Personal tools

FFCP PHASE1:Mm9::chr5:115992981..115993016,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=19303|HGNC=|MCL_coexpression_id=359|UniProt=|association_with_transcript=22bp_to_ENSMUST00000157050_5end|description=CAGE_peak_3_at_Pxn_5end|id=chr5:115992981..115993016,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.95e-21!59;UBERON:0004119!9.32e-19!130;UBERON:0000925!9.32e-19!130;UBERON:0006595!9.32e-19!130;UBERON:0001007!1.17e-17!128;UBERON:0001555!1.17e-17!128;UBERON:0007026!1.17e-17!128;UBERON:0000160!1.96e-17!43;UBERON:0004921!1.20e-16!126;UBERON:0004185!1.20e-16!126;UBERON:0004923!7.63e-11!24;UBERON:0000344!8.48e-09!15;UBERON:0001242!8.19e-08!13;UBERON:0000060!8.19e-08!13;UBERON:0001262!8.19e-08!13;UBERON:0004786!8.19e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.33e-22,47;UBERON:0000160,1.06e-18,31;UBERON:0004119,1.71e-16,118;UBERON:0000925,1.71e-16,118;UBERON:0006595,1.71e-16,118;UBERON:0001007,2.40e-15,116;UBERON:0001555,2.40e-15,116;UBERON:0007026,2.40e-15,116;UBERON:0004921,2.70e-14,114;UBERON:0004923,3.58e-12,24;UBERON:0000344,2.92e-10,15;UBERON:0001242,4.44e-09,13;UBERON:0001262,4.44e-09,13;UBERON:0004786,4.44e-09,13|phase1_expression=0,11.8651638597383,7.27998783023258,10.2837831844322,10.5188103288733,7.55456723603504,8.1764424208434,0.774739940649458,0.140788722151667,0,0,0.0797721589953364,1.54080656938085,0.699363219351979,0.666219523631325,0.809901069559304,0.699561878128147,0.315462165358238,0.685572168028694,0.84877930359606,1.10556277196391,0.496454756004426,0,9.75953779039781,6.65286915094793,7.46501553349526,9.47676391549965,10.9890328669803,10.8313349090133,4.78857246543868,8.86922042621219,0,0,0,6.06588401477677,3.65716219788683,4.49172583777212,35.9937202433741,17.1893775795236,17.7998072951091,42.352667138233,35.5183652178392,40.7828696546169,0,0,0,5.47673941043627,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0.0755715601067855,0.869593466105033,0,0,0,0,0,1.54488862144927,0,0,0,0.14084341977668,0,0,0,2.81438353314578,3.29367825117628,5.56076889516262,1.59857431606684,0.776813650941515,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,12.6069433544531,0.144599356919912,12.3845477272982,0.970601099684455,1.98757366614354,1.45462575940567,13.0474232852686,0,0,15.8383374229327,1.67741174308288,1.79970819298022,2.03312363316904,0,0,0,0,0,0,0,0.611036183101898,4.22983700074316,4.80173241023982,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,1.40442637462647,3.08817488537658,3.9782889915383,0.414251545071004,0,0.720248245844059,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0,0,0,22.7988960258821,16.9248362664668,0,0.232236671860439,4.12375876230699,8.26902450955704,15.1217069814512,17.5007576023554,18.0321043386914,12.3524216043008,16.5881237808178,13.9269530428806,19.6913727990311,14.3811105384675,13.400559092231,15.9313018603494,0.948339504765408,1.02823661348756,1.1270773567308,1.4255592949172,1.74557238450863,1.40271639780637,1.45444035385792,1.03327103585722,1.41298855057237,0.987177311374404,0.592905254174298,1.00107063429656,0.196558995113203,0.674586337154561,1.42002084971952,1.20588579876208,1.52775511068852,1.15078454980324,1.94562272130042,0.549122826376163,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,1.84753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,3.68513766371995,2.85652369063216,4.48807390072937,1.26108115284953,1.99318220683897,1.59454768657487,1.3109065177259,1.72684981865896,2.31438493730419,0,0,2.45882136509518,1.93155722413313,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,1.84522110770749,1.78065603667255,0.651547837414304,2.8044920905331,1.32745138339963,0.485561272309963,1.51161778482376,2.26326095707078,1.77181135728464,3.3817866273832,4.65170927702798,2.18120237686503,2.49548164869305,0.632073515871632,2.10837217149998,4.12542172992747,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,9.38686832254841,12.4980921809654,1.10264199027481,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0.328281799490123,19.8206968908299,0,3.75915937755276,2.27025554759545,1.66675074632741,1.69531611304222,1.50363650493128,0.686334519619568,2.88963330989554,4.05859211738608,1.52019971184866,11.4560474161814,0.158167996790568,1.21991680276109,2.05210147561422,3.13632444021703,4.36725127492355,3.37160865962052