FFCP PHASE1:Mm9::chr2:104250710..104250725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241589 | |EntrezGene=241589 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=D3YZ21,E9Q533 | |UniProt=D3YZ21,E9Q533 | ||
|association_with_transcript=-219bp_to_ENSMUST00000089726,ENSMUST00000165018,NM_001033347,uc008ljr.1_5end | |association_with_transcript=-219bp_to_ENSMUST00000089726,ENSMUST00000165018,NM_001033347,uc008ljr.1_5end | ||
|cluster_id=chr2:104250710..104250725,- | |||
|description=CAGE_peak_4_at_D430041D05Rik_5end | |description=CAGE_peak_4_at_D430041D05Rik_5end | ||
|id=chr2:104250710..104250725,- | |id=chr2:104250710..104250725,- | ||
|ontology_enrichment_celltype=CL:0000117!2.53e-16!23;CL:0000337!2.53e-16!23;CL:0000540!1.36e-11!33;CL:0000047!1.36e-11!33;CL:0000031!1.36e-11!33;CL:0000404!1.36e-11!33;CL:0000221!1.53e-09!44;CL:0000133!1.53e-09!44;CL:0002319!3.05e-09!43;CL:0000393!4.51e-08!39;CL:0000211!4.51e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.53e-16!23;CL:0000337!2.53e-16!23;CL:0000540!1.36e-11!33;CL:0000047!1.36e-11!33;CL:0000031!1.36e-11!33;CL:0000404!1.36e-11!33;CL:0000221!1.53e-09!44;CL:0000133!1.53e-09!44;CL:0002319!3.05e-09!43;CL:0000393!4.51e-08!39;CL:0000211!4.51e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.73e-32,23;CL:0000337,1.73e-32,23;CL:0000540,1.24e-20,33;CL:0000047,1.24e-20,33;CL:0000031,1.24e-20,33;CL:0000404,1.24e-20,33;CL:0000393,1.82e-16,39;CL:0000211,1.82e-16,39;CL:0002319,9.13e-16,43;CL:0000221,2.94e-15,44;CL:0000133,2.94e-15,44;CL:0002609,2.47e-08,6;CL:0002321,2.75e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.05e-24!73;UBERON:0005743!2.05e-24!73;UBERON:0000073!2.70e-24!75;UBERON:0001016!2.70e-24!75;UBERON:0001049!9.22e-24!52;UBERON:0005068!9.22e-24!52;UBERON:0006241!9.22e-24!52;UBERON:0007135!9.22e-24!52;UBERON:0004121!1.45e-23!102;UBERON:0000924!1.45e-23!102;UBERON:0006601!1.45e-23!102;UBERON:0002346!2.35e-23!71;UBERON:0003075!2.35e-23!71;UBERON:0007284!2.35e-23!71;UBERON:0000033!5.58e-22!63;UBERON:0000955!1.20e-21!50;UBERON:0006238!1.20e-21!50;UBERON:0002616!3.82e-21!49;UBERON:0002020!1.10e-20!34;UBERON:0003056!2.59e-17!49;UBERON:0003080!3.36e-17!40;UBERON:0002791!6.81e-17!29;UBERON:0003528!6.81e-17!29;UBERON:0001893!6.81e-17!29;UBERON:0002780!1.87e-16!39;UBERON:0001890!1.87e-16!39;UBERON:0006240!1.87e-16!39;UBERON:0007811!2.87e-15!86;UBERON:0000153!2.50e-14!94;UBERON:0000956!7.04e-12!21;UBERON:0001869!7.04e-12!21;UBERON:0000203!7.04e-12!21;UBERON:0002619!1.64e-09!17;UBERON:0002021!1.28e-08!10;UBERON:0000411!1.28e-08!10;UBERON:0001950!1.28e-08!10;UBERON:0003076!3.32e-07!12;UBERON:0003057!3.32e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.05e-24!73;UBERON:0005743!2.05e-24!73;UBERON:0000073!2.70e-24!75;UBERON:0001016!2.70e-24!75;UBERON:0001049!9.22e-24!52;UBERON:0005068!9.22e-24!52;UBERON:0006241!9.22e-24!52;UBERON:0007135!9.22e-24!52;UBERON:0004121!1.45e-23!102;UBERON:0000924!1.45e-23!102;UBERON:0006601!1.45e-23!102;UBERON:0002346!2.35e-23!71;UBERON:0003075!2.35e-23!71;UBERON:0007284!2.35e-23!71;UBERON:0000033!5.58e-22!63;UBERON:0000955!1.20e-21!50;UBERON:0006238!1.20e-21!50;UBERON:0002616!3.82e-21!49;UBERON:0002020!1.10e-20!34;UBERON:0003056!2.59e-17!49;UBERON:0003080!3.36e-17!40;UBERON:0002791!6.81e-17!29;UBERON:0003528!6.81e-17!29;UBERON:0001893!6.81e-17!29;UBERON:0002780!1.87e-16!39;UBERON:0001890!1.87e-16