FFCP PHASE1:Mm9::chr8:36889489..36889539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71908 | |EntrezGene=71908 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7D7,Q3ULX4 | |UniProt=Q9D7D7,Q3ULX4 | ||
|association_with_transcript=73bp_to_ENSMUST00000060128,NM_027998,uc009llc.2_5end | |association_with_transcript=73bp_to_ENSMUST00000060128,NM_027998,uc009llc.2_5end | ||
|cluster_id=chr8:36889489..36889539,- | |||
|description=CAGE_peak_1_at_Cldn23_5end | |description=CAGE_peak_1_at_Cldn23_5end | ||
|id=chr8:36889489..36889539,- | |id=chr8:36889489..36889539,- | ||
|ontology_enrichment_celltype=CL:0002563!5.23e-07!9;CL:0002251!5.23e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.85e-08,9;CL:0002251,1.85e-08,9;CL:0000066,1.90e-08,25;CL:0000075,1.62e-07,7;CL:0002076,7.09e-07,15;CL:0000239,7.24e-07,6;CL:0000677,7.24e-07,6;CL:0000584,7.24e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.07e-16!59;UBERON:0000160!5.31e-16!43;UBERON:0000344!6.21e-11!15;UBERON:0001242!1.09e-09!13;UBERON:0000060!1.09e-09!13;UBERON:0001262!1.09e-09!13;UBERON:0004786!1.09e-09!13;UBERON:0004119!8.20e-09!130;UBERON:0000925!8.20e-09!130;UBERON:0006595!8.20e-09!130;UBERON:0001007!1.74e-08!128;UBERON:0001555!1.74e-08!128;UBERON:0007026!1.74e-08!128;UBERON:0000485!9.38e-08!11;UBERON:0004921!1.06e-07!126;UBERON:0004185!1.06e-07!126;UBERON:0003350!5.23e-07!9;UBERON:0004808!5.23e-07!9;UBERON:0001277!5.23e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.17e-24,47;UBERON:0000160,2.48e-23,31;UBERON:0000344,2.03e-13,15;UBERON:0001242,7.65e-12,13;UBERON:0001262,7.65e-12,13;UBERON:0004786,7.65e-12,13;UBERON:0000485,2.12e-09,11;UBERON:0004119,7.43e-09,118;UBERON:0000925,7.43e-09,118;UBERON:0006595,7.43e-09,118;UBERON:0001007,8.98e-09,116;UBERON:0001555,8.98e-09,116;UBERON:0007026,8.98e-09,116;UBERON:0004923,1.42e-08,24;UBERON:0003350,1.85e-08,9;UBERON:0004808,1.85e-08,9;UBERON:0001277,1.85e-08,9;UBERON:0004921,7.43e-08,114 | |||
|phase1_expression=3.68342348341026,54.4401635917403,66.4298889508723,71.3815538684119,108.193477668411,60.7722964321041,46.2553028379141,0,0,0.468129052643987,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.8064285749853,0,0,27.9986739888462,37.3937128139487,43.6416292727415,46.5222955851801,52.1440383099851,52.4464637699592,32.5118867390311,64.745309111349,0,0,0,12.7094712690561,9.47537478543406,12.6585000882669,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0.791317726381163,0.640413505216868,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.226714680320357,2.89864488701678,0,1.3599426674155,0,0,0,2.38755514223978,0,0,0,16.3378366940949,0,0,0,10.6080610095495,8.10751569520315,7.58286667522175,6.16592950482924,0,0,0,0.304465478312141,0.691846491768175,0,0.352766121407114,0.125666591329675,8.40462890296871,0,0,0,0,0,41.0061874679869,0.292780797011547,0,38.0631012260801,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.20778804455956,0,0.916554274652847,1.24406970610093,9.09801930361229,4.62972082950243,0.390361328888111,1.14951052216736,0.540186389416048,2.41127708537144,1.02054748726992,0.896796041993948,0.749613796477831,3.3631438196072,0.646703978798527,1.32374256117473,0.879755620819744,2.19195732427575,8.34141747676794,9.05455632957633,9.87754254758129,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,0.210289948564127,0.205809224758569,44.9369544857965,14.2803305998314,1.06644125267617,2.32236671860439,12.2424088255989,12.7060620512706,10.0070119730192,10.6526350623033,22.302865892592,14.987604879885,21.1121575392226,29.4455578620903,23.9805827156518,20.6728463990471,31.123879181956,27.4814957091027,2.84501851429623,0.456994050438915,1.1270773567308,1.01825663922657,1.16371492300575,1.19230893813542,0.0632365371242573,0.147610147979602,0,0.370191491765402,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,1.48856379067401,0.312037673114561,0,0.179397413521912,0.482443521363367,1.84753190166605,0.189491411