13;UBERON:0004786!9.01e-09!13 | |ontology_enrichment_uberon=UBERON:0005409!1.23e-19!59;UBERON:0000160!4.47e-15!43;UBERON:0004119!2.22e-10!130;UBERON:0000925!2.22e-10!130;UBERON:0006595!2.22e-10!130;UBERON:0001007!3.14e-10!128;UBERON:0001555!3.14e-10!128;UBERON:0007026!3.14e-10!128;UBERON:0000344!8.29e-10!15;UBERON:0004923!1.80e-09!24;UBERON:0004921!1.93e-09!126;UBERON:0004185!1.93e-09!126;UBERON:0001242!9.01e-09!13;UBERON:0000060!9.01e-09!13;UBERON:0001262!9.01e-09!13;UBERON:0004786!9.01e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.51e-22,47;UBERON:0000160,2.90e-18,31;UBERON:0004119,2.04e-10,118;UBERON:0000925,2.04e-10,118;UBERON:0006595,2.04e-10,118;UBERON:0001007,2.83e-10,116;UBERON:0001555,2.83e-10,116;UBERON:0007026,2.83e-10,116;UBERON:0000344,5.30e-10,15;UBERON:0004923,1.46e-09,24;UBERON:0004921,1.82e-09,114;UBERON:0001242,6.09e-09,13;UBERON:0001262,6.09e-09,13;UBERON:0004786,6.09e-09,13;UBERON:0000485,8.59e-07,11 | |||
|phase1_expression=3.20297694209588,31.7567620951819,29.1199513209303,93.1589770825037,105.188103288733,16.6200479192771,16.1192722010913,4.26106967357202,0,0.468129052643987,0,0.398860794976682,0,0.34968160967599,10.6595123781012,5.4668322195253,2.79824751251259,0.315462165358238,0.411343300817216,2.12194825899015,7.313722952992,0.0992909512008853,0,18.079143775655,17.2056960800378,20.6723507081407,21.9688618041128,20.2542958724736,38.1947073107312,29.4875251819119,13.5255611499736,12.065582795733,7.99584223859941,0,14.731432607315,9.30914014007557,14.2918549383658,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,3.77690453926732,3.04130793658544,2.56965453026354,0.782391344348039,0,0.219686182734472,1.36100929351998,1.39986421625363,0,0.335565212115473,0.725362142011344,0,3.60163210450326,2.86533439938757,4.12537673821954,0.606949382578793,0.528990979272033,0,2.71075625655306,2.66788438833342,0.899899717281399,0,0.7104801149461,0.898800331555214,0,0.414758449233911,0,0.420649922702764,0,0.441737081903227,0,0.383381884072945,0,2.20231761998777,0.638436690425939,0.46081959976873,0,0.0914876436024097,0.52091337055676,0.279182999001381,2.25105044012672,1.37518422999129,0.294628585473668,0.569486723196412,0.559198337475902,2.42323818666189,2.64500460373749,5.2175607966302,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,6.88177658645584,4.09032774187339,3.11743205523443,2.47337702157238,8.02807492727079,8.98285341900225,5.09610479413291,0,5.84525810730278,5.82727690592727,4.54972000513305,16.3282947998256,0,2.9688427812965,1.38788261412909,1.52232739156071,1.61430848079241,0.753613202763113,1.52865319276416,1.38233250462643,5.43828929015623,1.01219549843938,1.76922110389975,0.647067399789637,1.32504911076236,1.45462575940567,48.4618579167118,0.292780797011547,0.209446706813455,29.8884754594052,0.958520996047362,1.19980546198682,0.889491589511453,0.449371918214468,0.457500602818626,0,1.21677024134594,1.27857728665165,0.62336413367868,0.162241263067758,1.62942982160506,2.23932547098167,4.54900965180614,16.414464759145,1.43132487258974,0.689706313300419,0.720248519221397,1.65775299619287,2.78949646520444,5.50888997224854,6.37171727006156,25.8703370739016,0.431135985865684,2.45837904218165,0.879755620819744,0,0.834141747676794,0.696504333044333,1.64625709126355,1.19420560091096,0,0.772043721344145,0,1.86413195281952,3.28336483973535,2.34080679899319,2.3674473558521,1.77087808572663,2.93107514486019,0.930135779001631,2.68273401399619,1.63471479314037,1.6455984991348,0.820837320395476,1.05389452409612,1.16959989940266,1.09775057645525,1.47627060636409,1.05144974282064,0,59.8057