!39;UBERON:0006240!1.87e-16!39;UBERON:0007811!2.87e-15!86;UBERON:0000153!2.50e-14!94;UBERON:0000956!7.04e-12!21;UBERON:0001869!7.04e-12!21;UBERON:0000203!7.04e-12!21;UBERON:0002619!1.64e-09!17;UBERON:0002021!1.28e-08!10;UBERON:0000411!1.28e-08!10;UBERON:0001950!1.28e-08!10;UBERON:0003076!3.32e-07!12;UBERON:0003057!3.32e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.31e-46,54;UBERON:0001049,2.02e-43,52;UBERON:0005068,2.02e-43,52;UBERON:0006241,2.02e-43,52;UBERON:0007135,2.02e-43,52;UBERON:0002020,2.42e-43,34;UBERON:0001017,1.52e-41,73;UBERON:0001016,4.07e-40,75;UBERON:0003528,2.69e-35,29;UBERON:0002791,2.69e-35,29;UBERON:0001893,2.69e-35,29;UBERON:0002616,5.62e-34,46;UBERON:0002346,3.12e-33,64;UBERON:0003075,3.12e-33,64;UBERON:0007284,3.12e-33,64;UBERON:0000955,4.76e-33,47;UBERON:0006238,4.76e-33,47;UBERON:0003080,2.29e-30,40;UBERON:0004121,3.85e-29,95;UBERON:0000924,3.85e-29,95;UBERON:0006601,3.85e-29,95;UBERON:0002780,7.47e-29,39;UBERON:0001890,7.47e-29,39;UBERON:0006240,7.47e-29,39;UBERON:0010371,8.56e-28,73;UBERON:0000956,1.09e-24,21;UBERON:0001869,1.09e-24,21;UBERON:0000203,1.09e-24,21;UBERON:0003056,3.24e-23,49;UBERON:0010314,7.95e-20,92;UBERON:0002619,1.08e-19,17;UBERON:0002021,2.54e-16,10;UBERON:0000411,2.54e-16,10;UBERON:0001950,2.54e-16,10;UBERON:0000025,5.94e-14,114;UBERON:0003076,7.13e-13,12;UBERON:0003057,7.13e-13,12;UBERON:0004111,2.37e-12,122;UBERON:0002420,1.89e-11,8;UBERON:0007245,1.89e-11,8;UBERON:0010009,1.89e-11,8;UBERON:0010011,1.89e-11,8;UBERON:0000454,1.89e-11,8;UBERON:0002240,1.29e-10,6;UBERON:0005174,1.29e-10,6;UBERON:0001137,1.29e-10,6;UBERON:0001948,5.93e-09,5;UBERON:0002315,5.93e-09,5;UBERON:0000369,3.02e-08,5;UBERON:0002435,3.02e-08,5;UBERON:0000204,3.02e-08,5;UBERON:0010082,3.02e-08,5;UBERON:0011216,3.40e-08,194 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,3.43937983461316,6.34789175126439,7.60597684207415,0,0,0,0,0,0,1.92109152660777,1.34796496001021,2.70011876663381,2.10324961351382,5.71301968807607,3.75476519617743,1.71487118900936,2.20444583341944,4.5960939330501,4.40463523997555,3.19218345212969,3.5329502648936,4.74790635828698,6.22115976496386,4.16730696445408,3.90856198601933,1.12552522006336,1.68078072554491,7.36571463684169,4.41352210477219,4.28718725398191,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0.628332956648377,0,0,0,0,0.220841518460394,0,0,3.51336956413857,5.86450779077674,0,0,0,0,4.94309110035915,1.37250180845588,3.5183218591602,5.9100268865374,4.85859368927628,4.77912502486988,4.54275536589721,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,10.2904612379284,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,2.88991061978026,4.10240903072711,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.314578033277133,0,0,0,0.810900861160657,0.102710957164827,0.389762468933385,0.179026695667481,0.198681354781265,0.360586348559907,0,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0,0.226730383615211,0,0.358855426437903,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,6.7770221114048,5.06357760157895,3.43737308063638,3.60891682921744,4.11049511862385,5.2877572817279,6.07520250208625,4.5032120322422,4.98456649882625,4.65984280576638,0.518936737920883,1.99512436700516,0.853668028770671,0.972426868273176,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,0.25347929989024,0.377252682772152,0.655490552289177,