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FFCP PHASE1:Mm9::chrX:48371085..48371100,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:48371085..48371100,-
|DHSsupport=NA
|short_description=p5@Rap2c
|DPIdataset=NA
|description=CAGE_peak_5_at_Rap2c_5end
|association_with_transcript=94bp_to_ENSMUST00000053593,NM_172413,uc009tds.1_5end
|EntrezGene=72065
|EntrezGene=72065
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q8BU31,A2AD86,Q80ZJ1
|UniProt=Q8BU31,A2AD86,Q80ZJ1
|association_with_transcript=94bp_to_ENSMUST00000053593,NM_172413,uc009tds.1_5end
|cluster_id=chrX:48371085..48371100,-
|description=CAGE_peak_5_at_Rap2c_5end
|id=chrX:48371085..48371100,-
|ontology_enrichment_celltype=CL:0000791!1.53e-07!9;CL:0000789!1.53e-07!9;CL:0002420!1.53e-07!9;CL:0002419!1.53e-07!9;CL:0000790!1.53e-07!9;CL:0000542!1.59e-07!13;CL:0000051!1.59e-07!13;CL:0000838!2.23e-07!12;CL:0000624!8.49e-07!8;CL:0000084!9.39e-07!11;CL:0000827!9.39e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000791,6.26e-21,9;CL:0000789,6.26e-21,9;CL:0002420,6.26e-21,9;CL:0002419,6.26e-21,9;CL:0000790,6.26e-21,9;CL:0000838,8.97e-19,12;CL:0000624,1.56e-18,8;CL:0000542,3.67e-17,13;CL:0000051,3.67e-17,13;CL:0000084,8.68e-17,11;CL:0000827,8.68e-17,11;CL:0000893,2.57e-14,6;CL:0002489,2.57e-14,6;CL:0000898,2.57e-14,6;CL:0000809,2.57e-14,6;CL:0000810,2.57e-14,6;CL:0000895,2.57e-14,6;CL:0000808,2.57e-14,6;CL:0000894,2.57e-14,6;CL:0000806,2.57e-14,6;CL:0000807,2.57e-14,6;CL:0000805,2.57e-14,6;CL:0002425,2.57e-14,6;CL:0002436,2.57e-14,6;CL:0002427,2.57e-14,6;CL:0002428,2.57e-14,6;CL:0002429,2.57e-14,6;CL:0002433,2.57e-14,6;CL:0002431,2.57e-14,6;CL:0002432,2.57e-14,6;CL:0000738,1.29e-12,17;CL:0002087,1.29e-12,17;CL:0002031,2.89e-11,25;CL:0000988,3.16e-08,32;CL:0002032,3.16e-08,32;CL:0000037,3.16e-08,32;CL:0000837,3.16e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!5.46e-08!23;UBERON:0000974!5.46e-08!23;UBERON:0004807!5.46e-08!23;UBERON:0005058!5.46e-08!23;UBERON:0003351!5.46e-08!23;UBERON:0009113!5.46e-08!23;UBERON:0003295!5.46e-08!23;UBERON:0009722!5.46e-08!23;UBERON:0005562!5.46e-08!23;UBERON:0007690!5.46e-08!23;UBERON:0006562!6.39e-08!24;UBERON:0001557!6.39e-08!24;UBERON:0001042!6.39e-08!24;UBERON:0008814!6.39e-08!24;UBERON:0009145!6.39e-08!24;UBERON:0003408!3.02e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.02e-19,23;UBERON:0000974,1.02e-19,23;UBERON:0004807,1.02e-19,23;UBERON:0005058,1.02e-19,23;UBERON:0003351,1.02e-19,23;UBERON:0009113,1.02e-19,23;UBERON:0003295,1.02e-19,23;UBERON:0009722,1.02e-19,23;UBERON:0005562,1.02e-19,23;UBERON:0007690,1.02e-19,23;UBERON:0006562,9.55e-19,24;UBERON:0003408,9.55e-19,24;UBERON:0001557,9.55e-19,24;UBERON:0001042,9.55e-19,24;UBERON:0008814,9.55e-19,24;UBERON:0009145,9.55e-19,24;UBERON:0000072,2.90e-16,27;UBERON:0004177,6.76e-15,29;UBERON:0005057,6.76e-15,29;UBERON:0000077,9.72e-12,35;UBERON:0002193,1.69e-11,48;UBERON:0002405,1.69e-11,48;UBERON:0007811,2.57e-11,36;UBERON:0002390,5.80e-11,45;UBERON:0003061,5.80e-11,45;UBERON:0000153,2.64e-10,43;UBERON:0000065,1.62e-09,41;UBERON:0001004,3.29e-09,42;UBERON:0000490,2.78e-08,66;UBERON:0003929,2.94e-08,55
