FFCP PHASE1:Mm9::chr1:89470400..89470446,-: Difference between revisions
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{{FFCP|EntrezGene=53972|HGNC=|MCL_coexpression_id=166|UniProt=E9QK62,Q8CHT1|association_with_transcript=0bp_to_ENSMUST00000068681,NM_001111314,uc007bwy.2_5end|description=CAGE_peak_2_at_Ngef_5end|id=chr1:89470400..89470446,-|ontology_enrichment_celltype=CL:0002563!7.32e-07!9;CL:0002251!7.32e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-07,9;CL:0002251,1.17e-07,9;CL:0000066,3.88e-07,25;CL:0000223,5.85e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.80e-24!128;UBERON:0001555!3.80e-24!128;UBERON:0007026!3.80e-24!128;UBERON:0004119!9.84e-24!130;UBERON:0000925!9.84e-24!130;UBERON:0006595!9.84e-24!130;UBERON:0004921!5.58e-23!126;UBERON:0004185!5.58e-23!126;UBERON:0000160!9.73e-22!43;UBERON:0005409!3.36e-21!59;UBERON:0009854!9.24e-14!23;UBERON:0009856!9.24e-14!23;UBERON:0002107!4.37e-13!22;UBERON:0007499!4.37e-13!22;UBERON:0006925!4.37e-13!22;UBERON:0009497!4.37e-13!22;UBERON:0000015!4.37e-13!22;UBERON:0002423!4.37e-13!22;UBERON:0006235!4.37e-13!22;UBERON:0008835!4.37e-13!22;UBERON:0003894!4.37e-13!22;UBERON:0004161!4.37e-13!22;UBERON:0008836!4.37e-13!22;UBERON:0002365!6.36e-12!25;UBERON:0002330!6.36e-12!25;UBERON:0000344!2.94e-10!15;UBERON:0005177!1.02e-09!85;UBERON:0001242!2.75e-09!13;UBERON:0000060!2.75e-09!13;UBERON:0001262!2.75e-09!13;UBERON:0004786!2.75e-09!13;UBERON:0009569!5.68e-09!66;UBERON:0000466!1.18e-08!79;UBERON:0005172!3.76e-08!49;UBERON:0005173!3.76e-08!49;UBERON:0002417!3.76e-08!49;UBERON:0000916!3.76e-08!49;UBERON:0001041!1.11e-07!92;UBERON:0000077!2.56e-07!97;UBERON:0003350!7.32e-07!9;UBERON:0004808!7.32e-07!9;UBERON:0001277!7.32e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-22,31;UBERON:0001007,9.56e-19,116;UBERON:0001555,9.56e-19,116;UBERON:0007026,9.56e-19,116;UBERON:0005409,3.48e-18,47;UBERON:0004119,5.69e-18,118;UBERON:0000925,5.69e-18,118;UBERON:0006595,5.69e-18,118;UBERON:0004921,1.27e-17,114;UBERON:0009854,1.40e-15,23;UBERON:0009856,1.40e-15,23;UBERON:0002107,8.35e-15,22;UBERON:0007499,8.35e-15,22;UBERON:0006925,8.35e-15,22;UBERON:0009497,8.35e-15,22;UBERON:0000015,8.35e-15,22;UBERON:0002423,8.35e-15,22;UBERON:0006235,8.35e-15,22;UBERON:0008835,8.35e-15,22;UBERON:0003894,8.35e-15,22;UBERON:0004161,8.35e-15,22;UBERON:0008836,8.35e-15,22;UBERON:0002365,6.24e-13,25;UBERON:0002330,6.24e-13,25;UBERON:0000344,1.48e-11,15;UBERON:0001242,1.93e-10,13;UBERON:0001262,1.93e-10,13;UBERON:0004786,1.93e-10,13;UBERON:0003350,1.17e-07,9;UBERON:0004808,1.17e-07,9;UBERON:0001277,1.17e-07,9;UBERON:0005177,1.77e-07,79;UBERON:0003929,9.00e-07,55|phase1_expression=0,7.32848356042658,12.739978702907,38.1104906246606,44.5797199652249,7.55456723603504,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,9.91953021319121,10.3234176480227,5.16808767703518,7.75371593086335,6.46413698057667,26.0332084655232,18.146169342715,4.21287970245079,0,0,0,23.6858328196045,19.4494535069436,21.4377824075488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,11.3047150593654,4.30211938490693,14.9593693415705,34.5410042648203,14.9448576012964,30.4658283226188,7.3031098468511,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,0,11.3042040921869,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,1.73036477414062,0,0,0,0,0,20.5030937339934,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.248813941220186,0.758168275301024,0,0