0.960377286073039,0.804096565378586,1.42888107384922,0.927074607558844,0.38581844092741,1.64834360321323,0.883193520806384,0.685738504770831,1.06485483695602,0.953744759789284,1.74415699958794,0.470546902076653,0.676916863133412,0.548783918618318,1.05227884575137,0.407412341537585,2.24456908663095,1.54225523561426,0.788035859004508,0.818462086339379,0.309873682371932,0.771626443924566,1.74867404556562,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,3.43937983461316,6.34789175126439,7.60597684207415,0,0,0,0,0,0,1.92109152660777,1.34796496001021,2.70011876663381,2.10324961351382,5.71301968807607,3.75476519617743,1.71487118900936,2.20444583341944,4.5960939330501,4.40463523997555,3.19218345212969,3.5329502648936,4.74790635828698,6.22115976496386,4.16730696445408,3.90856198601933,1.12552522006336,1.68078072554491,7.36571463684169,4.41352210477219,4.28718725398191,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0.628332956648377,0,0,0,0,0.220841518460394,0,0,3.51336956413857,5.86450779077674,0,0,0,0,4.94309110035915,1.37250180845588,3.5183218591602,5.9100268865374,4.85859368927628,4.77912502486988,4.54275536589721,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,10.2904612379284,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,2.88991061978026,4.10240903072711,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.314578033277133,0,0,0,0.810900861160657,0.102710957164827,0.389762468933385,0.179026695667481,0.198681354781265,0.360586348559907,0,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0,0.226730383615211,0,0.358855426437903,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,6.7770221114048,5.06357760157895,3.43737308063638,3.60891682921744,4.11049511862385,5.2877572817279,6.07520250208625,4.5032120322422,4.98456649882625,4.65984280576638,0.518936737920883,1.99512436700516,0.853668028770671,0.972426868273176,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,0.25347929989024,0.377252682772152,0.655490552289177,0.960377286073039,0.804096565378586,1.42888107384922,0.927074607558844,0.38581844092741,1.64834360321323,0.883193520806384,0.685738504770831,1.06485483695602,0.953744759789284,1.74415699958794,0.470546902076653,0.676916863133412,0.548783918618318,1.05227884575137,0.407412341537585,2.24456908663095,1.54225523561426,0.788035859004508,0.818462086339379,0.309873682371932,0.771626443924566,1.74867404556562,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0 | ||
|short_description=p4@D430041D05Rik | |short_description=p4@D430041D05Rik | ||
}} | }} |
Latest revision as of 22:02, 1 October 2015
Short description: | p4@D430041D05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_D430041D05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -219bp_to_ENSMUST00000089726, ENSMUST00000165018, NM_001033347, uc008ljr.1_5end |
EntrezGene: | D430041D05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.73e-32 | 23 |
neuroblast (sensu Vertebrata) | 1.73e-32 | 23 |
neuron | 1.24e-20 | 33 |
neuronal stem cell | 1.24e-20 | 33 |
neuroblast | 1.24e-20 | 33 |
electrically signaling cell | 1.24e-20 | 33 |
electrically responsive cell | 1.82e-16 | 39 |
electrically active cell | 1.82e-16 | 39 |
neural cell | 9.13e-16 | 43 |
ectodermal cell | 2.94e-15 | 44 |
neurectodermal cell | 2.94e-15 | 44 |
neuron of cerebral cortex | 2.47e-08 | 6 |
embryonic cell | 2.75e-07 | 70 |