FFCP PHASE1:Mm9::chr6:78330761..78330774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19694 | |EntrezGene=19694 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2450 | |||
|TSSclassifier=NA | |||
|UniProt=O09037,Q794C6 | |UniProt=O09037,Q794C6 | ||
|association_with_transcript=58bp_to_ENSMUST00000101272,NM_011259,uc009cjy.1_5end | |association_with_transcript=58bp_to_ENSMUST00000101272,NM_011259,uc009cjy.1_5end | ||
|cluster_id=chr6:78330761..78330774,+ | |||
|description=CAGE_peak_4_at_Reg3a_5end | |description=CAGE_peak_4_at_Reg3a_5end | ||
|id=chr6:78330761..78330774,+ | |id=chr6:78330761..78330774,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.20e-20!6;CL:0000677!1.20e-20!6;CL:0000212!1.20e-20!6;CL:0000584!1.20e-20!6;CL:0002563!4.42e-18!9;CL:0002251!4.42e-18!9;CL:0000075!1.26e-17!7;CL:0000066!4.31e-12!25;CL:0000473!8.39e-11!3;CL:0000627!8.39e-11!3;CL:0000682!8.39e-11!3;CL:0002076!1.66e-10!15;CL:0000223!1.16e-07!20 | |ontology_enrichment_celltype=CL:0000239!1.20e-20!6;CL:0000677!1.20e-20!6;CL:0000212!1.20e-20!6;CL:0000584!1.20e-20!6;CL:0002563!4.42e-18!9;CL:0002251!4.42e-18!9;CL:0000075!1.26e-17!7;CL:0000066!4.31e-12!25;CL:0000473!8.39e-11!3;CL:0000627!8.39e-11!3;CL:0000682!8.39e-11!3;CL:0002076!1.66e-10!15;CL:0000223!1.16e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.69e-17,6;CL:0000677,3.69e-17,6;CL:0000584,3.69e-17,6;CL:0000075,1.09e-14,7;CL:0000682,2.45e-12,3;CL:0002563,2.20e-11,9;CL:0002251,2.20e-11,9;CL:0000066,2.46e-09,25;CL:0002076,9.72e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.45e-36!15;UBERON:0001242!3.68e-30!13;UBERON:0000060!3.68e-30!13;UBERON:0001262!3.68e-30!13;UBERON:0004786!3.68e-30!13;UBERON:0000160!5.01e-29!43;UBERON:0004923!6.08e-22!24;UBERON:0005409!3.87e-20!59;UBERON:0003350!4.42e-18!9;UBERON:0004808!4.42e-18!9;UBERON:0001277!4.42e-18!9;UBERON:0000485!1.22e-14!11;UBERON:0000331!7.77e-11!3;UBERON:0002116!7.77e-11!3;UBERON:0001204!7.77e-11!3;UBERON:0001168!7.77e-11!3;UBERON:0001007!2.61e-09!128;UBERON:0001555!2.61e-09!128;UBERON:0007026!2.61e-09!128;UBERON:0004119!4.20e-09!130;UBERON:0000925!4.20e-09!130;UBERON:0006595!4.20e-09!130;UBERON:0001962!5.10e-08!2;UBERON:0001961!5.10e-08!2;UBERON:0001744!5.10e-08!2;UBERON:0004921!2.22e-07!126;UBERON:0004185!2.22e-07!126;UBERON:0002108!3.45e-07!16 | |ontology_enrichment_uberon=UBERON:0000344!1.45e-36!15;UBERON:0001242!3.68e-30!13;UBERON:0000060!3.68e-30!13;UBERON:0001262!3.68e-30!13;UBERON:0004786!3.68e-30!13;UBERON:0000160!5.01e-29!43;UBERON:0004923!6.08e-22!24;UBERON:0005409!3.87e-20!59;UBERON:0003350!4.42e-18!9;UBERON:0004808!4.42e-18!9;UBERON:0001277!4.42e-18!9;UBERON:0000485!1.22e-14!11;UBERON:0000331!7.77e-11!3;UBERON:0002116!7.77e-11!3;UBERON:0001204!7.77e-11!3;UBERON:0001168!7.77e-11!3;UBERON:0001007!2.61e-09!128;UBERON:0001555!2.61e-09!128;UBERON:0007026!2.61e-09!128;UBERON:0004119!4.20e-09!130;UBERON:0000925!4.20e-09!130;UBERON:0006595!4.20e-09!130;UBERON:0001962!5.10e-08!2;UBERON:0001961!5.10e-08!2;UBERON:0001744!5.10e-08!2;UBERON:0004921!2.22e-07!126;UBERON:0004185!2.22e-07!126;UBERON:0002108!3.45e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.93e-31,31;UBERON:0000344,7.17e-31,15;UBERON:0001242,6.32e-24,13;UBERON:0001262,6.32e-24,13;UBERON:0004786,6.32e-24,13;UBERON:0005409,1.30e-19,47;UBERON:0004923,1.23e-18,24;UBERON:0002108,8.90e-16,4;UBERON:0000331,2.24e-12,3;UBERON:0002116,2.24e-12,3;UBERON:0001204,2.24e-12,3;UBERON:0001168,2.24e-12,3;UBERON:0003350,2.20e-11,9;UBERON:0004808,2.20e-11,9;UBERON:0001277,2.20e-11,9;UBERON:0000485,2.82e-09,11;UBERON:0001962,4.29e-09,2;UBERON:0001961,4.29e-09,2;UBERON:0001744,4.29e-09,2;UBERON:0001007,2.04e-08,116;UBERON:0001555,2.04e-08,116;UBERON:0007026,2.04e-08,116;UBERON:0004119,3.21e-08,118;UBERON:0000925,3.21e-08,118;UBERON:0006595,3.21e-08,118 | |||
|phase1_expression=0,3.48975407639361,6.82498859084304,6.95667686005709,9.5170188689806,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.5881856213434,4.01962374880514,3.87685796543167,1.939241094173,4.75058548640935,3.2763916868791,2.43903561720835,0,0,0,0,0.997407872150954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,5.02456076660734,0,0,0,0,0,0,7.11793592316767,0,0,0,0,6.29173586057955,7.5648317456143,6.77080329064848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,8.4334886859999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,6.82498859084304,6.95667686005709,9.5170188689806,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.5881856213434,4.01962374880514,3.87685796543167,1.939241094173,4.75058548640935,3.2763916868791,2.43903561720835,0,0,0,0,0.997407872150954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,5.02456076660734,0,0,0,0,0,0,7.11793592316767,0,0,0,0,6.29173586057955,7.5648317456143,6.77080329064848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,8.4334886859999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Reg3a | |short_description=p4@Reg3a | ||
}} | }} |
Latest revision as of 18:14, 1 October 2015
Short description: | p4@Reg3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Reg3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2450 |
Association with transcript: | 58bp_to_ENSMUST00000101272, NM_011259, uc009cjy.1_5end |
EntrezGene: | Reg3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.69e-17 | 6 |
gut absorptive cell | 3.69e-17 | 6 |
enterocyte | 3.69e-17 | 6 |
columnar/cuboidal epithelial cell | 1.09e-14 | 7 |
M cell of gut | 2.45e-12 | 3 |
intestinal epithelial cell | 2.20e-11 | 9 |
epithelial cell of alimentary canal | 2.20e-11 | 9 |
epithelial cell | 2.46e-09 | 25 |
endo-epithelial cell | 9.72e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.93e-31 | 31 |
mucosa | 7.17e-31 | 15 |
intestinal mucosa | 6.32e-24 | 13 |
wall of intestine | 6.32e-24 | 13 |
gastrointestinal system mucosa | 6.32e-24 | 13 |
gastrointestinal system | 1.30e-19 | 47 |
organ component layer | 1.23e-18 | 24 |
small intestine | 8.90e-16 | 4 |
ileal mucosa | 2.24e-12 | 3 |
ileum | 2.24e-12 | 3 |
mucosa of small intestine | 2.24e-12 | 3 |
wall of small intestine | 2.24e-12 | 3 |
epithelium of mucosa | 2.20e-11 | 9 |
gastrointestinal system epithelium | 2.20e-11 | 9 |
intestinal epithelium | 2.20e-11 | 9 |
simple columnar epithelium | 2.82e-09 | 11 |
gut-associated lymphoid tissue | 4.29e-09 | 2 |
mucosa-associated lymphoid tissue | 4.29e-09 | 2 |
lymphoid tissue | 4.29e-09 | 2 |
digestive system | 2.04e-08 | 116 |
digestive tract | 2.04e-08 | 116 |
primitive gut | 2.04e-08 | 116 |
endoderm-derived structure | 3.21e-08 | 118 |
endoderm | 3.21e-08 | 118 |
presumptive endoderm | 3.21e-08 | 118 |