,0,0,0.452114453507145,0,0.12811372028485,0,0,0,0,0,0,0,0.696504333044333,4.11564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,37.0069036941854,12.6936271998501,0,1.16118335930219,10.6959992897337,20.3700359869576,16.4559752445204,16.9300807240178,18.0321043386914,20.9167672499494,24.1281800448259,29.6445143341315,25.1503672383665,28.7622210769351,25.7204279350886,22.5029638777435,0,0.342745537829186,0,0.814605311381257,2.52138233317913,1.68325967736765,6.0707075639287,12.251642282307,7.69293766422737,9.00799296629144,20.7516838961004,2.16898637430922,2.75182593158484,4.27238013531222,5.07150303471257,11.8176808278684,15.2775511068852,12.9463261852865,17.1863340381537,16.4736847912849,23.0029130443767,28.6548529704748,22.7787501373629,21.4692046255045,7.71408878144222,11.0962009913574,4.61882975416512,0,0.162964976442026,0.339490171550376,2.11221223459652,2.01007508930179,2.61848004974615,1.95133647857799,1.26108115284953,0.664394068946325,0.797273843287435,2.62181303545181,0.518054945597687,1.88043776155965,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55492153374884,1.42452482933804,0.81443479676788,2.63952196756057,0,4.12727081463468,5.74414758233027,6.03536255218874,6.496641643377,5.84126781093462,5.68542244970086,9.81541069589265,6.77345018930971,2.21225730555071,3.16255825724996,2.06271086496374,0,0,0,0,0,0,0,0.608929898229199,0.469343416127421,0,0,1.31909002353184,1.93757312035087,1.56813604813205,0.477489376012546,0.820704498725306,29.1480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.790839983952838,4.47302827679067,3.78018692876304,5.43629569637619,7.42432716737004,2.69728692769641,4.95920734352016,5.49687478166462,17.1091764745167,2.4853572523477,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,3.17422537061296,0,0,0,0.19318959403219,10.8855835761686,10.2564909589668,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,2.91728060481953,2.30574478890781,2.5738091183002,3.33370091702423,2.88449080134452,1.60459604795908,2.52697211763797,1.77435509923168,3.9611531691076,3.183811253976,3.00918216302886,3.15895079255873,2.85776214769844,2.20180219295225,3.08654752741928,2.47251540481984,2.06078488188156,4.4573002810104,2.30718548007139,2.38436189947321,3.19762116591123,2.35273451038327,2.70766745253365,3.10977553883713,4.20911538300549,2.58027816307137,2.80571135828869,3.08451047122853,2.46261205938909,3.27384834535751,2.63392630016142,2.70069255373598,0.249810577937946,3.04111090979031,2.79332370262788,0.382576664137687,0.220591419119515,0|short_description=p2@Ngef}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53972 | |||
|HGNC= | |||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=E9QK62,Q8CHT1 | |||
|association_with_transcript=0bp_to_ENSMUST00000068681,NM_001111314,uc007bwy.2_5end | |||
|cluster_id=chr1:89470400..89470446,- | |||
|description=CAGE_peak_2_at_Ngef_5end | |||
|id=chr1:89470400..89470446,- | |||