|phase1_expression=0,1.74487703819681,0.909998478779072,0.30246421130683,1.00179145989269,0.671517087647559,0.233612640595526,2.1950964985068,10.6999428835267,10.7669682108117,4.62288514208863,3.19088635981346,1.54080656938085,1.04904482902797,0,0.404950534779652,0.699561878128147,0.473193248037357,1.09691546884591,1.69755860719212,0.0850432901510698,0.992909512008853,0,0.799962113967033,2.2940928106717,3.44539178469012,0.430761996159075,2.15471232685889,1.14014051673824,0.252030129759931,1.33038306393183,0,0,0,0,0.166234645358492,0.204169356262369,4.60384793810598,0,1.57057123192139,1.76469446409304,1.36609096991689,2.91306211818692,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,2.18117387875057,2.90144856804538,5.04140698713696,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0.741584903203122,0.433798070759735,0,0.485300549842228,0,0,0,0,0,0,0.718890747035522,0,0.508280908292259,0.449371918214468,0,0,0,0.255715457330331,0,0.162241263067758,0.407357455401265,0.248813941220186,0.252722758433675,0.631325567659422,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.281105173679186,0,0.215567992932842,0.189106080167819,1.93546236580344,0.657587197282725,0.834141747676794,0,0.823128545631774,0.398068533636986,0.702213187313235,0.772043721344145,0.568326998791185,0.207125772535502,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.162137619091711,0,0,0,0.210289948564127,0,0.330418782983798,0,0.426576501070468,0.696710015581316,0.38660238396628,0,0.22237804384487,0,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,0.585400943573396,0.315270288212382,0,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0.354680467284547,0.535106452806212,0.164549020602121,0,0.704015124191131,0.42366414172764,0,0.65954501176592,0.484393280087717,0.904693873922338,2.02932984805332,1.47726809770555,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,3.73952545986482,3.07893195112048,3.04039942369732,0,0,0,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.39061315453185,0.419437377702843,0,0,1.58005560314089,0.810900861160657,0.308132871494482,0,0.537080087002444,0.596044064343795,1.44234539423963,2.80610101631697,1.81739609906666,1.67654974641,2.01652370273681,2.33898913775406,2.79014340756955,2.22066114144981,0.226730383615211,0.443971906748129,0.179427713218951,0,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.170733605754134,1.21553358534147,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264
|phase1_expression=0,1.74487703819681,0.909998478779072,0.30246421130683,1.00179145989269,0.671517087647559,0.233612640595526,2.1950964985068,10.6999428835267,10.7669682108117,4.62288514208863,3.19088635981346,1.54080656938085,1.04904482902797,0,0.404950534779652,0.699561878128147,0.473193248037357,1.09691546884591,1.69755860719212,0.0850432901510698,0.992909512008853,0,0.799962113967033,2.2940928106717,3.44539178469012,0.430761996159075,2.15471232685889,1.14014051673824,0.252030129759931,1.33038306393183,0,0,0,0,0.166234645358492,0.204169356262369,4.60384793810598,0,1.57057123192139,1.76469446409304,1.36609096991689,2.91306211818692,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,2.18117387875057,2.90144856804538,5.04140698713696,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0.741584903203122,0.433798070759735,0,0.485300549842228,0,0,0,0,0,0,0.718890747035522,0,0.508280908292259,0.449371918214468,0,0,0,0.255715457330331,0,0.162241263067758,0.407357455401265,0.248813941220186,0.252722758433675,0.631325567659422,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.281105173679186,0,0.215567992932842,0.189106080167819,1.93546236580344,0.657587197282725,0.834141747676794,0,0.823128545631774,0.398068533636986,0.702213187313235,0.772043721344145,0.568326998791185,0.207125772535502,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.162137619091711,0,0,0,0.210289948564127,0,0.330418782983798,0,0.426576501070468,0.696710015581316,0.38660238396628,0,0.22237804384487,0,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,0.585400943573396,0.315270288212382