Personal tools

FFCP PHASE1:Mm9::chrX:156146525..156146544,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chrX:156146525..156146544,+ |short_description=p1@Sh3kbp1 |description=CAGE_peak_1_at_Sh3kbp1_5end |association_with_transcript=0bp_to_ENSMUST00000080394,ENSMUS...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:156146525..156146544,+
|DHSsupport=NA
|short_description=p1@Sh3kbp1
|DPIdataset=NA
|description=CAGE_peak_1_at_Sh3kbp1_5end
|association_with_transcript=0bp_to_ENSMUST00000080394,ENSMUST00000141354,NM_021389,uc009usv.2,uc009usw.2,uc012hrf.1_5end
|EntrezGene=58194
|EntrezGene=58194
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=Q8R550,E9Q0C1,B1AVE8,Q3TT90
|UniProt=Q8R550,E9Q0C1,B1AVE8,Q3TT90
|association_with_transcript=0bp_to_ENSMUST00000080394,ENSMUST00000141354,NM_021389,uc009usv.2,uc009usw.2,uc012hrf.1_5end
|cluster_id=chrX:156146525..156146544,+
|description=CAGE_peak_1_at_Sh3kbp1_5end
|id=chrX:156146525..156146544,+
|ontology_enrichment_celltype=CL:0000791!2.07e-07!9;CL:0000789!2.07e-07!9;CL:0002420!2.07e-07!9;CL:0002419!2.07e-07!9;CL:0000790!2.07e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,2.07e-08,9;CL:0000789,2.07e-08,9;CL:0002420,2.07e-08,9;CL:0002419,2.07e-08,9;CL:0000790,2.07e-08,9;CL:0000624,1.36e-07,8;CL:0000838,9.95e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.41e-12!29;UBERON:0003408!6.72e-10!24;UBERON:0002370!1.70e-09!23;UBERON:0000974!1.70e-09!23;UBERON:0004807!1.70e-09!23;UBERON:0005058!1.70e-09!23;UBERON:0003351!1.70e-09!23;UBERON:0009113!1.70e-09!23;UBERON:0003295!1.70e-09!23;UBERON:0009722!1.70e-09!23;UBERON:0005562!1.70e-09!23;UBERON:0007690!1.70e-09!23;UBERON:0001004!2.63e-09!42;UBERON:0002193!2.74e-09!48;UBERON:0000065!6.31e-09!41;UBERON:0006562!1.80e-08!24;UBERON:0001557!1.80e-08!24;UBERON:0001042!1.80e-08!24;UBERON:0008814!1.80e-08!24;UBERON:0009145!1.80e-08!24;UBERON:0002390!5.63e-08!45;UBERON:0003061!5.63e-08!45
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.58e-15,29;UBERON:0005057,3.58e-15,29;UBERON:0002193,1.09e-12,48;UBERON:0002405,1.09e-12,48;UBERON:0003408,1.86e-12,24;UBERON:0000077,2.02e-12,35;UBERON:0002370,5.54e-12,23;UBERON:0000974,5.54e-12,23;UBERON:0004807,5.54e-12,23;UBERON:0005058,5.54e-12,23;UBERON:0003351,5.54e-12,23;UBERON:0009113,5.54e-12,23;UBERON:0003295,5.54e-12,23;UBERON:0009722,5.54e-12,23;UBERON:0005562,5.54e-12,23;UBERON:0007690,5.54e-12,23;UBERON:0006562,4.74e-11,24;UBERON:0001557,4.74e-11,24;UBERON:0001042,4.74e-11,24;UBERON:0008814,4.74e-11,24;UBERON:0009145,4.74e-11,24;UBERON:0002390,4.84e-11,45;UBERON:0003061,4.84e-11,45;UBERON:0001004,4.85e-11,42;UBERON:0000065,1.37e-10,41;UBERON:0000072,1.01e-08,27
|phase1_expression=0.160148847104794,0,0,0,0,0,0.934450562382103,132.867899821382,100.663936338442,113.053166213523,34.243593645101,34.2222562089993,204.756072997722,193.985872967755,7.32841475994458,13.5658429151183,2.09868563438444,61.1996600794981,66.9118435996005,32.2536135366503,5.18764069921526,0,0,5.59973479776923,4.81759490241057,0,0,0,0.190023419456374,1.26015064879965,0.886922042621219,0,0,0,0.288851619751275,0,0,0,0,0,0.588231488031014,0,0,2.01434908760924,0.912392380975631,0,0,0.218025156380447,0,0,0.279972843250725,0,38.2544341811639,188.59415692295,195.942684900056,0,0,0,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,1.04182674111352,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.427115042397309,0.372798891650601,0.605809546665472,2.11600368298999,0.289864488701678,1.72084775396277,0,0,0,0,5.47733238513832,1.1930122580464,1.55871602761721,0.35333957451034,0,0,0,0,0.432982082022428,0,0,6.2801133845483,167.014934952426,2.52351636410202,1.21439728736295,1.52232739156071,1.38369298353635,0.60289056221049,0.940709657085638,0.628332956648377,0