FFCP PHASE1:Mm9::chr6:85782233..85782257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68396 | |EntrezGene=68396 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIY7 | |UniProt=Q9JIY7 | ||
|association_with_transcript=-157bp_to_ENSMUST00000032073_5end | |association_with_transcript=-157bp_to_ENSMUST00000032073_5end | ||
|cluster_id=chr6:85782233..85782257,- | |||
|description=CAGE_peak_3_at_Nat8_5end | |description=CAGE_peak_3_at_Nat8_5end | ||
|id=chr6:85782233..85782257,- | |id=chr6:85782233..85782257,- | ||
|ontology_enrichment_celltype=CL:0000239!3.72e-09!6;CL:0000677!3.72e-09!6;CL:0000212!3.72e-09!6;CL:0000584!3.72e-09!6;CL:0000075!1.06e-07!7;CL:0002563!2.13e-07!9;CL:0002251!2.13e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.74e-12,3;CL:0000239,3.29e-09,6;CL:0000677,3.29e-09,6;CL:0000584,3.29e-09,6;CL:0000075,6.67e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.80e-20!43;UBERON:0000344!1.45e-15!15;UBERON:0005409!6.31e-14!59;UBERON:0001242!6.83e-13!13;UBERON:0000060!6.83e-13!13;UBERON:0001262!6.83e-13!13;UBERON:0004786!6.83e-13!13;UBERON:0004923!2.19e-08!24;UBERON:0003350!2.13e-07!9;UBERON:0004808!2.13e-07!9;UBERON:0001277!2.13e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-39,31;UBERON:0005409,8.45e-25,47;UBERON:0000344,5.91e-21,15;UBERON:0001242,8.52e-16,13;UBERON:0001262,8.52e-16,13;UBERON:0004786,8.52e-16,13;UBERON:0002108,1.15e-13,4;UBERON:0004923,1.96e-12,24;UBERON:0000331,6.93e-11,3;UBERON:0002116,6.93e-11,3;UBERON:0001204,6.93e-11,3;UBERON:0001168,6.93e-11,3;UBERON:0001007,7.31e-10,116;UBERON:0001555,7.31e-10,116;UBERON:0007026,7.31e-10,116;UBERON:0004119,1.27e-09,118;UBERON:0000925,1.27e-09,118;UBERON:0006595,1.27e-09,118;UBERON:0004921,6.43e-08,114;UBERON:0001962,1.96e-07,2;UBERON:0001961,1.96e-07,2;UBERON:0001744,1.96e-07,2 | |||
|phase1_expression=0,6.97950815278722,3.63999391511629,3.0246421130683,3.00537437967808,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,2.55987876469451,3.89995777814189,11.4846392823004,5.59990595006797,6.46413698057667,5.89072600314759,6.04872311423834,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,2.64450566663544,0,0,0.257734922644187,0.403367049246685,1.55664630691409,3.80451252225118,0.949058123089023,3.95277491337626,4.52403375840485,4.57599885694647,4.28920991662064,3.59527763461689,3.45820879799511,2.38969527905241,0,0,0,0.610953983535943,0.775809948670503,0.701358198903186,0,0,0.627994911365499,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.476872379894642,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,6.97950815278722,3.63999391511629,3.0246421130683,3.00537437967808,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,2.55987876469451,3.89995777814189,11.4846392823004,5.59990595006797,6.46413698057667,5.89072600314759,6.04872311423834,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,2.64450566663544,0,0,0.257734922644187,0.403367049246685,1.55664630691409,3.80451252225118,0.949058123089023,3.95277491337626,4.52403375840485,4.57599885694647,4.28920991662064,3.59527763461689,3.45820879799511,2.38969527905241,0,0,0,0.610953983535943,0.775809948670503,0.701358198903186,0,0,0.627994911365499,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.476872379894642,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p3@Nat8 | |short_description=p3@Nat8 | ||
}} | }} |
Latest revision as of 20:03, 1 October 2015
Short description: | p3@Nat8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nat8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -157bp_to_ENSMUST00000032073_5end |
EntrezGene: | Nat8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.74e-12 | 3 |
brush border epithelial cell | 3.29e-09 | 6 |
gut absorptive cell | 3.29e-09 | 6 |
enterocyte | 3.29e-09 | 6 |
columnar/cuboidal epithelial cell | 6.67e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-39 | 31 |
gastrointestinal system | 8.45e-25 | 47 |
mucosa | 5.91e-21 | 15 |
intestinal mucosa | 8.52e-16 | 13 |
wall of intestine | 8.52e-16 | 13 |
gastrointestinal system mucosa | 8.52e-16 | 13 |
small intestine | 1.15e-13 | 4 |
organ component layer | 1.96e-12 | 24 |
ileal mucosa | 6.93e-11 | 3 |
ileum | 6.93e-11 | 3 |
mucosa of small intestine | 6.93e-11 | 3 |
wall of small intestine | 6.93e-11 | 3 |
digestive system | 7.31e-10 | 116 |
digestive tract | 7.31e-10 | 116 |
primitive gut | 7.31e-10 | 116 |
endoderm-derived structure | 1.27e-09 | 118 |
endoderm | 1.27e-09 | 118 |
presumptive endoderm | 1.27e-09 | 118 |
subdivision of digestive tract | 6.43e-08 | 114 |
gut-associated lymphoid tissue | 1.96e-07 | 2 |
mucosa-associated lymphoid tissue | 1.96e-07 | 2 |
lymphoid tissue | 1.96e-07 | 2 |