FFCP PHASE1:Mm9::chr6:78375967..78375979,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19692 | |EntrezGene=19692 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=23 | |||
|TSSclassifier=NA | |||
|UniProt=P43137,Q3TV26 | |UniProt=P43137,Q3TV26 | ||
|association_with_transcript=0bp_to_ENSMUST00000079926,NM_009042,uc009cka.1_5end | |association_with_transcript=0bp_to_ENSMUST00000079926,NM_009042,uc009cka.1_5end | ||
|cluster_id=chr6:78375967..78375979,+ | |||
|description=CAGE_peak_1_at_Reg1_5end | |description=CAGE_peak_1_at_Reg1_5end | ||
|id=chr6:78375967..78375979,+ | |id=chr6:78375967..78375979,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.60e-09!9;CL:0002251!8.60e-09!9;CL:0000239!6.30e-07!6;CL:0000677!6.30e-07!6;CL:0000212!6.30e-07!6;CL:0000584!6.30e-07!6 | |ontology_enrichment_celltype=CL:0002563!8.60e-09!9;CL:0002251!8.60e-09!9;CL:0000239!6.30e-07!6;CL:0000677!6.30e-07!6;CL:0000212!6.30e-07!6;CL:0000584!6.30e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.14e-10,9;CL:0002251,7.14e-10,9;CL:0000239,2.32e-09,6;CL:0000677,2.32e-09,6;CL:0000584,2.32e-09,6;CL:0000075,6.86e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.42e-38!59;UBERON:0000160!2.72e-34!43;UBERON:0001007!1.27e-21!128;UBERON:0001555!1.27e-21!128;UBERON:0007026!1.27e-21!128;UBERON:0004119!5.86e-21!130;UBERON:0000925!5.86e-21!130;UBERON:0006595!5.86e-21!130;UBERON:0004921!6.91e-20!126;UBERON:0004185!6.91e-20!126;UBERON:0001045!4.78e-14!13;UBERON:0002108!7.63e-14!16;UBERON:0001264!3.80e-13!12;UBERON:0003922!3.80e-13!12;UBERON:0002114!3.80e-13!12;UBERON:0003923!3.80e-13!12;UBERON:0003924!3.80e-13!12;UBERON:0003921!3.80e-13!12;UBERON:0002075!2.27e-12!19;UBERON:0000344!7.35e-12!15;UBERON:0004923!2.70e-10!24;UBERON:0001242!8.59e-10!13;UBERON:0000060!8.59e-10!13;UBERON:0001262!8.59e-10!13;UBERON:0004786!8.59e-10!13;UBERON:0003350!8.60e-09!9;UBERON:0004808!8.60e-09!9;UBERON:0001277!8.60e-09!9;UBERON:0000485!9.61e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.69e-29,47;UBERON:0000160,9.89e-24,31;UBERON:0002075,3.30e-16,19;UBERON:0001264,3.44e-16,12;UBERON:0001007,1.85e-13,116;UBERON:0001555,1.85e-13,116;UBERON:0007026,1.85e-13,116;UBERON:0004119,4.81e-13,118;UBERON:0000925,4.81e-13,118;UBERON:0006595,4.81e-13,118;UBERON:0004921,8.78e-12,114;UBERON:0000344,5.52e-11,15;UBERON:0004923,6.94e-11,24;UBERON:0003350,7.14e-10,9;UBERON:0004808,7.14e-10,9;UBERON:0001277,7.14e-10,9;UBERON:0001242,2.53e-08,13;UBERON:0001262,2.53e-08,13;UBERON:0004786,2.53e-08,13;UBERON:0000485,8.62e-08,11 | |||
|phase1_expression=0,15.3549179361319,68.7048851478199,106.467402380004,112.701539237928,11.7515490338323,28.9679674338452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,291.986171597967,179.856876356661,34.4539178469012,139.997648751699,72.3983341824587,0.950117097281869,0.504060259519861,0,0,0,0,0.866554859253824,9.64160943079256,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,4.30211938490693,0,0,0,0,14.6062196937022,0,0,0,0,0,0,0,0,0.253359865475099,0,5.709193985953,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,33.550517019262,0,0,217.64941103772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0,549.81685488504,20.0982430664294,0,0,0.257734922644187,1.21010114774006,1.77902435075896,9.13083005340284,152.323828755788,12.3524216043008,74.8978922224803,61.4775498607156,88.5136955520805,142.013466567367,22.4783571869682,74.279694923879,0,0.114248512609729,0,0,0,0.0701358198903186,0.69560190836683,2.06654207171443,0,0,7.70776830426587,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0.372140947668503,3.43241440426017,2.52578877947112,1.61457672169721,1.4473305640901,0,0,0,0,0,0,0,0.780534591431195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4088.