.247194967734374,3.61498392299779,2.65383165584962,3.23533699894818,1.98757366614354,3.39412677194655,0,0,0,2.29911349687732,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.62336413367868,0.162241263067758,2.03678727700633,2.36373244159177,0.505445516867349,0,0.780722657776222,0,1.44049703844279,1.05493372485001,0.680364991513279,0.640568601424249,0.281105173679186,0,0.215567992932842,0.378212160335639,0.879755620819744,1.7535658594206,0.834141747676794,2.43776516565517,2.88094990971121,1.79130840136644,0,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0.946978942340841,2.16440654922144,0.308534225774757,0.697601834251224,0.268273401399619,0.934122738937356,0.329119699826961,1.47750717671186,0.729619285912702,0.877199924551994,0.878200461164203,0.671032093801859,0,1.44066457330998,6.60837565967596,0.528901133327089,1.49301775374664,2.55460339046482,1.54640953586512,1.61346819698674,1.55664630691409,0.570676878337677,1.42358718463353,0.823494773620054,1.50801125280162,1.39269530428806,1.36474860983384,3.59527763461689,0.648414149624083,0.796565093017469,2.0863469104839,3.65595240351132,4.50830942692322,5.29493452397817,4.65485969202302,3.15611189506434,3.22506339333712,2.06654207171443,0.784993639206874,1.23397163921801,0.592905254174298,0,0.589676985339609,0,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,1.45921704097532,0.823684239564244,0,2.97712758134803,1.5601883655728,0.505157755894224,0.358794827043824,0,10.1614254591633,0.947457058852424,1.14075483509418,1.69745085775188,2.34690248288502,2.1775813467436,0.952174563544055,0.585400943573396,5.04432461139811,2.6575762757853,3.82691444777969,5.73521601505083,7.59813920209941,3.7608755231193,0,0,3.93411418415229,2.20749397043786,0.160550589987792,0.234423373184406,6.88526770582037,0.252470927204373,5.04813151066011,6.24701990874622,4.95473814785438,2.15071918157297,3.56477878531831,2.54768877709949,3.64329631507405,5.55286130031493,6.32460444714438,0.321321316421807,0.709700426041343,1.6025904330053,1.46598263418218,1.31976098378028,2.65490276679926,0.728341908464944,0.604647113929502,1.13163047853539,0.295301892880773,0.614870295887855,1.03371317267288,1.09060118843252,1.06949213515416,2.52829406348653,0,0,0.340439605753788,0.720244376125241,0.517434735131018,1.28602221018955,0.532020700926821,0.713475270408282,1.15184314421485,0,0.704015124191131,2.75381692122966,0.220528398054962,0.16488625294148,1.13025098687134,0.663442174209714,0.716234064018819,0.164140899745061,2.04036585640896,0,21.3588600997316,3.30218988741156,2.40752885580625,9.60679130723924,21.597687979922,17.1583629904892,2.20971958992012,1.53946597556024,2.21119958087078,0,0.949007980743406,1.62655573701479,1.51207477150522,1.46361807210128,0.87345025498471,0.674321731924103,1.48776220305605,0.26175594198403,0.777689839750757,4.34937519160848,0,4.18646328923141,2.48187735685646,3.30567020184881,3.35815541042101,2.02747350588934,2.69921648885234,0.781226309063701,0.209718688851422,0,0,88.7991248965181,3.04087822935246,6.7789231728786,15.7204195803132,23.4524971324401,41.9217658588469,52.8859977887863,55.531262217641,62.0943667181108,50.2202855856449,63.9238013767569,84.3010668398858,87.0717166844982,93.3846448430736,0,0,0.179427713218951,0.335769232728157,2.70465431645067,0.93841237725591,0.36630324853453,0.214368379079066,1.50471631210609,0,0,0.572895513439397,0,0,0,0,0,0,0,0.62272408550506,0,1.70733605754134,2.43106717068294,1.46729213839588,0.735374033800057,1.11123363900808,1.64828045791115,0.962757628775446,2.27427490587418,0.50695859978048,0.943131706930381,2.24739617927718,1.92075457214608,1.95280594449085,2.85776214769844,1.15884325944855,1.15745532278223,1.23625770240992,1.47198920134397,1.02860775715625,1.59728225543404,1.90748951957857,1.59881058295561,1.59985946706062,2.5384382367503,1.82927972872773,1.57841826862706,1.90125759384206,1.12228454331548,1.42362021749009,1.77308068276014,2.04615521584845,2.47898945897546,2.3148793317737,0.999242311751784,1.87145286756327,1.50409737833809,2.86932498103265,3.08827986767322,0.927471342481686