|ontology_enrichment_celltype=CL:0002563!7.32e-07!9;CL:0002251!7.32e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-07,9;CL:0002251,1.17e-07,9;CL:0000066,3.88e-07,25;CL:0000223,5.85e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.80e-24!128;UBERON:0001555!3.80e-24!128;UBERON:0007026!3.80e-24!128;UBERON:0004119!9.84e-24!130;UBERON:0000925!9.84e-24!130;UBERON:0006595!9.84e-24!130;UBERON:0004921!5.58e-23!126;UBERON:0004185!5.58e-23!126;UBERON:0000160!9.73e-22!43;UBERON:0005409!3.36e-21!59;UBERON:0009854!9.24e-14!23;UBERON:0009856!9.24e-14!23;UBERON:0002107!4.37e-13!22;UBERON:0007499!4.37e-13!22;UBERON:0006925!4.37e-13!22;UBERON:0009497!4.37e-13!22;UBERON:0000015!4.37e-13!22;UBERON:0002423!4.37e-13!22;UBERON:0006235!4.37e-13!22;UBERON:0008835!4.37e-13!22;UBERON:0003894!4.37e-13!22;UBERON:0004161!4.37e-13!22;UBERON:0008836!4.37e-13!22;UBERON:0002365!6.36e-12!25;UBERON:0002330!6.36e-12!25;UBERON:0000344!2.94e-10!15;UBERON:0005177!1.02e-09!85;UBERON:0001242!2.75e-09!13;UBERON:0000060!2.75e-09!13;UBERON:0001262!2.75e-09!13;UBERON:0004786!2.75e-09!13;UBERON:0009569!5.68e-09!66;UBERON:0000466!1.18e-08!79;UBERON:0005172!3.76e-08!49;UBERON:0005173!3.76e-08!49;UBERON:0002417!3.76e-08!49;UBERON:0000916!3.76e-08!49;UBERON:0001041!1.11e-07!92;UBERON:0000077!2.56e-07!97;UBERON:0003350!7.32e-07!9;UBERON:0004808!7.32e-07!9;UBERON:0001277!7.32e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-22,31;UBERON:0001007,9.56e-19,116;UBERON:0001555,9.56e-19,116;UBERON:0007026,9.56e-19,116;UBERON:0005409,3.48e-18,47;UBERON:0004119,5.69e-18,118;UBERON:0000925,5.69e-18,118;UBERON:0006595,5.69e-18,118;UBERON:0004921,1.27e-17,114;UBERON:0009854,1.40e-15,23;UBERON:0009856,1.40e-15,23;UBERON:0002107,8.35e-15,22;UBERON:0007499,8.35e-15,22;UBERON:0006925,8.35e-15,22;UBERON:0009497,8.35e-15,22;UBERON:0000015,8.35e-15,22;UBERON:0002423,8.35e-15,22;UBERON:0006235,8.35e-15,22;UBERON:0008835,8.35e-15,22;UBERON:0003894,8.35e-15,22;UBERON:0004161,8.35e-15,22;UBERON:0008836,8.35e-15,22;UBERON:0002365,6.24e-13,25;UBERON:0002330,6.24e-13,25;UBERON:0000344,1.48e-11,15;UBERON:0001242,1.93e-10,13;UBERON:0001262,1.93e-10,13;UBERON:0004786,1.93e-10,13;UBERON:0003350,1.17e-07,9;UBERON:0004808,1.17e-07,9;UBERON:0001277,1.17e-07,9;UBERON:0005177,1.77e-07,79;UBERON:0003929,9.00e-07,55 | |||
|phase1_expression=0,7.32848356042658,12.739978702907,38.1104906246606,44.5797199652249,7.55456723603504,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,9.91953021319121,10.3234176480227,5.16808767703518,7.75371593086335,6.46413698057667,26.0332084655232,18.146169342715,4.21287970245079,0,0,0,23.6858328196045,19.4494535069436,21.4377824075488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,11.3047150593654,4.30211938490693,14.9593693415705,34.5410042648203,14.9448576012964,30.4658283226188,7.3031098468511,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,0,11.3042040921869,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,1.73036477414062,0,0,0,0,0,20.5030937339934,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.248813941220186,0.758168275301024,0,0,0,0,0.452114453507145,0,0.12811372028485,0,0,0,0,0,0,0,0.696504333044333,4.11564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,37.0069036941854,12.6936271998501,0,1.16118335930219,10.6959992897337,20.3700359869576,16.4559752445204,16.9300807240178,18.0321043386914,20.9167672499494,24.1281800448259,29.6445143341315,25.1503672383665,28.7622210769351,25.7204279350886,22.5029638777435,0,0.342745537829186,0,0.814605311381257,2.52138233317913,1.68325967736765,6.0707075639287,12.251642282307,7.69293766422737,9.00799296629144,20.7516838961004,2.16898637430922,2.75182593158484,4.27238013531222,5.07150303471257,11.8176808278684,15.2775511068852,12.9463261852865,17.1863340381537,16.4736847912849,23.0029130443767,28.6548529704748,22.7787501373629,21.4692046255045,7.71408878144222,11.0962009913574,4.61882975416512,0,0.162964976442026,0.339490171