55026087086,0.242780636154981,1.51161778482376,18.6719028958339,27.4630760379119,294.215436582339,181.675090097259,543.119391839393,855.237210744946,2260.61092951489,4410.71458277795,2574.26315947474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,94.1483102314418,0,0,1.23832120777933,1.66675074632741,2.0720530270516,2.05041341581538,0,0,0,0,175.659393714781,0,0.406638934253697,1.08005340821801,1.04544148007234,4.14888871117737,10.9240120571705,8.26534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.935726433781634,1.50409737833809,0,0.220591419119515,0 | |phase1_expression=0,15.3549179361319,68.7048851478199,106.467402380004,112.701539237928,11.7515490338323,28.9679674338452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,291.986171597967,179.856876356661,34.4539178469012,139.997648751699,72.3983341824587,0.950117097281869,0.504060259519861,0,0,0,0,0.866554859253824,9.64160943079256,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,4.30211938490693,0,0,0,0,14.6062196937022,0,0,0,0,0,0,0,0,0.253359865475099,0,5.709193985953,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,33.550517019262,0,0,217.64941103772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0,549.81685488504,20.0982430664294,0,0,0.257734922644187,1.21010114774006,1.77902435075896,9.13083005340284,152.323828755788,12.3524216043008,74.8978922224803,61.4775498607156,88.5136955520805,142.013466567367,22.4783571869682,74.279694923879,0,0.114248512609729,0,0,0,0.0701358198903186,0.69560190836683,2.06654207171443,0,0,7.70776830426587,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0.372140947668503,3.43241440426017,2.52578877947112,1.61457672169721,1.4473305640901,0,0,0,0,0,0,0,0.780534591431195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4088.55026087086,0.242780636154981,1.51161778482376,18.6719028958339,27.4630760379119,294.215436582339,181.675090097259,543.119391839393,855.237210744946,2260.61092951489,4410.71458277795,2574.26315947474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,94.1483102314418,0,0,1.23832120777933,1.66675074632741,2.0720530270516,2.05041341581538,0,0,0,0,175.659393714781,0,0.406638934253697,1.08005340821801,1.04544148007234,4.14888871117737,10.9240120571705,8.26534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.935726433781634,1.50409737833809,0,0.220591419119515,0 | ||
|short_description=p1@Reg1 | |short_description=p1@Reg1 | ||
}} | }} |
Latest revision as of 18:16, 1 October 2015
Short description: | p1@Reg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Reg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | 0bp_to_ENSMUST00000079926, NM_009042, uc009cka.1_5end |
EntrezGene: | Reg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.14e-10 | 9 |
epithelial cell of alimentary canal | 7.14e-10 | 9 |
brush border epithelial cell | 2.32e-09 | 6 |
gut absorptive cell | 2.32e-09 | 6 |
enterocyte | 2.32e-09 | 6 |
columnar/cuboidal epithelial cell | 6.86e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.69e-29 | 47 |
intestine | 9.89e-24 | 31 |
viscus | 3.30e-16 | 19 |
pancreas | 3.44e-16 | 12 |
digestive system | 1.85e-13 | 116 |
digestive tract | 1.85e-13 | 116 |
primitive gut | 1.85e-13 | 116 |
endoderm-derived structure | 4.81e-13 | 118 |
endoderm | 4.81e-13 | 118 |
presumptive endoderm | 4.81e-13 | 118 |
subdivision of digestive tract | 8.78e-12 | 114 |
mucosa | 5.52e-11 | 15 |
organ component layer | 6.94e-11 | 24 |
epithelium of mucosa | 7.14e-10 | 9 |
gastrointestinal system epithelium | 7.14e-10 | 9 |
intestinal epithelium | 7.14e-10 | 9 |
intestinal mucosa | 2.53e-08 | 13 |
wall of intestine | 2.53e-08 | 13 |
gastrointestinal system mucosa | 2.53e-08 | 13 |
simple columnar epithelium | 8.62e-08 | 11 |