,0,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0.354680467284547,0.535106452806212,0.164549020602121,0,0.704015124191131,0.42366414172764,0,0.65954501176592,0.484393280087717,0.904693873922338,2.02932984805332,1.47726809770555,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,3.73952545986482,3.07893195112048,3.04039942369732,0,0,0,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.39061315453185,0.419437377702843,0,0,1.58005560314089,0.810900861160657,0.308132871494482,0,0.537080087002444,0.596044064343795,1.44234539423963,2.80610101631697,1.81739609906666,1.67654974641,2.01652370273681,2.33898913775406,2.79014340756955,2.22066114144981,0.226730383615211,0.443971906748129,0.179427713218951,0,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.170733605754134,1.21553358534147,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p5@Rap2c
}}
}}

Latest revision as of 21:23, 1 October 2015

Short description:p5@Rap2c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rap2c_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 94bp_to_ENSMUST00000053593, NM_172413, uc009tds.1_5end
EntrezGene:Rap2c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Rap2c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell6.26e-219
alpha-beta T cell6.26e-219
immature T cell6.26e-219
mature T cell6.26e-219
immature alpha-beta T cell6.26e-219
lymphoid lineage restricted progenitor cell8.97e-1912
CD4-positive, alpha-beta T cell1.56e-188
lymphocyte3.67e-1713
common lymphoid progenitor3.67e-1713
T cell8.68e-1711
pro-T cell8.68e-1711
thymocyte2.57e-146
double negative thymocyte2.57e-146
naive T cell2.57e-146
double-positive, alpha-beta thymocyte2.57e-146
CD4-positive, alpha-beta thymocyte2.57e-146
naive thymus-derived CD4-positive, alpha-beta T cell2.57e-146
DN4 thymocyte2.57e-146
DN1 thymic pro-T cell2.57e-146
DN2 thymocyte2.57e-146
DN3 thymocyte2.57e-146
immature single positive thymocyte2.57e-146
early T lineage precursor2.57e-146
mature CD4 single-positive thymocyte2.57e-146
resting double-positive thymocyte2.57e-146
double-positive blast2.57e-146
CD69-positive double-positive thymocyte2.57e-146
CD69-positive, CD4-positive single-positive thymocyte2.57e-146
CD4-positive, CD8-intermediate double-positive thymocyte2.57e-146
CD24-positive, CD4 single-positive thymocyte2.57e-146
leukocyte1.29e-1217
nongranular leukocyte1.29e-1217
hematopoietic lineage restricted progenitor cell2.89e-1125
hematopoietic cell3.16e-0832
hematopoietic oligopotent progenitor cell3.16e-0832
hematopoietic stem cell3.16e-0832
hematopoietic multipotent progenitor cell3.16e-0832

Uber anatomy
Ontology termp-valuen
thymus1.02e-1923
neck1.02e-1923
respiratory system epithelium1.02e-1923
hemolymphoid system gland1.02e-1923
pharyngeal epithelium1.02e-1923
thymic region1.02e-1923
pharyngeal gland1.02e-1923
entire pharyngeal arch endoderm1.02e-1923
thymus primordium1.02e-1923
early pharyngeal endoderm1.02e-1923
pharynx9.55e-1924
gland of gut9.55e-1924
upper respiratory tract9.55e-1924
chordate pharynx9.55e-1924
pharyngeal arch system9.55e-1924
pharyngeal region of foregut9.55e-1924
segment of respiratory tract2.90e-1627
hemopoietic organ6.76e-1529
immune organ6.76e-1529
mixed endoderm/mesoderm-derived structure9.72e-1235
hemolymphoid system1.69e-1148
immune system1.69e-1148
craniocervical region2.57e-1136
hematopoietic system5.80e-1145
blood island5.80e-1145
anterior region of body2.64e-1043
respiratory tract1.62e-0941
respiratory system3.29e-0942
unilaminar epithelium2.78e-0866
gut epithelium2.94e-0855
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