Personal tools

FFCP PHASE1:Mm9::chrX:156064971..156065008,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=58194
|EntrezGene=58194
|HGNC=
|HGNC=
|MCL_coexpression_id=1780
|TSSclassifier=NA
|UniProt=Q8R550
|UniProt=Q8R550
|association_with_transcript=-195bp_to_ENSMUST00000112456_5end
|association_with_transcript=-195bp_to_ENSMUST00000112456_5end
|cluster_id=chrX:156064971..156065008,+
|description=CAGE_peak_21_at_Sh3kbp1_5end
|description=CAGE_peak_21_at_Sh3kbp1_5end
|id=chrX:156064971..156065008,+
|id=chrX:156064971..156065008,+
|ontology_enrichment_celltype=CL:0000117!4.72e-14!23;CL:0000337!4.72e-14!23;CL:0000540!1.00e-09!33;CL:0000047!1.00e-09!33;CL:0000031!1.00e-09!33;CL:0000404!1.00e-09!33;CL:0000393!1.19e-07!39;CL:0000211!1.19e-07!39
|ontology_enrichment_celltype=CL:0000117!4.72e-14!23;CL:0000337!4.72e-14!23;CL:0000540!1.00e-09!33;CL:0000047!1.00e-09!33;CL:0000031!1.00e-09!33;CL:0000404!1.00e-09!33;CL:0000393!1.19e-07!39;CL:0000211!1.19e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-27,23;CL:0000337,5.96e-27,23;CL:0000540,2.44e-17,33;CL:0000047,2.44e-17,33;CL:0000031,2.44e-17,33;CL:0000404,2.44e-17,33;CL:0000393,5.95e-14,39;CL:0000211,5.95e-14,39;CL:0002609,6.90e-13,6;CL:0002319,3.16e-12,43;CL:0000221,7.61e-12,44;CL:0000133,7.61e-12,44;CL:0002612,7.66e-08,3;CL:0002608,2.63e-07,3;CL:0002613,2.63e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!3.53e-15!34;UBERON:0001049!7.65e-12!52;UBERON:0005068!7.65e-12!52;UBERON:0006241!7.65e-12!52;UBERON:0007135!7.65e-12!52;UBERON:0000153!1.19e-11!94;UBERON:0002791!2.18e-11!29;UBERON:0003528!2.18e-11!29;UBERON:0001893!2.18e-11!29;UBERON:0001017!3.35e-11!73;UBERON:0005743!3.35e-11!73;UBERON:0002780!3.43e-11!39;UBERON:0001890!3.43e-11!39;UBERON:0006240!3.43e-11!39;UBERON:0003080!3.45e-11!40;UBERON:0000073!8.43e-11!75;UBERON:0001016!8.43e-11!75;UBERON:0007811!9.75e-11!86;UBERON:0000955!1.10e-10!50;UBERON:0006238!1.10e-10!50;UBERON:0003056!1.22e-10!49;UBERON:0002616!2.65e-10!49;UBERON:0000033!8.87e-09!63;UBERON:0000956!9.50e-09!21;UBERON:0001869!9.50e-09!21;UBERON:0000203!9.50e-09!21;UBERON:0002346!1.60e-08!71;UBERON:0003075!1.60e-08!71;UBERON:0007284!1.60e-08!71;UBERON:0004121!1.02e-07!102;UBERON:0000924!1.02e-07!102;UBERON:0006601!1.02e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-29,34;UBERON:0003528,1.91e-20,29;UBERON:0002791,1.91e-20,29;UBERON:0001893,1.91e-20,29;UBERON:0000073,1.51e-19,54;UBERON:0001049,6.96e-19,52;UBERON:0005068,6.96e-19,52;UBERON:0006241,6.96e-19,52;UBERON:0007135,6.96e-19,52;UBERON:0000956,2.94e-17,21;UBERON:0001869,2.94e-17,21;UBERON:0000203,2.94e-17,21;UBERON:0001017,7.82e-17,73;UBERON:0001016,3.40e-16,75;UBERON:0002780,1.17e-15,39;UBERON:0001890,1.17e-15,39;UBERON:0006240,1.17e-15,39;UBERON:0003080,3.82e-15,40;UBERON:0002346,3.60e-14,64;UBERON:0003075,3.60e-14,64;UBERON:0007284,3.60e-14,64;UBERON:0002619,2.71e-13,17;UBERON:0002616,1.56e-12,46;UBERON:0000955,3.64e-12,47;UBERON:0006238,3.64e-12,47;UBERON:0001948,7.38e-12,5;UBERON:0002315,7.38e-12,5;UBERON:0010371,1.15e-11,73;UBERON:0003056,1.79e-11,49;UBERON:0004121,2.63e-11,95;UBERON:0000924,2.63e-11,95;UBERON:0006601,2.63e-11,95;UBERON:0002240,8.61e-10,6;UBERON:0005174,8.61e-10,6;UBERON:0001137,8.61e-10,6;UBERON:0002021,1.82e-09,10;UBERON:0000411,1.82e-09,10;UBERON:0001950,1.82e-09,10;UBERON:0010314,5.02e-08,92;UBERON:0002257,7.66e-08,3;UBERON:0000369,1.43e-07,5;UBERON:0002435,1.43e-07,5;UBERON:0000204,1.43e-07,5;UBERON:0010082,1.43e-07,5;UBERON:0011216,9.47e-07,194