550376,2.11221223459652,2.01007508930179,2.61848004974615,1.95133647857799,1.26108115284953,0.664394068946325,0.797273843287435,2.62181303545181,0.518054945597687,1.88043776155965,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55492153374884,1.42452482933804,0.81443479676788,2.63952196756057,0,4.12727081463468,5.74414758233027,6.03536255218874,6.496641643377,5.84126781093462,5.68542244970086,9.81541069589265,6.77345018930971,2.21225730555071,3.16255825724996,2.06271086496374,0,0,0,0,0,0,0,0.608929898229199,0.469343416127421,0,0,1.31909002353184,1.93757312035087,1.56813604813205,0.477489376012546,0.820704498725306,29.1480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.790839983952838,4.47302827679067,3.78018692876304,5.43629569637619,7.42432716737004,2.69728692769641,4.95920734352016,5.49687478166462,17.1091764745167,2.4853572523477,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,3.17422537061296,0,0,0,0.19318959403219,10.8855835761686,10.2564909589668,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,2.91728060481953,2.30574478890781,2.5738091183002,3.33370091702423,2.88449080134452,1.60459604795908,2.52697211763797,1.77435509923168,3.9611531691076,3.183811253976,3.00918216302886,3.15895079255873,2.85776214769844,2.20180219295225,3.08654752741928,2.47251540481984,2.06078488188156,4.4573002810104,2.30718548007139,2.38436189947321,3.19762116591123,2.35273451038327,2.70766745253365,3.10977553883713,4.20911538300549,2.58027816307137,2.80571135828869,3.08451047122853,2.46261205938909,3.27384834535751,2.63392630016142,2.70069255373598,0.249810577937946,3.04111090979031,2.79332370262788,0.382576664137687,0.220591419119515,0 | |||
|short_description=p2@Ngef | |||
}} |
Latest revision as of 18:16, 1 October 2015
Short description: | p2@Ngef |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ngef_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 0bp_to_ENSMUST00000068681, NM_001111314, uc007bwy.2_5end |
EntrezGene: | Ngef |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.17e-07 | 9 |
epithelial cell of alimentary canal | 1.17e-07 | 9 |
epithelial cell | 3.88e-07 | 25 |
endodermal cell | 5.85e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.91e-22 | 31 |
digestive system | 9.56e-19 | 116 |
digestive tract | 9.56e-19 | 116 |
primitive gut | 9.56e-19 | 116 |
gastrointestinal system | 3.48e-18 | 47 |
endoderm-derived structure | 5.69e-18 | 118 |
endoderm | 5.69e-18 | 118 |
presumptive endoderm | 5.69e-18 | 118 |
subdivision of digestive tract | 1.27e-17 | 114 |
digestive tract diverticulum | 1.40e-15 | 23 |
sac | 1.40e-15 | 23 |
liver | 8.35e-15 | 22 |
epithelial sac | 8.35e-15 | 22 |
digestive gland | 8.35e-15 | 22 |
epithelium of foregut-midgut junction | 8.35e-15 | 22 |
anatomical boundary | 8.35e-15 | 22 |
hepatobiliary system | 8.35e-15 | 22 |
foregut-midgut junction | 8.35e-15 | 22 |
hepatic diverticulum | 8.35e-15 | 22 |
liver primordium | 8.35e-15 | 22 |
septum transversum | 8.35e-15 | 22 |
liver bud | 8.35e-15 | 22 |
exocrine gland | 6.24e-13 | 25 |
exocrine system | 6.24e-13 | 25 |
mucosa | 1.48e-11 | 15 |
intestinal mucosa | 1.93e-10 | 13 |
wall of intestine | 1.93e-10 | 13 |
gastrointestinal system mucosa | 1.93e-10 | 13 |
epithelium of mucosa | 1.17e-07 | 9 |
gastrointestinal system epithelium | 1.17e-07 | 9 |
intestinal epithelium | 1.17e-07 | 9 |
trunk region element | 1.77e-07 | 79 |
gut epithelium | 9.00e-07 | 55 |