,6.03370226794952,6.54389854960074,14.1280320888054,1.24267862617385,0,0.149516546043979,0,0.972255941720238,0.129159823477731,0.844780627453891,0.352071715937262,0.911430693907651,0.209718688851422,0.966336483304024,0,2.8441000856536,0.810900861160657,1.33524244314275,2.07873316764472,1.61124026100733,0.993406773906324,1.9231271923195,1.47689527174577,2.01932899896295,2.59103142626999,2.21817607301049,2.43644701849381,2.5977197242889,3.97381467417334,0.453460767230423,0.443971906748129,2.9605572681127,1.00730769818447,0.579568782096571,1.31377732815827,5.31139710375069,0.643105137237198,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,1.10306105070008,0.888986911206461,0.824140228955577,1.28367683836726,1.51618327058278,1.01391719956096,1.69763707247469,0.936415074698824,1.72867911493147,2.06767688240208,0.476293691283074,1.97003354106254,1.35036454324594,0.824171801606613,1.03039244094078,2.05721551431249,1.4198064492747,1.43061713968393,1.45346416632329,1.69396884747595,1.60767754994185,1.09756783723664,1.57841826862706,0.950628796921032,0,1.30498519936592,0.886540341380071,0.818462086339379,1.85924209423159,1.73615949883027,0.499621155875892,1.16965804222704,2.36358159453128,0.382576664137687,1.32354851471709,1.62307484934295|short_description=p3@Pxn}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19303
|HGNC=
|MCL_coexpression_id=359
|TSSclassifier=NA
|UniProt=
|association_with_transcript=22bp_to_ENSMUST00000157050_5end
|cluster_id=chr5:115992981..115993016,+
|description=CAGE_peak_3_at_Pxn_5end
|id=chr5:115992981..115993016,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.95e-21!59;UBERON:0004119!9.32e-19!130;UBERON:0000925!9.32e-19!130;UBERON:0006595!9.32e-19!130;UBERON:0001007!1.17e-17!128;UBERON:0001555!1.17e-17!128;UBERON:0007026!1.17e-17!128;UBERON:0000160!1.96e-17!43;UBERON:0004921!1.20e-16!126;UBERON:0004185!1.20e-16!126;UBERON:0004923!7.63e-11!24;UBERON:0000344!8.48e-09!15;UBERON:0001242!8.19e-08!13;UBERON:0000060!8.19e-08!13;UBERON:0001262!8.19e-08!13;UBERON:0004786!8.19e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.33e-22,47;UBERON:0000160,1.06e-18,31;UBERON:0004119,1.71e-16,118;UBERON:0000925,1.71e-16,118;UBERON:0006595,1.71e-16,118;UBERON:0001007,2.40e-15,116;UBERON:0001555,2.40e-15,116;UBERON:0007026,2.40e-15,116;UBERON:0004921,2.70e-14,114;UBERON:0004923,3.58e-12,24;UBERON:0000344,2.92e-10,15;UBERON:0001242,4.44e-09,13;UBERON:0001262,4.44e-09,13;UBERON:0004786,4.44e-09,13
|phase1_expression=0,11.8651638597383,7.27998783023258,10.2837831844322,10.5188103288733,7.55456723603504,8.1764424208434,0.774739940649458,0.140788722151667,0,0,0.0797721589953364,1.54080656938085,0.699363219351979,0.666219523631325,0.809901069559304,0.699561878128147,0.315462165358238,0.685572168028694,0.84877930359606,1.10556277196391,0.496454756004426,0,9.75953779039781,6.65286915094793,7.46501553349526,9.47676391549965,10.9890328669803,10.8313349090133,4.78857246543868,8.86922042621219,0,0,0,6.06588401477677,3.65716219788683,4.49172583777212,35.9937202433741,17.1893775795236,17.7998072951091,42.352667138233,35.5183652178392,40.7828696546169,0,0,0,5.47673941043627,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0.0755715601067855,0.869593466105033,0,0,0,0,0,1.54488862144927,0,0,0,0.14084341977668,0,0,0,2.81438353314578,3.29367825117628,5.56076889516262,1.59857431606684,0.776813650941515,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,12.6069433544531,0.144599356919912,12.3845477272982,0.970601099684455,1.98757366614354,1.45462575940567,13.0474232852686,0,0,15.8383374229327,1.67741174308288,1.79970819298022,2.03312363316904,0,0,0,0,0,0,0,0.611036183101898,4.22983700074316,4.80173241023982,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,1.40442637462647,3.08817488537658,3.9782889915383,0.414251545071004,0,0.720248245844059,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0,0,0,22.7988960258821,16.9248362664668,0,0.232236671860439,4.12375876230699,8.26902450955704,15.1217069814512,17.5007576023554,18.0321043386914,12.3524216043008,16.5881237808178,13.9269530428806,19.6913727990311,14.3811105384675,13.400559092231,15.9313018603494,0.948339504765408,1.02823661348756,1.1270773567308,1.4255592949172,1.74557238450863,1.40271639780637,1.45444035385792,1.03327103585722,1.41298855057237,0.987177