FFCP PHASE1:Mm9::chr3:27216028..27216039,+: Difference between revisions
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{{FFCP|EntrezGene=22035|HGNC=|MCL_coexpression_id=3404|UniProt=P50592,Q3U5H0,Q3UQ13|association_with_transcript=29bp_to_NM_009425,uc008otm.1,uc008otn.1_5end|description=CAGE_peak_2_at_Tnfsf10_5end|id=chr3:27216028..27216039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,7.63e-09,9;CL:0002251,7.63e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.73e-14!130;UBERON:0000925!1.73e-14!130;UBERON:0006595!1.73e-14!130;UBERON:0001007!6.52e-14!128;UBERON:0001555!6.52e-14!128;UBERON:0007026!6.52e-14!128;UBERON:0004921!6.20e-13!126;UBERON:0004185!6.20e-13!126;UBERON:0000160!1.39e-10!43;UBERON:0000344!1.58e-10!15;UBERON:0004923!2.15e-09!24;UBERON:0001242!2.21e-09!13;UBERON:0000060!2.21e-09!13;UBERON:0001262!2.21e-09!13;UBERON:0004786!2.21e-09!13;UBERON:0005409!2.14e-08!59;UBERON:0005911!3.25e-08!69|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.26e-20,31;UBERON:0000344,2.18e-16,15;UBERON:0001242,3.03e-14,13;UBERON:0001262,3.03e-14,13;UBERON:0004786,3.03e-14,13;UBERON:0005409,7.15e-12,47;UBERON:0001007,2.25e-11,116;UBERON:0001555,2.25e-11,116;UBERON:0007026,2.25e-11,116;UBERON:0004119,5.61e-11,118;UBERON:0000925,5.61e-11,118;UBERON:0006595,5.61e-11,118;UBERON:0004921,3.98e-10,114;UBERON:0003350,7.63e-09,9;UBERON:0004808,7.63e-09,9;UBERON:0001277,7.63e-09,9;UBERON:0004923,1.07e-08,24;UBERON:0002048,5.03e-07,14;UBERON:0000117,5.03e-07,14;UBERON:0000171,5.03e-07,14;UBERON:0000170,5.03e-07,14;UBERON:0005597,5.03e-07,14;UBERON:0000118,5.03e-07,14;UBERON:0000485,6.48e-07,11|phase1_expression=0,2.79180326111489,2.72999543633722,0.90739263392049,3.50627010962443,1.6787927191189,3.27057696833736,1.54947988129892,0.140788722151667,0,0,0,1.02720437958723,0.699363219351979,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0,1.44573593256819,1.39007331681239,0.522399578277871,3.35984087866154,2.06468352960453,4.01962374880514,3.4460959692726,4.95583835177545,5.32065574477847,5.79669298447841,4.43461021310609,0,0,0,3.17736781726402,2.65975432573588,3.67504841272264,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,5.79728977403356,0.860423876981386,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,1.59857431606684,2.84831672011889,1.03909497345377,0.173485326766136,0,0.230615497256059,1.05505848386836,0.117588707135705,0.376999773989026,0.247194967734374,1.15679485535929,0.884610551949874,0,0,0,1.86391761218122,0,0.209446706813455,4.08731288333746,0.599075622529601,0,0.127070227073065,0.299581278809645,0,0,0.347648640384553,0,0.20778804455956,0.324482526135515,0.101839363850316,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.16455984991348,0.656669856316381,1.13496333364198,0.877199924551994,1.3173006917463,1.8788898626452,0,0,7.26921322564356,7.1401652999157,0.213288250535234,0,0,0,0,0.570676878337677,3.32170343081158,1.15289268306808,1.00534083520108,2.18852119245266,1.55971269695296,5.39291645192533,3.45820879799511,2.98711909881551,0,0.228497025219458,0,0.203651327845314,1.35766741017338,0.771494018793504,1.83385957660346,2.21415221969403,3.1399745568275,2.34454611451421,0.592905254174298,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,4.31304619582064,0.744281895337007,1.24815069245824,1.26289438973556,0.179397413521912,0.482443521363367,6.65111484599777,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,1.17254380209271,0.476087281772027,1.56106918286239,3.78324345854858,4.20782910332672,4.30527875375215,5.73521601505083,4.66249451037918,4.05017364028232,3.01582567878545,