FFCP PHASE1:Mm9::chr11:6130177..6130245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237636 | |EntrezGene=237636 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=A3KMG9,Q6T3U4 | |UniProt=A3KMG9,Q6T3U4 | ||
|association_with_transcript=2bp_to_NM_207242,uc007hyb.2_5end | |association_with_transcript=2bp_to_NM_207242,uc007hyb.2_5end | ||
|cluster_id=chr11:6130177..6130245,- | |||
|description=CAGE_peak_1_at_Npc1l1_5end | |description=CAGE_peak_1_at_Npc1l1_5end | ||
|id=chr11:6130177..6130245,- | |id=chr11:6130177..6130245,- | ||
|ontology_enrichment_celltype=CL:0002563!5.68e-09!9;CL:0002251!5.68e-09!9;CL:0000239!2.74e-07!6;CL:0000677!2.74e-07!6;CL:0000212!2.74e-07!6;CL:0000584!2.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.43e-10,9;CL:0002251,1.43e-10,9;CL:0000239,1.58e-08,6;CL:0000677,1.58e-08,6;CL:0000584,1.58e-08,6;CL:0000075,3.95e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.60e-26!59;UBERON:0000160!6.81e-26!43;UBERON:0000344!5.60e-15!15;UBERON:0001242!4.62e-13!13;UBERON:0000060!4.62e-13!13;UBERON:0001262!4.62e-13!13;UBERON:0004786!4.62e-13!13;UBERON:0004923!1.50e-11!24;UBERON:0004119!2.05e-09!130;UBERON:0000925!2.05e-09!130;UBERON:0006595!2.05e-09!130;UBERON:0003350!5.68e-09!9;UBERON:0004808!5.68e-09!9;UBERON:0001277!5.68e-09!9;UBERON:0001007!8.97e-09!128;UBERON:0001555!8.97e-09!128;UBERON:0007026!8.97e-09!128;UBERON:0004921!9.05e-08!126;UBERON:0004185!9.05e-08!126;UBERON:0000485!7.30e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.32e-32,31;UBERON:0005409,9.61e-28,47;UBERON:0000344,7.15e-18,15;UBERON:0001242,1.54e-15,13;UBERON:0001262,1.54e-15,13;UBERON:0004786,1.54e-15,13;UBERON:0004923,8.43e-12,24;UBERON:0003350,1.43e-10,9;UBERON:0004808,1.43e-10,9;UBERON:0001277,1.43e-10,9;UBERON:0000485,3.09e-08,11 | |||
|phase1_expression=0,364.330325575493,344.434424217879,509.349731840702,500.895729946347,54.3928840994523,71.2518553816353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243.348475068772,277.814639372343,246.345512605344,176.612418425221,212.023692962915,449.595410433781,549.677713006409,149.668094692331,0,0,0,6.93243887403059,20.94556531517,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4204400438471,0,0,0,0,0,0,0,0,0,0,101.966204589121,0,0,0,0,0.230615497256059,0,0,0.879666139307728,6.67426412882809,0,0,0,0,0,13.0474232852686,0,0,805.711552127897,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1328.94434516084,566.453113793312,0.213288250535234,0.232236671860439,5.28356591420583,93.3794719006076,176.568166812827,206.204578706014,648.206698069803,273.729662751306,308.13696598913,320.717832930335,307.653329473972,721.75198514934,780.474498097521,562.773238216842,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,0.589676985339609,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0,0,0,0,0,0.505157755894224,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,1.209294227859,0.377210159511796,0,0.307435147943927,33.0788215255323,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.48282449604674,0,0,0,0,0,0,566.05578473517,0,0,0,0.370389054739423,0,0,0,0,0,0,9.54670618015114,0,0.203319467126849,6.37231510848627,4.18176592028937,15.5037420259786,3.50647300600534,7.02554373665355,8.11443420150492,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,2.02227859295016,12.2235700290888,9.68364769022803,11.2321723357135,12.8875577999537,11.4065684950608,11.1289541417785,9.36415074698824,10.6281752992083,11.0850455084334,11.9073422820768,10.7772423128716,11.1887347868949,10.714233420886,10.1567254892734,12.343293085875,9.58369353260422,9.77588378784016,14.3892952466005,10.0697037044404,11.8460451048347,11.5244622909847,10.7858581689516,10.7285249938231,9.53941861818155,9.01626137743724,7.68334962529395,11.0492381655816,12.8597578184352,7.71626443924566,0,11.9305120307158,19.7681369724434,0,0,0 | |phase1_expression=0,364.330325575493,344.434424217879,509.349731840702,500.895729946347,54.3928840994523,71.2518553816353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,243.348475068772,277.814639372343,246.345512605344,176.612418425221,212.023692962915,449.595410433781,549.677713006409,149.668094692331,0,0,0,6.93243887403059,20.94556531517,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4204400438471,0,0,0,0,0,0,0,0,0,0,101.966204589121,0,0,0,0,0.230615497256059,0,0,0.879666139307728,6.67426412882809,0,0,0,0,0,13.0474232852686,0,0,805.711552127897,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1328.94434516084,566.453113793312,0.213288250535234,0.232236671860439,5.28356591420583,93.3794719006076,176.568166812827,206.204578706014,648.206698069803,273.729662751306,308.13696598913,320.717832930335,307.653329473972,721.75198514934,780.474498097521,562.773238216842,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,0.589676985339609,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0,0,0,0,0,0.505157755894224,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,1.209294227859,0.377210159511796,0,0.307435147943927,33.0788215255323,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.48282449604674,0,0,0,0,0,0,566.05578473517,0,0,0,0.370389054739423,0,0,0,0,0,0,9.54670618015114,0,0.203319467126849,6.37231510848627,4.18176592028937,15.5037420259786,3.50647300600534,7.02554373665355,8.11443420150492,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,2.02227859295016,12.2235700290888,9.68364769022803,11.2321723357135,12.8875577999537,11.4065684950608,11.1289541417785,9.36415074698824,10.6281752992083,11.0850455084334,11.9073422820768,10.7772423128716,11.1887347868949,10.714233420886,10.1567254892734,12.343293085875,9.58369353260422,9.77588378784016,14.3892952466005,10.0697037044404,11.8460451048347,11.5244622909847,10.7858581689516,10.7285249938231,9.53941861818155,9.01626137743724,7.68334962529395,11.0492381655816,12.8597578184352,7.71626443924566,0,11.9305120307158,19.7681369724434,0,0,0 | ||
|short_description=p1@Npc1l1 | |short_description=p1@Npc1l1 | ||
}} | }} |
Latest revision as of 20:35, 1 October 2015
Short description: | p1@Npc1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Npc1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 2bp_to_NM_207242, uc007hyb.2_5end |
EntrezGene: | Npc1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.43e-10 | 9 |
epithelial cell of alimentary canal | 1.43e-10 | 9 |
brush border epithelial cell | 1.58e-08 | 6 |
gut absorptive cell | 1.58e-08 | 6 |
enterocyte | 1.58e-08 | 6 |
columnar/cuboidal epithelial cell | 3.95e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.32e-32 | 31 |
gastrointestinal system | 9.61e-28 | 47 |
mucosa | 7.15e-18 | 15 |
intestinal mucosa | 1.54e-15 | 13 |
wall of intestine | 1.54e-15 | 13 |
gastrointestinal system mucosa | 1.54e-15 | 13 |
organ component layer | 8.43e-12 | 24 |
epithelium of mucosa | 1.43e-10 | 9 |
gastrointestinal system epithelium | 1.43e-10 | 9 |
intestinal epithelium | 1.43e-10 | 9 |
simple columnar epithelium | 3.09e-08 | 11 |