FFCP PHASE1:Mm9::chr1:88998165..88998192,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76768 | |EntrezGene=76768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=F8VPQ6,Q0VD75 | |UniProt=F8VPQ6,Q0VD75 | ||
|association_with_transcript=0bp_to_ENSMUST00000113270,NM_001081082,uc007bwa.1_5end | |association_with_transcript=0bp_to_ENSMUST00000113270,NM_001081082,uc007bwa.1_5end | ||
|cluster_id=chr1:88998165..88998192,- | |||
|description=CAGE_peak_1_at_Alpi_5end | |description=CAGE_peak_1_at_Alpi_5end | ||
|id=chr1:88998165..88998192,- | |id=chr1:88998165..88998192,- | ||
|ontology_enrichment_celltype=CL:0002563!2.41e-08!9;CL:0002251!2.41e-08!9;CL:0000239!5.75e-07!6;CL:0000677!5.75e-07!6;CL:0000212!5.75e-07!6;CL:0000584!5.75e-07!6 | |ontology_enrichment_celltype=CL:0002563!2.41e-08!9;CL:0002251!2.41e-08!9;CL:0000239!5.75e-07!6;CL:0000677!5.75e-07!6;CL:0000212!5.75e-07!6;CL:0000584!5.75e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.73e-10,9;CL:0002251,6.73e-10,9;CL:0000239,3.30e-08,6;CL:0000677,3.30e-08,6;CL:0000584,3.30e-08,6;CL:0000075,7.55e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.27e-23!59;UBERON:0000160!1.62e-20!43;UBERON:0000344!8.16e-14!15;UBERON:0001242!6.08e-12!13;UBERON:0000060!6.08e-12!13;UBERON:0001262!6.08e-12!13;UBERON:0004786!6.08e-12!13;UBERON:0001007!2.49e-11!128;UBERON:0001555!2.49e-11!128;UBERON:0007026!2.49e-11!128;UBERON:0004119!7.18e-11!130;UBERON:0000925!7.18e-11!130;UBERON:0006595!7.18e-11!130;UBERON:0004921!3.49e-10!126;UBERON:0004185!3.49e-10!126;UBERON:0003350!2.41e-08!9;UBERON:0004808!2.41e-08!9;UBERON:0001277!2.41e-08!9;UBERON:0004923!1.89e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.88e-30,31;UBERON:0005409,1.43e-29,47;UBERON:0000344,1.29e-16,15;UBERON:0001242,2.58e-14,13;UBERON:0001262,2.58e-14,13;UBERON:0004786,2.58e-14,13;UBERON:0003350,6.73e-10,9;UBERON:0004808,6.73e-10,9;UBERON:0001277,6.73e-10,9;UBERON:0004923,1.26e-08,24;UBERON:0000485,1.11e-07,11;UBERON:0001007,1.99e-07,116;UBERON:0001555,1.99e-07,116;UBERON:0007026,1.99e-07,116;UBERON:0004119,4.10e-07,118;UBERON:0000925,4.10e-07,118;UBERON:0006595,4.10e-07,118 | |||
|phase1_expression=0,718.540364329444,1102.46315704085,1626.04759998552,1490.66569232033,86.1220664907995,115.171031813594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,964.914301867036,860.743622564022,523.699551272898,483.745721686641,397.113481840093,655.200750285577,408.540840340848,97.5614246883341,0,0,0,4.04392267651784,31.4183479727551,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,73.1715428886427,0.170430322578058,0,0,0,0,0,0,0,0,0,101.395285190525,0,0,0,0,0.230615497256059,0,0,8.67099480174761,0,0,0,0,0,0,70.8288692628864,0,0,1145.46943555532,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8280.62512035696,1332.30195485094,0,0.464473343720877,22.2940708087221,210.154232657523,351.57968731874,736.743849933942,1572.58930995851,1606.80300228745,1203.64431494449,1551.06465603281,1148.33847313162,1585.51743686605,954.46562824665,1648.09317745314,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,3.56476192493988,0.287696137450811,0,0,0,0,0,0.505157755894224,0.358794827043824,0,0,0,0,1.52770577197669,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.178065603667255,0,0,0,0,2.72091201268276,0,0,0.307435147943927,265.147428790595,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1947.67495036066,0,0,0,0.185194527369712,0,0,0,0,0,0,22.9120948323627,0.158167996790568,1.82987520414164,29.4854580443517,15.0543573130417,63.98023117763,9.03591120778299,14.3817012962085,1.04702376793612,118.59770056199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0.209613162627982,4.41224420280034,26.8918540639954,22.4578212390395,32.0919209591815,32.8506375292937,32.4453503859507,23.2010399904874,21.537546718073,26.1222621811867,25.099299933603,20.4806287251722,22.7133278851917,25.6569263216728,34.6152156674778,26.0542088637883,19.2006781335833,24.3141854438292,25.5126723243633,25.8716621605545,23.621454484248,24.6228508964779,28.7196917410253,31.831435083979,24.8521528337927,22.4456908663095,22.7779234798414,24.7246250762664,26.6000178060298,22.930652495523,15.6254354894725,0,44.680937213073,85.0889374031261,0,0,0 | |phase1_expression=0,718.540364329444,1102.46315704085,1626.04759998552,1490.66569232033,86.1220664907995,115.171031813594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,964.914301867036,860.743622564022,523.699551272898,483.745721686641,397.113481840093,655.200750285577,408.540840340848,97.5614246883341,0,0,0,4.04392267651784,31.4183479727551,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,73.1715428886427,0.170430322578058,0,0,0,0,0,0,0,0,0,101.395285190525,0,0,0,0,0.230615497256059,0,0,8.67099480174761,0,0,0,0,0,0,70.8288692628864,0,0,1145.46943555532,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8280.62512035696,1332.30195485094,0,0.464473343720877,22.2940708087221,210.154232657523,351.57968731874,736.743849933942,1572.58930995851,1606.80300228745,1203.64431494449,1551.06465603281,1148.33847313162,1585.51743686605,954.46562824665,1648.09317745314,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,3.56476192493988,0.287696137450811,0,0,0,0,0,0.505157755894224,0.358794827043824,0,0,0,0,1.52770577197669,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.178065603667255,0,0,0,0,2.72091201268276,0,0,0.307435147943927,265.147428790595,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1947.67495036066,0,0,0,0.185194527369712,0,0,0,0,0,0,22.9120948323627,0.158167996790568,1.82987520414164,29.4854580443517,15.0543573130417,63.98023117763,9.03591120778299,14.3817012962085,1.04702376793612,118.59770056199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0.209613162627982,4.41224420280034,26.8918540639954,22.4578212390395,32.0919209591815,32.8506375292937,32.4453503859507,23.2010399904874,21.537546718073,26.1222621811867,25.099299933603,20.4806287251722,22.7133278851917,25.6569263216728,34.6152156674778,26.0542088637883,19.2006781335833,24.3141854438292,25.5126723243633,25.8716621605545,23.621454484248,24.6228508964779,28.7196917410253,31.831435083979,24.8521528337927,22.4456908663095,22.7779234798414,24.7246250762664,26.6000178060298,22.930652495523,15.6254354894725,0,44.680937213073,85.0889374031261,0,0,0 | ||
|short_description=p1@Alpi | |short_description=p1@Alpi | ||
}} | }} |
Latest revision as of 17:55, 1 October 2015
Short description: | p1@Alpi |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Alpi_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_ENSMUST00000113270, NM_001081082, uc007bwa.1_5end |
EntrezGene: | Alpi |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.73e-10 | 9 |
epithelial cell of alimentary canal | 6.73e-10 | 9 |
brush border epithelial cell | 3.30e-08 | 6 |
gut absorptive cell | 3.30e-08 | 6 |
enterocyte | 3.30e-08 | 6 |
columnar/cuboidal epithelial cell | 7.55e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.88e-30 | 31 |
gastrointestinal system | 1.43e-29 | 47 |
mucosa | 1.29e-16 | 15 |
intestinal mucosa | 2.58e-14 | 13 |
wall of intestine | 2.58e-14 | 13 |
gastrointestinal system mucosa | 2.58e-14 | 13 |
epithelium of mucosa | 6.73e-10 | 9 |
gastrointestinal system epithelium | 6.73e-10 | 9 |
intestinal epithelium | 6.73e-10 | 9 |
organ component layer | 1.26e-08 | 24 |
simple columnar epithelium | 1.11e-07 | 11 |
digestive system | 1.99e-07 | 116 |
digestive tract | 1.99e-07 | 116 |
primitive gut | 1.99e-07 | 116 |
endoderm-derived structure | 4.10e-07 | 118 |
endoderm | 4.10e-07 | 118 |
presumptive endoderm | 4.10e-07 | 118 |