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23706337375356,1.05798195854407,1.90149421051854,0,0,0,0,0.7104801149461,0,0,2.7996195323289,2.56511282830212,1.89292465216244,3.42781181284564,2.65042249141936,1.71487118900936,2.77951865952885,3.67687514644008,1.10115880999389,0.766124028511126,0.307213066512487,2.50583946687368,2.28719109006024,2.6045668527838,0,0.56276261003168,0.15279824777681,5.89257170947335,3.55929201997757,2.98239113320481,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.359445373517761,0,0,0.149790639404823,0.457500602818626,10.0523481690292,0.521472960576829,2.04572365864264,0,1.29793010454206,0.203678727700633,0,0,0,0.130120442962704,0,0.360124259610698,0.150704817835715,0.272145996605311,0.512454881139399,0.562210347358373,0,0.215567992932842,0.756424320671277,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.841159794256509,7.10041825417063,0,0,0,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0,0,0,0.642642632843614,0,0,0.651547837414304,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,1.01987057996313,0.139951452323658,0.967399816630967,0,0.632671987162271,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.337912250981556,0.117357238645754,0.651021924219751,0.209718688851422,0,0.288030006257865,0.316011120628178,0,0.410843828659309,0.129920822977795,1.25318686967237,1.19208812868759,0.841368146639782,1.32920574457119,1.51449674922221,2.28620419965,2.11734988787365,2.14407337627455,1.15454209968395,1.5193997283604,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,6.30185064783336,2.23409137046794,0,0,2.02506750069542,0.900642406448441,1.35942722695261,2.07104124700728,0.103787347584177,0,0.512200817262403,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0,0.962757628775446,1.51618327058278,1.01391719956096,0.565879024158229,0.655490552289177,0.576226371643824,0.402048282689293,1.42888107384922,0.463537303779422,0.192909220463705,1.23625770240992,0.588795680537589,1.37147700954166,0.70990322463735,0.715308569841963,0.581385666529314,0.846984423737976,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,0,0.474540072496697,1.0835493061312,0.409231043169689,0.309873682371932,0.964533054905707,0.999242311751784,0.701794825336225,0.644613162144895,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23706337375356,1.05798195854407,1.90149421051854,0,0,0,0,0.7104801149461,0,0,2.7996195323289,2.56511282830212,1.89292465216244,3.42781181284564,2.65042249141936,1.71487118900936,2.77951865952885,3.67687514644008,1.10115880999389,0.766124028511126,0.307213066512487,2.50583946687368,2.28719109006024,2.6045668527838,0,0.56276261003168,0.15279824777681,5.89257170947335,3.55929201997757,2.98239113320481,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.359445373517761,0,0,0.149790639404823,0.457500602818626,10.0523481690292,0.521472960576829,2.04572365864264,0,1.29793010454206,0.203678727700633,0,0,0,0.130120442962704,0,0.360124259610698,0.150704817835715,0.272145996605311,0.512454881139399,0.562210347358373,0,0.215567992932842,0.756424320671277,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.