FFCP PHASE1:Mm9::chr6:85782213..85782226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68396 | |EntrezGene=68396 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JIY7 | |UniProt=Q9JIY7 | ||
|association_with_transcript=-137bp_to_ENSMUST00000032073_5end | |association_with_transcript=-137bp_to_ENSMUST00000032073_5end | ||
|cluster_id=chr6:85782213..85782226,- | |||
|description=CAGE_peak_2_at_Nat8_5end | |description=CAGE_peak_2_at_Nat8_5end | ||
|id=chr6:85782213..85782226,- | |id=chr6:85782213..85782226,- | ||
|ontology_enrichment_celltype=CL:0000239!8.59e-12!6;CL:0000677!8.59e-12!6;CL:0000212!8.59e-12!6;CL:0000584!8.59e-12!6;CL:0000075!5.71e-10!7;CL:0002563!6.48e-10!9;CL:0002251!6.48e-10!9;CL:0000473!3.31e-07!3;CL:0000627!3.31e-07!3;CL:0000682!3.31e-07!3 | |ontology_enrichment_celltype=CL:0000239!8.59e-12!6;CL:0000677!8.59e-12!6;CL:0000212!8.59e-12!6;CL:0000584!8.59e-12!6;CL:0000075!5.71e-10!7;CL:0002563!6.48e-10!9;CL:0002251!6.48e-10!9;CL:0000473!3.31e-07!3;CL:0000627!3.31e-07!3;CL:0000682!3.31e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.42e-20,6;CL:0000677,8.42e-20,6;CL:0000584,8.42e-20,6;CL:0000075,6.75e-17,7;CL:0002563,5.09e-13,9;CL:0002251,5.09e-13,9;CL:0000682,1.24e-11,3;CL:0000066,8.70e-10,25;CL:0002076,1.41e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.59e-22!43;UBERON:0000344!8.27e-20!15;UBERON:0005409!2.68e-18!59;UBERON:0001242!2.15e-16!13;UBERON:0000060!2.15e-16!13;UBERON:0001262!2.15e-16!13;UBERON:0004786!2.15e-16!13;UBERON:0004923!4.35e-11!24;UBERON:0003350!6.48e-10!9;UBERON:0004808!6.48e-10!9;UBERON:0001277!6.48e-10!9;UBERON:0000485!7.05e-08!11 | |ontology_enrichment_uberon=UBERON:0000160!2.59e-22!43;UBERON:0000344!8.27e-20!15;UBERON:0005409!2.68e-18!59;UBERON:0001242!2.15e-16!13;UBERON:0000060!2.15e-16!13;UBERON:0001262!2.15e-16!13;UBERON:0004786!2.15e-16!13;UBERON:0004923!4.35e-11!24;UBERON:0003350!6.48e-10!9;UBERON:0004808!6.48e-10!9;UBERON:0001277!6.48e-10!9;UBERON:0000485!7.05e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-39,31;UBERON:0000344,1.24e-25,15;UBERON:0005409,9.62e-25,47;UBERON:0001242,6.34e-20,13;UBERON:0001262,6.34e-20,13;UBERON:0004786,6.34e-20,13;UBERON:0004923,2.96e-15,24;UBERON:0003350,5.09e-13,9;UBERON:0004808,5.09e-13,9;UBERON:0001277,5.09e-13,9;UBERON:0000485,1.51e-10,11;UBERON:0001007,6.72e-10,116;UBERON:0001555,6.72e-10,116;UBERON:0007026,6.72e-10,116;UBERON:0004119,1.17e-09,118;UBERON:0000925,1.17e-09,118;UBERON:0006595,1.17e-09,118;UBERON:0002108,4.23e-08,4;UBERON:0004921,6.75e-08,114;UBERON:0001962,9.13e-08,2;UBERON:0001961,9.13e-08,2;UBERON:0001744,9.13e-08,2 | |||
|phase1_expression=0,12.563114675017,8.64498554840118,4.53696316960245,4.00716583957078,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.7997726838022,4.35877634027623,8.03924749761028,10.7690499039769,6.67960821326256,6.84084310042946,3.78045194639896,0.665191531965914,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,4.7601101999438,0,0,0,0.80673409849337,0.889512175379481,2.66315876557583,5.21981967698963,4.11747386810027,2.5133520880027,2.78539060857611,0.779856348476481,4.49409704327111,1.72910439899755,4.77939055810481,0,0,0,0,0.581857461502877,0.771494018793504,0,0,0.470996183524124,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0.532427418478012,0.715308569841963,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,12.563114675017,8.64498554840118,4.53696316960245,4.00716583957078,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.7997726838022,4.35877634027623,8.03924749761028,10.7690499039769,6.67960821326256,6.84084310042946,3.78045194639896,0.665191531965914,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,4.7601101999438,0,0,0,0.80673409849337,0.889512175379481,2.66315876557583,5.21981967698963,4.11747386810027,2.5133520880027,2.78539060857611,0.779856348476481,4.49409704327111,1.72910439899755,4.77939055810481,0,0,0,0,0.581857461502877,0.771494018793504,0,0,0.470996183524124,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0.532427418478012,0.715308569841963,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p2@Nat8 | |short_description=p2@Nat8 | ||
}} | }} |
Latest revision as of 20:03, 1 October 2015
Short description: | p2@Nat8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nat8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -137bp_to_ENSMUST00000032073_5end |
EntrezGene: | Nat8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.42e-20 | 6 |
gut absorptive cell | 8.42e-20 | 6 |
enterocyte | 8.42e-20 | 6 |
columnar/cuboidal epithelial cell | 6.75e-17 | 7 |
intestinal epithelial cell | 5.09e-13 | 9 |
epithelial cell of alimentary canal | 5.09e-13 | 9 |
M cell of gut | 1.24e-11 | 3 |
epithelial cell | 8.70e-10 | 25 |
endo-epithelial cell | 1.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.75e-39 | 31 |
mucosa | 1.24e-25 | 15 |
gastrointestinal system | 9.62e-25 | 47 |
intestinal mucosa | 6.34e-20 | 13 |
wall of intestine | 6.34e-20 | 13 |
gastrointestinal system mucosa | 6.34e-20 | 13 |
organ component layer | 2.96e-15 | 24 |
epithelium of mucosa | 5.09e-13 | 9 |
gastrointestinal system epithelium | 5.09e-13 | 9 |
intestinal epithelium | 5.09e-13 | 9 |
simple columnar epithelium | 1.51e-10 | 11 |
digestive system | 6.72e-10 | 116 |
digestive tract | 6.72e-10 | 116 |
primitive gut | 6.72e-10 | 116 |
endoderm-derived structure | 1.17e-09 | 118 |
endoderm | 1.17e-09 | 118 |
presumptive endoderm | 1.17e-09 | 118 |
small intestine | 4.23e-08 | 4 |
subdivision of digestive tract | 6.75e-08 | 114 |
gut-associated lymphoid tissue | 9.13e-08 | 2 |
mucosa-associated lymphoid tissue | 9.13e-08 | 2 |
lymphoid tissue | 9.13e-08 | 2 |