770485,0.162964976442026,0.509235257325564,0.938760993154008,0.335012514883631,0.238043640886014,3.70753930929818,1.10344600874334,1.10732344824387,0.956728611944923,1.3109065177259,0.690739927463582,1.01254341007058,0,0,0,0,0,0,0,0,0,0.390438744296638,2.15423397732799,0,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0,0,2.12910127812403,0.890328018336276,0.651547837414304,5.77395430403874,0,0.971122544619926,3.62788268357701,0.188605079755898,1.77181135728464,0.614870295887855,4.39328098385976,1.45413491791002,2.49548164869305,0,4.21674434299995,0,3.74483566329167,0.900305470156551,1.16422815404479,1.28602221018955,1.77340233642274,0.356737635204141,1.48094118541909,4.26250928760439,0.704015124191131,4.87213762986786,11.0264199027481,13.3557864882599,17.7610869365496,10.0119455380739,12.4147237763262,11.8181447816444,19.8206968908299,0,0,1.03193433981611,0,0,0,0,0,0.419854356970974,0,12.4107180341965,1.42351197111511,5.69294507955176,12.7446302169725,15.4725339050707,18.7791804821713,15.1048067950999,14.1337409290324,11.2555055053133,59.6228877142247,3.10669656543463,0,0,0.165458490457098,0,0,0.506868376472335,0.352071715937262,0,0.104859344425711,0,1.15212002503146,0.316011120628178,0,0.513554785824136,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.504832249740738,0.0762068066549998,0,0,0.0962118416403295,0.350630706544707,9.9761368790693,0,0,1.17519231454855,11.0118068598349,1.50145980360946,16.8499494325884,24.6523635940926,11.5361583928134,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.31136204275253,0.798049746802062,1.36586884603307,4.86213434136588,0.628839487883947,0.735374033800057,1.55572709461131,0.824140228955577,1.60459604795908,2.02157769411038,2.5347929989024,1.50901073108861,1.31098110457835,0.832326981263301,1.7230640686684,0,1.15884325944855,0.77163688185482,0.824171801606613,1.17759136107518,1.71434626192708,1.59728225543404,1.66905332963125,1.16277133305863,1.59985946706062,2.11536519729191,0.914639864363863,1.57841826862706,2.8518863907631,1.68342681497322,1.18635018124174,2.06859412988683,1.22769312950907,1.70430525304563,5.20847849649082,7.99393849401427,6.31615342802603,7.52048689169044,0.956441660344217,3.30887128679273,0.231867835620421 | |phase1_expression=3.68342348341026,54.4401635917403,66.4298889508723,71.3815538684119,108.193477668411,60.7722964321041,46.2553028379141,0,0,0.468129052643987,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.8064285749853,0,0,27.9986739888462,37.3937128139487,43.6416292727415,46.5222955851801,52.1440383099851,52.4464637699592,32.5118867390311,64.745309111349,0,0,0,12.7094712690561,9.47537478543406,12.6585000882669,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0.791317726381163,0.640413505216868,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.226714680320357,2.89864488701678,0,1.3599426674155,0,0,0,2.38755514223978,0,0,0,16.3378366940949,0,0,0,10.6080610095495,8.10751569520315,7.58286667522175,6.16592950482924,0,0,0,0.304465478312141,0.691846491768175,0,0.352766121407114,0.125666591329675,8.40462890296871,0,0,0,0,0,41.0061874679869,0.292780797011547,0,38.0631012260801,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.20778804455956,0,0.916554274652847,1.24406970610093,9.09801930361229,4.62972082950243,0.390361328888111,1.14951052216736,0.540186389416048,2.41127708537144,1.02054748726992,0.896796041993948,0.749613796477831,3.3631438196072,0.646703978798527,1.32374256117473,0.879755620819744,2.19195732427575,8.34141747676794,9.05455632957633,9.87754254758129,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,0.210289948564127,0.205809224758569,44.9369544857965,14.2803305998314,1.06644125267617,2.32236671860439,12.2424088255989,12.7060620512706,10.0070119730192,10.6526350623033,22.302865892592,14.987604879885,21.1121575392226,29.4455578620903,23.9805827156518,20.6728463990471,31.123879181956,27.4814957091027,2.84501851429623,0.456994050438915