FFCP PHASE1:Mm9::chr13:73838169..73838176,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74338 | |EntrezGene=74338 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q3KN89,Q9D687 | |UniProt=Q3KN89,Q9D687 | ||
|association_with_transcript=-26bp_to_ENSMUST00000132085,NM_028878,uc007rdy.1,uc011zbs.1_5end | |association_with_transcript=-26bp_to_ENSMUST00000132085,NM_028878,uc007rdy.1,uc011zbs.1_5end | ||
|cluster_id=chr13:73838169..73838176,- | |||
|description=CAGE_peak_3_at_Slc6a19_5end | |description=CAGE_peak_3_at_Slc6a19_5end | ||
|id=chr13:73838169..73838176,- | |id=chr13:73838169..73838176,- | ||
|ontology_enrichment_celltype=CL:0000239!2.69e-08!6;CL:0000677!2.69e-08!6;CL:0000212!2.69e-08!6;CL:0000584!2.69e-08!6;CL:0002563!5.73e-08!9;CL:0002251!5.73e-08!9;CL:0000075!6.43e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.54e-13,6;CL:0000677,2.54e-13,6;CL:0000584,2.54e-13,6;CL:0000075,2.66e-11,7;CL:0002563,1.31e-08,9;CL:0002251,1.31e-08,9;CL:0000682,2.41e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.43e-17!43;UBERON:0005409!2.77e-17!59;UBERON:0000344!1.77e-14!15;UBERON:0001242!2.38e-12!13;UBERON:0000060!2.38e-12!13;UBERON:0001262!2.38e-12!13;UBERON:0004786!2.38e-12!13;UBERON:0004923!6.62e-10!24;UBERON:0003350!5.73e-08!9;UBERON:0004808!5.73e-08!9;UBERON:0001277!5.73e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.33e-37,31;UBERON:0005409,8.50e-29,47;UBERON:0000344,2.55e-19,15;UBERON:0001242,9.62e-16,13;UBERON:0001262,9.62e-16,13;UBERON:0004786,9.62e-16,13;UBERON:0004923,6.27e-13,24;UBERON:0001007,2.12e-10,116;UBERON:0001555,2.12e-10,116;UBERON:0007026,2.12e-10,116;UBERON:0004119,4.21e-10,118;UBERON:0000925,4.21e-10,118;UBERON:0006595,4.21e-10,118;UBERON:0002108,6.18e-09,4;UBERON:0004921,8.28e-09,114;UBERON:0003350,1.31e-08,9;UBERON:0004808,1.31e-08,9;UBERON:0001277,1.31e-08,9;UBERON:0000331,3.94e-07,3;UBERON:0002116,3.94e-07,3;UBERON:0001204,3.94e-07,3;UBERON:0001168,3.94e-07,3;UBERON:0000485,6.74e-07,11 | |||
|phase1_expression=0,5.58360652222978,8.64498554840118,7.86406949397758,14.0250804384977,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,4.12936705920906,4.59385571292016,3.4460959692726,3.66301095566011,5.32065574477847,2.26827116783938,2.88249663851896,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,1.39300866608867,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,6.34681359992506,0,0,0.257734922644187,2.42020229548011,2.00140239460383,3.61428689613862,7.11793592316767,7.24675400785648,4.02136334080431,6.76452004939913,4.48417400373976,4.49409704327111,4.10662294761919,5.77509692437665,0,0,0,0,0.193952487167626,0.280543279561274,0.505892296994058,1.32849133181642,1.09899109488962,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,1.15420377059036,0.968786560175433,0.72375509913787,1.19372344003136,0.492422699235184,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,1.25452977608681,0.218362563746178,0.674321731924103,1.1571483801547,2.09404753587224,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.384150914429216,0.17230640686684,0.476293691283074,0.463537303779422,0,0,0.588795680537589,0,0.532427418478012,0,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0.154936841185966,0.192906610981141,0.499621155875892,1.40358965067245,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,5.58360652222978,8.64498554840118,7.86406949397758,14.0250804384977,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,4.12936705920906,4.59385571292016,3.4460959692726,3.66301095566011,5.32065574477847,2.26827116783938,2.88249663851896,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,1.39300866608867,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,6.34681359992506,0,0,0.257734922644187,2.42020229548011,2.00140239460383,3.61428689613862,7.11793592316767,7.24675400785648,4.02136334080431,6.76452004939913,4.48417400373976,4.49409704327111,4.10662294761919,5.77509692437665,0,0,0,0,0.193952487167626,0.280543279561274,0.505892296994058,1.32849133181642,1.09899109488962,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,1.15420377059036,0.968786560175433,0.72375509913787,1.19372344003136,0.492422699235184,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,1.25452977608681,0.218362563746178,0.674321731924103,1.1571483801547,2.09404753587224,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.384150914429216,0.17230640686684,0.476293691283074,0.463537303779422,0,0,0.588795680537589,0,0.532427418478012,0,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0.154936841185966,0.192906610981141,0.499621155875892,1.40358965067245,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p3@Slc6a19 | |short_description=p3@Slc6a19 | ||
}} | }} |
Latest revision as of 22:18, 1 October 2015
Short description: | p3@Slc6a19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc6a19_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -26bp_to_ENSMUST00000132085, NM_028878, uc007rdy.1, uc011zbs.1_5end |
EntrezGene: | Slc6a19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.54e-13 | 6 |
gut absorptive cell | 2.54e-13 | 6 |
enterocyte | 2.54e-13 | 6 |
columnar/cuboidal epithelial cell | 2.66e-11 | 7 |
intestinal epithelial cell | 1.31e-08 | 9 |
epithelial cell of alimentary canal | 1.31e-08 | 9 |
M cell of gut | 2.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.33e-37 | 31 |
gastrointestinal system | 8.50e-29 | 47 |
mucosa | 2.55e-19 | 15 |
intestinal mucosa | 9.62e-16 | 13 |
wall of intestine | 9.62e-16 | 13 |
gastrointestinal system mucosa | 9.62e-16 | 13 |
organ component layer | 6.27e-13 | 24 |
digestive system | 2.12e-10 | 116 |
digestive tract | 2.12e-10 | 116 |
primitive gut | 2.12e-10 | 116 |
endoderm-derived structure | 4.21e-10 | 118 |
endoderm | 4.21e-10 | 118 |
presumptive endoderm | 4.21e-10 | 118 |
small intestine | 6.18e-09 | 4 |
subdivision of digestive tract | 8.28e-09 | 114 |
epithelium of mucosa | 1.31e-08 | 9 |
gastrointestinal system epithelium | 1.31e-08 | 9 |
intestinal epithelium | 1.31e-08 | 9 |
ileal mucosa | 3.94e-07 | 3 |
ileum | 3.94e-07 | 3 |
mucosa of small intestine | 3.94e-07 | 3 |
wall of small intestine | 3.94e-07 | 3 |
simple columnar epithelium | 6.74e-07 | 11 |