FFCP PHASE1:Mm9::chr13:55932739..55932756,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:55932739..55932756,-
|short_description=p5@Pitx1
|description=CAGE_peak_5_at_Pitx1_5end
|association_with_transcript=29bp_to_ENSMUST00000021968,NM_011097,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18740 | |EntrezGene=18740 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P70314,Q3UQH0 | |UniProt=P70314,Q3UQH0 | ||
|association_with_transcript=29bp_to_ENSMUST00000021968,NM_011097,uc007qsd.1_5end | |||
|cluster_id=chr13:55932739..55932756,- | |||
|description=CAGE_peak_5_at_Pitx1_5end | |||
|id=chr13:55932739..55932756,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.22e-08,9;CL:0002251,1.22e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.65e-14!59;UBERON:0000160!5.26e-11!43;UBERON:0000344!4.32e-09!15;UBERON:0001242!1.62e-08!13;UBERON:0000060!1.62e-08!13;UBERON:0001262!1.62e-08!13;UBERON:0004786!1.62e-08!13;UBERON:0000007!1.36e-07!8;UBERON:0003296!1.36e-07!8;UBERON:0010133!1.36e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.49e-31,47;UBERON:0000160,7.02e-23,31;UBERON:0004119,2.01e-12,118;UBERON:0000925,2.01e-12,118;UBERON:0006595,2.01e-12,118;UBERON:0004921,2.42e-12,114;UBERON:0001007,5.78e-12,116;UBERON:0001555,5.78e-12,116;UBERON:0007026,5.78e-12,116;UBERON:0001242,3.86e-11,13;UBERON:0001262,3.86e-11,13;UBERON:0004786,3.86e-11,13;UBERON:0000007,1.50e-10,8;UBERON:0003296,1.50e-10,8;UBERON:0010133,1.50e-10,8;UBERON:0000344,2.31e-09,15;UBERON:0000945,9.14e-09,16;UBERON:0010039,9.14e-09,16;UBERON:0003350,1.22e-08,9;UBERON:0004808,1.22e-08,9;UBERON:0001277,1.22e-08,9;UBERON:0011216,3.44e-08,194;UBERON:0001894,3.53e-08,10;UBERON:0006222,3.53e-08,10;UBERON:0000485,7.50e-07,11 | |||
|phase1_expression=0,1.04692622291808,0,1.81478526784098,0.500895729946347,2.35030980676646,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0.319984845586813,0.45881856213434,1.72269589234506,2.58457197695445,2.15471232685889,2.09025761402011,1.26015064879965,2.21730510655305,0,0,0,4.33277429626912,3.49092755252834,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,6.47635225796619,5.45550609666024,2.82671659608272,0,1.28326477414318,0,0,0,0.253359865475099,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,0.441683036920787,0.484875253135222,0,0,0,3.0654846625031,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0,0,0,0,0.945530400839096,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.3800550999719,0,0.232236671860439,1.80414445850931,0.80673409849337,1.55664630691409,2.47293313946327,2.37264530772256,1.81168850196412,2.26201687920243,1.79060824837036,2.33956904542944,2.69645822596266,1.51296634912286,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,10.2131881726136,0.540183282093931,1.68166288917581,2.35770738534752,2.6601035046341,2.49716344642899,2.63278432963394,3.04464949114599,0,1.0591603543191,0,0.49465875882444,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0.138199973804424,3.81868247206045,1.10717597753397,2.03319467126849,2.26811215725783,2.09088296014469,2.40198820120795,2.02296519577231,2.72756403893609,3.92633912976044,1.42576470620972,4.97071450469541,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,4.76133805591944,0,0,0.335769232728157,1.9318959403219,0,0,3.64426244434412,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.64183841918363,0,0.25347929989024,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.952587382566147,0,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0.470546902076653,0.592302255241736,0.182927972872773,0,0.543216455383447,0.561142271657738,0,0.788035859004508,0.818462086339379,0.464810523557898,1.35034627686799,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 | |phase1_expression=0,1.04692622291808,0,1.81478526784098,0.500895729946347,2.35030980676646,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0.319984845586813,0.45881856213434,1.72269589234506,2.58457197695445,2.15471232685889,2.09025761402011,1.26015064879965,2.21730510655305,0,0,0,4.33277429626912,3.49092755252834,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,6.47635225796619,5.45550609666024,2.82671659608272,0,1.28326477414318,0,0,0,0.253359865475099,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,0.441683036920787,0.484875253135222,0,0,0,3.0654846625031,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0,0,0,0,0.945530400839096,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.3800550999719,0,0.232236671860439,1.80414445850931,0.80673409849337,1.55664630691409,2.47293313946327,2.37264530772256,1.81168850196412,2.26201687920243,1.79060824837036,2.33956904542944,2.69645822596266,1.51296634912286,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,10.2131881726136,0.540183282093931,1.68166288917581,2.35770738534752,2.6601035046341,2.49716344642899,2.63278432963394,3.04464949114599,0,1.0591603543191,0,0.49465875882444,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0.138199973804424,3.81868247206045,1.10717597753397,2.03319467126849,2.26811215725783,2.09088296014469,2.40198820120795,2.02296519577231,2.72756403893609,3.92633912976044,1.42576470620972,4.97071450469541,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,4.76133805591944,0,0,0.335769232728157,1.9318959403219,0,0,3.64426244434412,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.64183841918363,0,0.25347929989024,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.952587382566147,0,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0.470546902076653,0.592302255241736,0.182927972872773,0,0.543216455383447,0.561142271657738,0,0.788035859004508,0.818462086339379,0.464810523557898,1.35034627686799,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p5@Pitx1 | |||
}} | }} |
Latest revision as of 18:59, 1 October 2015
Short description: | p5@Pitx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pitx1_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENSMUST00000021968, NM_011097, uc007qsd.1_5end |
EntrezGene: | Pitx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.22e-08 | 9 |
epithelial cell of alimentary canal | 1.22e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.49e-31 | 47 |
intestine | 7.02e-23 | 31 |
endoderm-derived structure | 2.01e-12 | 118 |
endoderm | 2.01e-12 | 118 |
presumptive endoderm | 2.01e-12 | 118 |
subdivision of digestive tract | 2.42e-12 | 114 |
digestive system | 5.78e-12 | 116 |
digestive tract | 5.78e-12 | 116 |
primitive gut | 5.78e-12 | 116 |
intestinal mucosa | 3.86e-11 | 13 |
wall of intestine | 3.86e-11 | 13 |
gastrointestinal system mucosa | 3.86e-11 | 13 |
pituitary gland | 1.50e-10 | 8 |
gland of diencephalon | 1.50e-10 | 8 |
neuroendocrine gland | 1.50e-10 | 8 |
mucosa | 2.31e-09 | 15 |
stomach | 9.14e-09 | 16 |
food storage organ | 9.14e-09 | 16 |
epithelium of mucosa | 1.22e-08 | 9 |
gastrointestinal system epithelium | 1.22e-08 | 9 |
intestinal epithelium | 1.22e-08 | 9 |
organ system subdivision | 3.44e-08 | 194 |
diencephalon | 3.53e-08 | 10 |
future diencephalon | 3.53e-08 | 10 |
simple columnar epithelium | 7.50e-07 | 11 |