997200674,16.9248362664668,2.13288250535234,3.0190767341857,10.3093969057675,22.386871233191,23.3496946037114,24.3488801424076,23.7264530772256,24.3754452991536,23.1228392096248,15.7175612912509,19.3014446247929,30.5598598942435,29.8270508827078,40.2265371973822,1.13800740571849,2.05647322697512,2.25415471346161,4.68398054044223,6.40043207653165,6.73303870947058,8.03104021478068,24.2080642686548,18.3688511574409,17.8925887686611,0.296452627087149,4.17112764290235,4.32429789249047,4.94696647246678,4.05720242777006,1.92941727801933,1.2731292589071,2.5892652370573,1.62135226775035,1.37280706594041,1.43768206527355,0,1.24815069245824,0.505157755894224,0.358794827043824,0.964887042726734,12.9327233116623,1.13694847062291,3.09633455239849,2.54617628662782,2.11221223459652,2.34508760418542,5.2369600994923,3.12213836572478,6.46304090835383,6.2010113101657,4.78364305972461,8.84861899464985,7.9435091658312,9.40218880779825,1.50791283939272,1.08781136763742,1.96705709207614,2.20749397043786,1.28440471990234,0.586058432961016,0.327869890753351,0.252470927204373,2.2085575359138,1.95219372148319,2.80050417052639,2.62865677747807,4.90157082981267,1.98153571552183,1.21443210502468,1.75353514746787,3.16230222357219,7.06906896127976,4.9679029822894,1.06839362200353,1.79175655288934,1.64970122972535,2.65490276679926,2.91336763385978,2.41858845571801,1.32023555829129,1.47650946440386,1.84461088766356,7.23599220871019,3.27180356529755,3.20847640546249,1.26414703174326,2.10837217149998,2.06271086496374,3.74483566329167,2.52085531643834,1.16422815404479,2.14337035031592,1.77340233642274,0.891844088010353,0.658196082408484,0.304464949114599,6.8054795338476,1.48282449604674,13.6727606794076,10.0580614294303,2.9063596805263,4.1012788951146,5.84924485615369,9.19189038572343,30.0225261728746,0.556275906031529,4.44264290074417,0.619160603889667,4.8150577116125,5.46268525313604,4.92099219795691,3.43167259809784,0.849892149969277,1.6794174278839,2.3493995546752,10.5013767981662,3.00519193902079,6.09958401380546,9.07244862903131,8.99079672862215,12.8833912610245,9.03591120778299,11.2408699786457,13.3495530411855,27.7376042844437,1.24267862617385,0.56369293868419,2.54178128274764,2.15096037594227,3.30567020184881,2.32487682259916,2.02747350588934,2.93393096614385,1.8228613878153,4.29923312145414,1.93267296660805,2.88030006257865,1.89606672376907,1.62180172232131,2.2596410576262,1.55904987573354,1.25318686967237,1.78813219303138,0.841368146639782,1.03382669022204,0.504832249740738,0.381034033274999,0.504130925684203,0.194915761479505,0.288635524920988,0.467507608726276,7.02864189207155,2.88581739386284,0.269141569828427,1.51096154727671,39.4106771825669,6.94425159169373,2.56412273974171,7.5028932677673,16.0503073291316,0.564751842617067,0.460325236507177,0,1.03111909406213,2.05524755931193,0.755393897389701,2.02506750069542,4.05289082901798,2.26571204492102,3.62432218226274,0.830298780673413,1.19707462020309,0.682934423016537,2.43106717068294,0.628839487883947,0.919217542250071,2.44471400581777,1.64828045791115,1.92551525755089,2.77966932940177,2.28131369901216,2.26351609663291,2.80924522409647,2.68905640100451,1.83793500657962,2.38146845641537,1.62238056322798,1.73618298417335,2.88460130562315,3.38557516309114,3.42869252385415,3.01708870470874,1.66905332963125,1.59881058295561,2.82328141245992,1.52306294205018,1.82927972872773,3.41990624869196,2.17286582153379,3.92799590160417,2.01679530811096,1.97008964751127,2.04615521584845,2.32405261778949,1.92906610981141,0.749431733813838,1.87145286756327,2.79332370262788,1.3390183244819,1.32354851471709,0.927471342481686 | |phase1_expression=3.20297694209588,31.7567620951819,29.1199513209303,93.1589770825037,105.188103288733,16.6200479192771,16.1192722010913,4.26106967357202,0,0.468129052643987,0,0.398860794976682,0,0.34968160967599,10.6595123781012,5.4668322195253,2.79824751251259,0.315462165358238,0.411343300817216,2.12194825899015,7.313722952992,0.0992909512008853,0,18.079143775655,17.2056960800378,20.6723507081407,21.9688618041128,20.2542958724736,38.1947073107312,29.4875251819119,13.5255611499736,12.065582795733,7.99584223859941,0,14.731432607315,9.30914014007557,14.2918549383658,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,3.77690453926732,3.04130793658544,2.56965453026354,0.782391344348039,0,0.219686182734472,1.36100929351998,1.39986421625363,0,0.335565212115473,0.725362142011344,0,3.60163210450326,2.86533439938757,4.12537673821954,0.606949382578793,0.528990979272033,0,2.71075625655306,2.66788438833342,0.899899717281399,0,0.7104801149461,0.898800331555214,0,0.414758449233911,0,0.420649922702764,0,0.441737081903227,0,0.383381884072945,0,2.20231761998777,0.638436690425939,0.46081959976873,0,0.0914876436024097,0.52091337055676,0.279182999001381,2.25105044012672,1.37518422999129,0.294628585473668,0.569486723196412,0.559198337475902,2.42323818666189,2.64500460373749,5.2175607966302,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,6.88177658645584,4.09032774187339,3.11743205523443,2.47337702157238,8.02807492727079,8.98285341900225,5.09610479413291,0,5.84525810730278,5.82727690592727,4.54972000513305,16.3282947998256,0,2.9688427812965,1.38788261412909,1.52232739156071,1.61430848079241,0.753613202763113,1.52865319276416,1.38233250462643,5.43828929015623,1.01219549843938,1.76922110389975,0.647067399789637,1.32504911076236,1.45462575940567,48.4618579167118,0.292780797011547,0.209446706813455,29.8884754594052,0.958520996047362,1.19980546198682,0.889491589511453,0.449371918214468,0.457500602818626,0,1.21677024134594,1.27857728665165,0.62336413367868,0.162241263067758,1.62942982160506,2.23932547098167,4.54900965180614,16.414464759145,1.43132487258974,0.689706313300419,0.720248519221397,1.65775299619287,2.78949646520444,5.50888997224854,6.37171727006156,25.8703370739016,0.431135985865684,2.45837904218165,0.879755620819744,0,0.834141747676794,0.696504333044333,1.64625709126355,1.19420560091096,0,0.772043721344145,0,1.86413195281952,3.28336483973535,2.34080679899319,2.3674473558521,1.77087808572663,2.93107514486019,0.930135779001631,2.68273401399619,1.63471479314037,1.6455984991348,0.820837320395476,1.05389452409612,1.16959989940266,1.09775057645525,1.47627060636409,1.05144974282064,0,59.8057997200674,16.9248362664668,2.13288250535234,3.0190767341857,10.3093969057675,22.386871233191,23.3496946037114,24.3488801424076,23.7264530772256,24.3754452991536,23.1228392096248,15.7175612912509,19.3014446247929,30.5598598942435,29.8270508827078,40.2265371973822,1.13800740571849,2.05647322697512,2.25415471346161,4.68398054044223,6.40043207653165,6.73303870947058,8.03104021478068,24.2080642686548,18.3688511574409,17.8925887686611,0.296452627087149,4.17112764290235,4.32429789249047,4.94696647246678,4.05720242777006,1.92941727801933,1.2731292589071,2.5892652370573,1.62135226775035,1.37280706594041,1.43768206527355,0,1.24815069245824,0.505157755894224,0.358794827043824,0.964887042726734,12.9327233116623,1.13694847062291,3.09633455239849,2.54617628662782,2.11221223459652,2.34508760418542,5.2369600994923,3.12213836572478,6.46304090835383,6.2010113101657,4.78364305972461,8.84861899464985,7.9435091658312,9.40218880