1.08781136763742,0.491764273019036,0,0.321101179975584,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,1.64970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,0,0.727067458955011,1.06949213515416,0.948110273807448,2.10837217149998,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0.847328283455281,0,0.49465875882444,0,0.120625849856312,0.238744688006273,0,1.45740418314925,0.370850604021019,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0.27338845544205,0,1.35982743995084,2.09927178485487,1.93479963326193,0,0,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.26175594198403,1.29614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0,0,0.288030006257865,0.632022241256357,1.62180172232131,0.924398614483445,1.03936658382236,0.358053391334963,0,0.240390899039938,0.443068581523732,0.403865799792591,0.533447646584999,0.604957110821043,0.38983152295901,0.481059208201647,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,1.31377732815827,5.67770035228522,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22035 | |||
|HGNC= | |||
|MCL_coexpression_id=3404 | |||
|TSSclassifier=NA | |||
|UniProt=P50592,Q3U5H0,Q3UQ13 | |||
|association_with_transcript=29bp_to_NM_009425,uc008otm.1,uc008otn.1_5end | |||
|cluster_id=chr3:27216028..27216039,+ | |||
|description=CAGE_peak_2_at_Tnfsf10_5end | |||
|id=chr3:27216028..27216039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.63e-09,9;CL:0002251,7.63e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.73e-14!130;UBERON:0000925!1.73e-14!130;UBERON:0006595!1.73e-14!130;UBERON:0001007!6.52e-14!128;UBERON:0001555!6.52e-14!128;UBERON:0007026!6.52e-14!128;UBERON:0004921!6.20e-13!126;UBERON:0004185!6.20e-13!126;UBERON:0000160!1.39e-10!43;UBERON:0000344!1.58e-10!15;UBERON:0004923!2.15e-09!24;UBERON:0001242!2.21e-09!13;UBERON:0000060!2.21e-09!13;UBERON:0001262!2.21e-09!13;UBERON:0004786!2.21e-09!13;UBERON:0005409!2.14e-08!59;UBERON:0005911!3.25e-08!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.26e-20,31;UBERON:0000344,2.18e-16,15;UBERON:0001242,3.03e-14,13;UBERON:0001262,3.03e-14,13;UBERON:0004786,3.03e-14,13;UBERON:0005409,7.15e-12,47;UBERON:0001007,2.25e-11,116;UBERON:0001555,2.25e-11,116;UBERON:0007026,2.25e-11,116;UBERON:0004119,5.61e-11,118;UBERON:0000925,5.61e-11,118;UBERON:0006595,5.61e-11,118;UBERON:0004921,3.98e-10,114;UBERON:0003350,7.63e-09,9;UBERON:0004808,7.63e-09,9;UBERON:0001277,7.63e-09,9;UBERON:0004923,1.07e-08,24;UBERON:0002048,5.03e-07,14;UBERON:0000117,5.03e-07,14;UBERON:0000171,5.03e-07,14;UBERON:0000170,5.03e-07,14;UBERON:0005597,5.03e-07,14;UBERON:0000118,5.03e-07,14;UBERON:0000485,6.48e-07,11 | |||
|phase1_expression=0,2.79180326111489,2.72999543633722,0.90739263392049,3.50627010962443,1.6787927191189,3.27057696833736,1.54947988129892,0.140788722151667,0,0,0,1.02720437958723,0.699363219351979,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0,1.44573593256819,1.39007331681239,0.522399578277871,3.35984087866154,2.06468352960453,4.01962374880514,3.4460959692726,4.95583835177545,5.32065574477847,5.79669298447841,4.43461021310609,0,0,0,3.17736781726402,2.65975432573588,3.67504841272264,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,5.79728977403356,0.860423876981386,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,1.59857431606684,2.84831672011889,1.03909497345377,0.173485326766136,0,0.230615497256059,1.05505848386836,0.117588707135705,0.376999773989026,0.247194967734374,1.15679485535929,0.884610551949874,0,0,0,1.86391761218122,0,0.209446706813455,4.08731288333746,0.599075622529601,0,0.127070227073065,0.299581278809645,0