311374404,0.592905254174298,1.00107063429656,0.196558995113203,0.674586337154561,1.42002084971952,1.20588579876208,1.52775511068852,1.15078454980324,1.94562272130042,0.549122826376163,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,1.84753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,3.68513766371995,2.85652369063216,4.48807390072937,1.26108115284953,1.99318220683897,1.59454768657487,1.3109065177259,1.72684981865896,2.31438493730419,0,0,2.45882136509518,1.93155722413313,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,1.84522110770749,1.78065603667255,0.651547837414304,2.8044920905331,1.32745138339963,0.485561272309963,1.51161778482376,2.26326095707078,1.77181135728464,3.3817866273832,4.65170927702798,2.18120237686503,2.49548164869305,0.632073515871632,2.10837217149998,4.12542172992747,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,9.38686832254841,12.4980921809654,1.10264199027481,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0.328281799490123,19.8206968908299,0,3.75915937755276,2.27025554759545,1.66675074632741,1.69531611304222,1.50363650493128,0.686334519619568,2.88963330989554,4.05859211738608,1.52019971184866,11.4560474161814,0.158167996790568,1.21991680276109,2.05210147561422,3.13632444021703,4.36725127492355,3.37160865962052,6.03370226794952,6.54389854960074,14.1280320888054,1.24267862617385,0,0.149516546043979,0,0.972255941720238,0.129159823477731,0.844780627453891,0.352071715937262,0.911430693907651,0.209718688851422,0.966336483304024,0,2.8441000856536,0.810900861160657,1.33524244314275,2.07873316764472,1.61124026100733,0.993406773906324,1.9231271923195,1.47689527174577,2.01932899896295,2.59103142626999,2.21817607301049,2.43644701849381,2.5977197242889,3.97381467417334,0.453460767230423,0.443971906748129,2.9605572681127,1.00730769818447,0.579568782096571,1.31377732815827,5.31139710375069,0.643105137237198,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,1.10306105070008,0.888986911206461,0.824140228955577,1.28367683836726,1.51618327058278,1.01391719956096,1.69763707247469,0.936415074698824,1.72867911493147,2.06767688240208,0.476293691283074,1.97003354106254,1.35036454324594,0.824171801606613,1.03039244094078,2.05721551431249,1.4198064492747,1.43061713968393,1.45346416632329,1.69396884747595,1.60767754994185,1.09756783723664,1.57841826862706,0.950628796921032,0,1.30498519936592,0.886540341380071,0.818462086339379,1.85924209423159,1.73615949883027,0.499621155875892,1.16965804222704,2.36358159453128,0.382576664137687,1.32354851471709,1.62307484934295
|short_description=p3@Pxn
}}

Latest revision as of 17:43, 1 October 2015

Short description:p3@Pxn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pxn_5end
Coexpression cluster:MCL_coexpression_mm9:359
Association with transcript: 22bp_to_ENSMUST00000157050_5end
EntrezGene:Pxn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pxn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I210.99
Ileum epithelium, pool1.CNhs13199.10252-104B910.83
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H235.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H440.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H715.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I322.80
intestine, adult.CNhs10496.178-9A316.92
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F717.50
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E912.35
intestine, neonate N06.CNhs11102.688-20B816.59
intestine, neonate N07.CNhs11095.720-20F213.93
intestine, neonate N10.CNhs11098.755-23A519.69
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E313.40
intestine, neonate N30.CNhs11131.1384-42G115.93
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A96.03
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I114.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system3.33e-2247
intestine1.06e-1831
endoderm-derived structure1.71e-16118
endoderm1.71e-16118
presumptive endoderm1.71e-16118
digestive system2.40e-15116
digestive tract2.40e-15116
primitive gut2.40e-15116
subdivision of digestive tract2.70e-14114
organ component layer3.58e-1224
mucosa2.92e-1015
intestinal mucosa4.44e-0913
wall of intestine4.44e-0913
gastrointestinal system mucosa4.44e-0913
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:115992981..115993016,%2B&oldid=4314618"