,1.1270773567308,1.01825663922657,1.16371492300575,1.19230893813542,0.0632365371242573,0.147610147979602,0,0.370191491765402,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,1.48856379067401,0.312037673114561,0,0.179397413521912,0.482443521363367,1.84753190166605,0.189491411770485,0.162964976442026,0.509235257325564,0.938760993154008,0.335012514883631,0.238043640886014,3.70753930929818,1.10344600874334,1.10732344824387,0.956728611944923,1.3109065177259,0.690739927463582,1.01254341007058,0,0,0,0,0,0,0,0,0,0.390438744296638,2.15423397732799,0,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0,0,2.12910127812403,0.890328018336276,0.651547837414304,5.77395430403874,0,0.971122544619926,3.62788268357701,0.188605079755898,1.77181135728464,0.614870295887855,4.39328098385976,1.45413491791002,2.49548164869305,0,4.21674434299995,0,3.74483566329167,0.900305470156551,1.16422815404479,1.28602221018955,1.77340233642274,0.356737635204141,1.48094118541909,4.26250928760439,0.704015124191131,4.87213762986786,11.0264199027481,13.3557864882599,17.7610869365496,10.0119455380739,12.4147237763262,11.8181447816444,19.8206968908299,0,0,1.03193433981611,0,0,0,0,0,0.419854356970974,0,12.4107180341965,1.42351197111511,5.69294507955176,12.7446302169725,15.4725339050707,18.7791804821713,15.1048067950999,14.1337409290324,11.2555055053133,59.6228877142247,3.10669656543463,0,0,0.165458490457098,0,0,0.506868376472335,0.352071715937262,0,0.104859344425711,0,1.15212002503146,0.316011120628178,0,0.513554785824136,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.504832249740738,0.0762068066549998,0,0,0.0962118416403295,0.350630706544707,9.9761368790693,0,0,1.17519231454855,11.0118068598349,1.50145980360946,16.8499494325884,24.6523635940926,11.5361583928134,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.31136204275253,0.798049746802062,1.36586884603307,4.86213434136588,0.628839487883947,0.735374033800057,1.55572709461131,0.824140228955577,1.60459604795908,2.02157769411038,2.5347929989024,1.50901073108861,1.31098110457835,0.832326981263301,1.7230640686684,0,1.15884325944855,0.77163688185482,0.824171801606613,1.17759136107518,1.71434626192708,1.59728225543404,1.66905332963125,1.16277133305863,1.59985946706062,2.11536519729191,0.914639864363863,1.57841826862706,2.8518863907631,1.68342681497322,1.18635018124174,2.06859412988683,1.22769312950907,1.70430525304563,5.20847849649082,7.99393849401427,6.31615342802603,7.52048689169044,0.956441660344217,3.30887128679273,0.231867835620421 | ||
|short_description=p1@Cldn23 | |short_description=p1@Cldn23 | ||
}} | }} |
Latest revision as of 23:06, 1 October 2015
Short description: | p1@Cldn23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cldn23_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 73bp_to_ENSMUST00000060128, NM_027998, uc009llc.2_5end |
EntrezGene: | Cldn23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.85e-08 | 9 |
epithelial cell of alimentary canal | 1.85e-08 | 9 |
epithelial cell | 1.90e-08 | 25 |
columnar/cuboidal epithelial cell | 1.62e-07 | 7 |
endo-epithelial cell | 7.09e-07 | 15 |
brush border epithelial cell | 7.24e-07 | 6 |
gut absorptive cell | 7.24e-07 | 6 |
enterocyte | 7.24e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.17e-24 | 47 |
intestine | 2.48e-23 | 31 |
mucosa | 2.03e-13 | 15 |
intestinal mucosa | 7.65e-12 | 13 |
wall of intestine | 7.65e-12 | 13 |
gastrointestinal system mucosa | 7.65e-12 | 13 |
simple columnar epithelium | 2.12e-09 | 11 |
endoderm-derived structure | 7.43e-09 | 118 |
endoderm | 7.43e-09 | 118 |
presumptive endoderm | 7.43e-09 | 118 |
digestive system | 8.98e-09 | 116 |
digestive tract | 8.98e-09 | 116 |
primitive gut | 8.98e-09 | 116 |
organ component layer | 1.42e-08 | 24 |
epithelium of mucosa | 1.85e-08 | 9 |
gastrointestinal system epithelium | 1.85e-08 | 9 |
intestinal epithelium | 1.85e-08 | 9 |
subdivision of digestive tract | 7.43e-08 | 114 |