779825,1.50791283939272,1.08781136763742,1.96705709207614,2.20749397043786,1.28440471990234,0.586058432961016,0.327869890753351,0.252470927204373,2.2085575359138,1.95219372148319,2.80050417052639,2.62865677747807,4.90157082981267,1.98153571552183,1.21443210502468,1.75353514746787,3.16230222357219,7.06906896127976,4.9679029822894,1.06839362200353,1.79175655288934,1.64970122972535,2.65490276679926,2.91336763385978,2.41858845571801,1.32023555829129,1.47650946440386,1.84461088766356,7.23599220871019,3.27180356529755,3.20847640546249,1.26414703174326,2.10837217149998,2.06271086496374,3.74483566329167,2.52085531643834,1.16422815404479,2.14337035031592,1.77340233642274,0.891844088010353,0.658196082408484,0.304464949114599,6.8054795338476,1.48282449604674,13.6727606794076,10.0580614294303,2.9063596805263,4.1012788951146,5.84924485615369,9.19189038572343,30.0225261728746,0.556275906031529,4.44264290074417,0.619160603889667,4.8150577116125,5.46268525313604,4.92099219795691,3.43167259809784,0.849892149969277,1.6794174278839,2.3493995546752,10.5013767981662,3.00519193902079,6.09958401380546,9.07244862903131,8.99079672862215,12.8833912610245,9.03591120778299,11.2408699786457,13.3495530411855,27.7376042844437,1.24267862617385,0.56369293868419,2.54178128274764,2.15096037594227,3.30567020184881,2.32487682259916,2.02747350588934,2.93393096614385,1.8228613878153,4.29923312145414,1.93267296660805,2.88030006257865,1.89606672376907,1.62180172232131,2.2596410576262,1.55904987573354,1.25318686967237,1.78813219303138,0.841368146639782,1.03382669022204,0.504832249740738,0.381034033274999,0.504130925684203,0.194915761479505,0.288635524920988,0.467507608726276,7.02864189207155,2.88581739386284,0.269141569828427,1.51096154727671,39.4106771825669,6.94425159169373,2.56412273974171,7.5028932677673,16.0503073291316,0.564751842617067,0.460325236507177,0,1.03111909406213,2.05524755931193,0.755393897389701,2.02506750069542,4.05289082901798,2.26571204492102,3.62432218226274,0.830298780673413,1.19707462020309,0.682934423016537,2.43106717068294,0.628839487883947,0.919217542250071,2.44471400581777,1.64828045791115,1.92551525755089,2.77966932940177,2.28131369901216,2.26351609663291,2.80924522409647,2.68905640100451,1.83793500657962,2.38146845641537,1.62238056322798,1.73618298417335,2.88460130562315,3.38557516309114,3.42869252385415,3.01708870470874,1.66905332963125,1.59881058295561,2.82328141245992,1.52306294205018,1.82927972872773,3.41990624869196,2.17286582153379,3.92799590160417,2.01679530811096,1.97008964751127,2.04615521584845,2.32405261778949,1.92906610981141,0.749431733813838,1.87145286756327,2.79332370262788,1.3390183244819,1.32354851471709,0.927471342481686 | ||
|short_description=p4@Slc12a6 | |short_description=p4@Slc12a6 | ||
}} | }} |
Latest revision as of 23:14, 1 October 2015
Short description: | p4@Slc12a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc12a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000053666_5end |
EntrezGene: | Slc12a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.51e-22 | 47 |
intestine | 2.90e-18 | 31 |
endoderm-derived structure | 2.04e-10 | 118 |
endoderm | 2.04e-10 | 118 |
presumptive endoderm | 2.04e-10 | 118 |
digestive system | 2.83e-10 | 116 |
digestive tract | 2.83e-10 | 116 |
primitive gut | 2.83e-10 | 116 |
mucosa | 5.30e-10 | 15 |
organ component layer | 1.46e-09 | 24 |
subdivision of digestive tract | 1.82e-09 | 114 |
intestinal mucosa | 6.09e-09 | 13 |
wall of intestine | 6.09e-09 | 13 |
gastrointestinal system mucosa | 6.09e-09 | 13 |
simple columnar epithelium | 8.59e-07 | 11 |