841159794256509,7.10041825417063,0,0,0,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0,0,0,0.642642632843614,0,0,0.651547837414304,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,1.01987057996313,0.139951452323658,0.967399816630967,0,0.632671987162271,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.337912250981556,0.117357238645754,0.651021924219751,0.209718688851422,0,0.288030006257865,0.316011120628178,0,0.410843828659309,0.129920822977795,1.25318686967237,1.19208812868759,0.841368146639782,1.32920574457119,1.51449674922221,2.28620419965,2.11734988787365,2.14407337627455,1.15454209968395,1.5193997283604,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,6.30185064783336,2.23409137046794,0,0,2.02506750069542,0.900642406448441,1.35942722695261,2.07104124700728,0.103787347584177,0,0.512200817262403,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0,0.962757628775446,1.51618327058278,1.01391719956096,0.565879024158229,0.655490552289177,0.576226371643824,0.402048282689293,1.42888107384922,0.463537303779422,0.192909220463705,1.23625770240992,0.588795680537589,1.37147700954166,0.70990322463735,0.715308569841963,0.581385666529314,0.846984423737976,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,0,0.474540072496697,1.0835493061312,0.409231043169689,0.309873682371932,0.964533054905707,0.999242311751784,0.701794825336225,0.644613162144895,0,0,0
|short_description=p21@Sh3kbp1
|short_description=p21@Sh3kbp1
}}
}}

Latest revision as of 17:29, 1 October 2015

Short description:p21@Sh3kbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_21_at_Sh3kbp1_5end
Coexpression cluster:MCL_coexpression_mm9:1780
Association with transcript: -195bp_to_ENSMUST00000112456_5end
EntrezGene:Sh3kbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p21@Sh3kbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F110.05
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.25e-2934
brain grey matter1.91e-2029
regional part of telencephalon1.91e-2029
telencephalon1.91e-2029
regional part of nervous system1.51e-1954
neural tube6.96e-1952
neural rod6.96e-1952
future spinal cord6.96e-1952
neural keel6.96e-1952
cerebral cortex2.94e-1721
cerebral hemisphere2.94e-1721
pallium2.94e-1721
central nervous system7.82e-1773
nervous system3.40e-1675
regional part of forebrain1.17e-1539
forebrain1.17e-1539
future forebrain1.17e-1539
anterior neural tube3.82e-1540
neurectoderm3.60e-1464
neural plate3.60e-1464
presumptive neural plate3.60e-1464
regional part of cerebral cortex2.71e-1317
regional part of brain1.56e-1246
brain3.64e-1247
future brain3.64e-1247
regional part of spinal cord7.38e-125
gray matter of spinal cord7.38e-125
ecto-epithelium1.15e-1173
pre-chordal neural plate1.79e-1149
ectoderm-derived structure2.63e-1195
ectoderm2.63e-1195
presumptive ectoderm2.63e-1195
spinal cord8.61e-106
dorsal region element8.61e-106
dorsum8.61e-106
occipital lobe1.82e-0910
visual cortex1.82e-0910
neocortex1.82e-0910
structure with developmental contribution from neural crest5.02e-0892
ventral horn of spinal cord7.66e-083
corpus striatum1.43e-075
striatum1.43e-075
ventral part of telencephalon1.43e-075
future corpus striatum1.43e-075
organ system subdivision9.47e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:156064971..156065008,%2B&oldid=4314049"