,0,0.347648640384553,0,0.20778804455956,0.324482526135515,0.101839363850316,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.16455984991348,0.656669856316381,1.13496333364198,0.877199924551994,1.3173006917463,1.8788898626452,0,0,7.26921322564356,7.1401652999157,0.213288250535234,0,0,0,0,0.570676878337677,3.32170343081158,1.15289268306808,1.00534083520108,2.18852119245266,1.55971269695296,5.39291645192533,3.45820879799511,2.98711909881551,0,0.228497025219458,0,0.203651327845314,1.35766741017338,0.771494018793504,1.83385957660346,2.21415221969403,3.1399745568275,2.34454611451421,0.592905254174298,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,4.31304619582064,0.744281895337007,1.24815069245824,1.26289438973556,0.179397413521912,0.482443521363367,6.65111484599777,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,1.17254380209271,0.476087281772027,1.56106918286239,3.78324345854858,4.20782910332672,4.30527875375215,5.73521601505083,4.66249451037918,4.05017364028232,3.01582567878545,1.08781136763742,0.491764273019036,0,0.321101179975584,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,1.64970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,0,0.727067458955011,1.06949213515416,0.948110273807448,2.10837217149998,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0.847328283455281,0,0.49465875882444,0,0.120625849856312,0.238744688006273,0,1.45740418314925,0.370850604021019,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0.27338845544205,0,1.35982743995084,2.09927178485487,1.93479963326193,0,0,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.26175594198403,1.29614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0,0,0.288030006257865,0.632022241256357,1.62180172232131,0.924398614483445,1.03936658382236,0.358053391334963,0,0.240390899039938,0.443068581523732,0.403865799792591,0.533447646584999,0.604957110821043,0.38983152295901,0.481059208201647,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,1.31377732815827,5.67770035228522,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0,0.824171801606613,0,0,0,0,0.581385666529314,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.385813221962283,0,0.701794825336225,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Tnfsf10 | |||
}} |
Latest revision as of 21:55, 1 October 2015
Short description: | p2@Tnfsf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tnfsf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:3404 |
Association with transcript: | 29bp_to_NM_009425, uc008otm.1, uc008otn.1_5end |
EntrezGene: | Tnfsf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.63e-09 | 9 |
epithelial cell of alimentary canal | 7.63e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.26e-20 | 31 |
mucosa | 2.18e-16 | 15 |
intestinal mucosa | 3.03e-14 | 13 |
wall of intestine | 3.03e-14 | 13 |
gastrointestinal system mucosa | 3.03e-14 | 13 |
gastrointestinal system | 7.15e-12 | 47 |
digestive system | 2.25e-11 | 116 |
digestive tract | 2.25e-11 | 116 |
primitive gut | 2.25e-11 | 116 |
endoderm-derived structure | 5.61e-11 | 118 |
endoderm | 5.61e-11 | 118 |
presumptive endoderm | 5.61e-11 | 118 |
subdivision of digestive tract | 3.98e-10 | 114 |
epithelium of mucosa | 7.63e-09 | 9 |
gastrointestinal system epithelium | 7.63e-09 | 9 |
intestinal epithelium | 7.63e-09 | 9 |
organ component layer | 1.07e-08 | 24 |
lung | 5.03e-07 | 14 |
respiratory tube | 5.03e-07 | 14 |
respiration organ | 5.03e-07 | 14 |
pair of lungs | 5.03e-07 | 14 |
lung primordium | 5.03e-07 | 14 |
lung bud | 5.03e-07 | 14 |
simple columnar epithelium | 6.48e-07 | 11 |