|phase1_expression=0.160148847104794,0,0,0,0,0,0.934450562382103,132.867899821382,100.663936338442,113.053166213523,34.243593645101,34.2222562089993,204.756072997722,193.985872967755,7.32841475994458,13.5658429151183,2.09868563438444,61.1996600794981,66.9118435996005,32.2536135366503,5.18764069921526,0,0,5.59973479776923,4.81759490241057,0,0,0,0.190023419456374,1.26015064879965,0.886922042621219,0,0,0,0.288851619751275,0,0,0,0,0,0.588231488031014,0,0,2.01434908760924,0.912392380975631,0,0,0.218025156380447,0,0,0.279972843250725,0,38.2544341811639,188.59415692295,195.942684900056,0,0,0,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,1.04182674111352,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.427115042397309,0.372798891650601,0.605809546665472,2.11600368298999,0.289864488701678,1.72084775396277,0,0,0,0,5.47733238513832,1.1930122580464,1.55871602761721,0.35333957451034,0,0,0,0,0.432982082022428,0,0,6.2801133845483,167.014934952426,2.52351636410202,1.21439728736295,1.52232739156071,1.38369298353635,0.60289056221049,0.940709657085638,0.628332956648377,0.247194967734374,3.61498392299779,2.65383165584962,3.23533699894818,1.98757366614354,3.39412677194655,0,0,0,2.29911349687732,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.62336413367868,0.162241263067758,2.03678727700633,2.36373244159177,0.505445516867349,0,0.780722657776222,0,1.44049703844279,1.05493372485001,0.680364991513279,0.640568601424249,0.281105173679186,0,0.215567992932842,0.378212160335639,0.879755620819744,1.7535658594206,0.834141747676794,2.43776516565517,2.88094990971121,1.79130840136644,0,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0.946978942340841,2.16440654922144,0.308534225774757,0.697601834251224,0.268273401399619,0.934122738937356,0.329119699826961,1.47750717671186,0.729619285912702,0.877199924551994,0.878200461164203,0.671032093801859,0,1.44066457330998,6.60837565967596,0.528901133327089,1.49301775374664,2.55460339046482,1.54640953586512,1.61346819698674,1.55664630691409,0.570676878337677,1.42358718463353,0.823494773620054,1.50801125280162,1.39269530428806,1.36474860983384,3.59527763461689,0.648414149624083,0.796565093017469,2.0863469104839,3.65595240351132,4.50830942692322,5.29493452397817,4.65485969202302,3.15611189506434,3.22506339333712,2.06654207171443,0.784993639206874,1.23397163921801,0.592905254174298,0,0.589676985339609,0,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,1.45921704097532,0.823684239564244,0,2.97712758134803,1.5601883655728,0.505157755894224,0.358794827043824,0,10.1614254591633,0.947457058852424,1.14075483509418,1.69745085775188,2.34690248288502,2.1775813467436,0.952174563544055,0.585400943573396,5.04432461139811,2.6575762757853,3.82691444777969,5.73521601505083,7.59813920209941,3.7608755231193,0,0,3.93411418415229,2.20749397043786,0.160550589987792,0.234423373184406,6.88526770582037,0.252470927204373,5.04813151066011,6.24701990874622,4.95473814785438,2.15071918157297,3.56477878531831,2.54768877709949,3.64329631507405,5.55286130031493,6.32460444714438,0.321321316421807,0.709700426041343,1.6025904330053,1.46598263418218,1.31976098378028,2.65490276679926,0.728341908464944,0.604647113929502,1.13163047853539,0.295301892880773,0.614870295887855,1.03371317267288,1.09060118843252,1.06949213515416,2.52829406348653,0,0,0.340439605753788,0.720244376125241,0.517434735131018,1.28602221018955,0.532020700926821,0.713475270408282,1.15184314421485,0,0.704