FFCP PHASE1:Mm9::chr2:105522662..105522687,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18508 | |EntrezGene=18508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=F6VV60 | |UniProt=F6VV60 | ||
|association_with_transcript=0bp_to_ENSMUST00000135412_5end | |association_with_transcript=0bp_to_ENSMUST00000135412_5end | ||
|cluster_id=chr2:105522662..105522687,+ | |||
|description=CAGE_peak_2_at_Pax6_5end | |description=CAGE_peak_2_at_Pax6_5end | ||
|id=chr2:105522662..105522687,+ | |id=chr2:105522662..105522687,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.24e-13,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.93e-17!63;UBERON:0003056!6.82e-14!49;UBERON:0000970!1.93e-13!9;UBERON:0000019!1.93e-13!9;UBERON:0000047!1.93e-13!9;UBERON:0004088!1.93e-13!9;UBERON:0002104!1.93e-13!9;UBERON:0001456!1.93e-13!9;UBERON:0003072!1.93e-13!9;UBERON:0003071!1.93e-13!9;UBERON:0004128!1.93e-13!9;UBERON:0002346!7.32e-12!71;UBERON:0003075!7.32e-12!71;UBERON:0007284!7.32e-12!71;UBERON:0000955!1.41e-10!50;UBERON:0006238!1.41e-10!50;UBERON:0001444!1.73e-10!11;UBERON:0007811!6.94e-10!86;UBERON:0002616!8.31e-10!49;UBERON:0000020!2.19e-09!12;UBERON:0001032!2.19e-09!12;UBERON:0004456!2.19e-09!12;UBERON:0004121!1.67e-08!102;UBERON:0000924!1.67e-08!102;UBERON:0006601!1.67e-08!102;UBERON:0005085!1.85e-08!13;UBERON:0000153!3.44e-08!94;UBERON:0001049!9.67e-08!52;UBERON:0005068!9.67e-08!52;UBERON:0006241!9.67e-08!52;UBERON:0007135!9.67e-08!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.06e-41,9;UBERON:0000019,3.06e-41,9;UBERON:0000047,3.06e-41,9;UBERON:0010312,3.06e-41,9;UBERON:0004088,3.06e-41,9;UBERON:0002104,3.06e-41,9;UBERON:0001456,3.06e-41,9;UBERON:0003072,3.06e-41,9;UBERON:0004128,3.06e-41,9;UBERON:0003071,3.06e-41,9;UBERON:0001444,1.58e-33,11;UBERON:0000020,1.24e-30,12;UBERON:0001032,1.24e-30,12;UBERON:0004456,1.24e-30,12;UBERON:0000033,3.49e-28,13;UBERON:0005085,3.49e-28,13;UBERON:0003056,4.43e-16,49;UBERON:0002346,1.09e-13,64;UBERON:0003075,1.09e-13,64;UBERON:0007284,1.09e-13,64;UBERON:0010371,1.08e-11,73;UBERON:0004121,9.88e-10,95;UBERON:0000924,9.88e-10,95;UBERON:0006601,9.88e-10,95;UBERON:0007811,2.41e-09,36;UBERON:0010314,9.28e-09,92;UBERON:0000369,3.09e-08,5;UBERON:0002435,3.09e-08,5;UBERON:0000204,3.09e-08,5;UBERON:0010082,3.09e-08,5;UBERON:0000153,1.33e-07,43 | |||
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|short_description=p2@Pax6 | |short_description=p2@Pax6 | ||
}} | }} |
Latest revision as of 22:25, 1 October 2015
Short description: | p2@Pax6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pax6_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 0bp_to_ENSMUST00000135412_5end |
EntrezGene: | Pax6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.24e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 3.06e-41 | 9 |
camera-type eye | 3.06e-41 | 9 |
simple eye | 3.06e-41 | 9 |
immature eye | 3.06e-41 | 9 |
ocular region | 3.06e-41 | 9 |
visual system | 3.06e-41 | 9 |
face | 3.06e-41 | 9 |
optic cup | 3.06e-41 | 9 |
optic vesicle | 3.06e-41 | 9 |
eye primordium | 3.06e-41 | 9 |
subdivision of head | 1.58e-33 | 11 |
sense organ | 1.24e-30 | 12 |
sensory system | 1.24e-30 | 12 |
entire sense organ system | 1.24e-30 | 12 |
head | 3.49e-28 | 13 |
ectodermal placode | 3.49e-28 | 13 |
pre-chordal neural plate | 4.43e-16 | 49 |
neurectoderm | 1.09e-13 | 64 |
neural plate | 1.09e-13 | 64 |
presumptive neural plate | 1.09e-13 | 64 |
ecto-epithelium | 1.08e-11 | 73 |
ectoderm-derived structure | 9.88e-10 | 95 |
ectoderm | 9.88e-10 | 95 |
presumptive ectoderm | 9.88e-10 | 95 |
craniocervical region | 2.41e-09 | 36 |
structure with developmental contribution from neural crest | 9.28e-09 | 92 |
corpus striatum | 3.09e-08 | 5 |
striatum | 3.09e-08 | 5 |
ventral part of telencephalon | 3.09e-08 | 5 |
future corpus striatum | 3.09e-08 | 5 |
anterior region of body | 1.33e-07 | 43 |