015124191131,2.75381692122966,0.220528398054962,0.16488625294148,1.13025098687134,0.663442174209714,0.716234064018819,0.164140899745061,2.04036585640896,0,21.3588600997316,3.30218988741156,2.40752885580625,9.60679130723924,21.597687979922,17.1583629904892,2.20971958992012,1.53946597556024,2.21119958087078,0,0.949007980743406,1.62655573701479,1.51207477150522,1.46361807210128,0.87345025498471,0.674321731924103,1.48776220305605,0.26175594198403,0.777689839750757,4.34937519160848,0,4.18646328923141,2.48187735685646,3.30567020184881,3.35815541042101,2.02747350588934,2.69921648885234,0.781226309063701,0.209718688851422,0,0,88.7991248965181,3.04087822935246,6.7789231728786,15.7204195803132,23.4524971324401,41.9217658588469,52.8859977887863,55.531262217641,62.0943667181108,50.2202855856449,63.9238013767569,84.3010668398858,87.0717166844982,93.3846448430736,0,0,0.179427713218951,0.335769232728157,2.70465431645067,0.93841237725591,0.36630324853453,0.214368379079066,1.50471631210609,0,0,0.572895513439397,0,0,0,0,0,0,0,0.62272408550506,0,1.70733605754134,2.43106717068294,1.46729213839588,0.735374033800057,1.11123363900808,1.64828045791115,0.962757628775446,2.27427490587418,0.50695859978048,0.943131706930381,2.24739617927718,1.92075457214608,1.95280594449085,2.85776214769844,1.15884325944855,1.15745532278223,1.23625770240992,1.47198920134397,1.02860775715625,1.59728225543404,1.90748951957857,1.59881058295561,1.59985946706062,2.5384382367503,1.82927972872773,1.57841826862706,1.90125759384206,1.12228454331548,1.42362021749009,1.77308068276014,2.04615521584845,2.47898945897546,2.3148793317737,0.999242311751784,1.87145286756327,1.50409737833809,2.86932498103265,3.08827986767322,0.927471342481686
|short_description=p1@Sh3kbp1
}}
}}

Latest revision as of 17:34, 1 October 2015

Short description:p1@Sh3kbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh3kbp1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_ENSMUST00000080394, ENSMUST00000141354, NM_021389, uc009usv.2, uc009usw.2, uc012hrf.1_5end
EntrezGene:Sh3kbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh3kbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9132.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7100.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2113.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E634.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.22
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4204.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8193.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A261.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A466.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A238.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9188.59
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1195.94
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H9167.01
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B110.16
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G221.36
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H121.60
spleen, neonate N25.CNhs11099.1354-25G317.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B588.80
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C515.72
thymus, embryo E17.CNhs10581.478-18C123.45
thymus, embryo E18.CNhs10595.1273-19G441.92
thymus, neonate N02.CNhs11181.1541-43F852.89
thymus, neonate N03.CNhs11137.2104-43C755.53
thymus, neonate N06.CNhs11197.681-26C462.09
thymus, neonate N07.CNhs11211.713-19D350.22
thymus, neonate N10.CNhs11194.748-24E463.92
thymus, neonate N20.CNhs11186.820-7A284.30
thymus, neonate N25.CNhs11125.1362-25G787.07
thymus, neonate N30.CNhs11132.1393-42G293.38
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:156146525..156146544,%2B&oldid=4314203"