FFCP PHASE1:Mm9::chr1:87546602..87546617,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20684 | |EntrezGene=20684 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=698 | |MCL_coexpression_id=698 | ||
|TSSclassifier=NA | |||
|UniProt=F8WHM2,Q8C405,Q3U5P2,Q8BNW8,Q6NTA3 | |UniProt=F8WHM2,Q8C405,Q3U5P2,Q8BNW8,Q6NTA3 | ||
|association_with_transcript=-7bp_to_ENSMUST00000027424,ENSMUST00000066427,ENSMUST00000097667,ENSMUST00000170314,NM_013673,uc007bud.1,uc007bue.1,uc007buf.1,uc007bug.1,uc007buh.1,uc011woc.1_5end | |association_with_transcript=-7bp_to_ENSMUST00000027424,ENSMUST00000066427,ENSMUST00000097667,ENSMUST00000170314,NM_013673,uc007bud.1,uc007bue.1,uc007buf.1,uc007bug.1,uc007buh.1,uc011woc.1_5end | ||
|cluster_id=chr1:87546602..87546617,+ | |||
|description=CAGE_peak_2_at_Sp100_5end | |description=CAGE_peak_2_at_Sp100_5end | ||
|id=chr1:87546602..87546617,+ | |id=chr1:87546602..87546617,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.35e-07!32;CL:0002032!2.35e-07!32;CL:0000037!2.35e-07!32;CL:0000566!2.35e-07!32;CL:0000837!2.35e-07!32;CL:0002031!4.35e-07!25;CL:0000838!9.10e-07!12 | |ontology_enrichment_celltype=CL:0000988!2.35e-07!32;CL:0002032!2.35e-07!32;CL:0000037!2.35e-07!32;CL:0000566!2.35e-07!32;CL:0000837!2.35e-07!32;CL:0002031!4.35e-07!25;CL:0000838!9.10e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.40e-10,25;CL:0000988,4.40e-09,32;CL:0002032,4.40e-09,32;CL:0000037,4.40e-09,32;CL:0000837,4.40e-09,32;CL:0002320,5.31e-08,46;CL:0000134,5.31e-08,46;CL:0000838,6.56e-08,12;CL:0000738,1.71e-07,17;CL:0002087,1.71e-07,17;CL:0000542,4.04e-07,13;CL:0000051,4.04e-07,13;CL:0000791,8.13e-07,9;CL:0000789,8.13e-07,9;CL:0002420,8.13e-07,9;CL:0002419,8.13e-07,9;CL:0000790,8.13e-07,9;CL:0000084,9.11e-07,11;CL:0000827,9.11e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.42e-15!48;UBERON:0002390!2.48e-13!45;UBERON:0003061!2.48e-13!45;UBERON:0002405!3.44e-13!70;UBERON:0003081!5.59e-10!88;UBERON:0004177!8.52e-10!29;UBERON:0000926!3.07e-09!193;UBERON:0004120!3.07e-09!193;UBERON:0006603!3.07e-09!193;UBERON:0003104!4.41e-08!131;UBERON:0009142!4.41e-08!131;UBERON:0005057!4.90e-08!51;UBERON:0003408!5.38e-08!24;UBERON:0002370!2.12e-07!23;UBERON:0000974!2.12e-07!23;UBERON:0004807!2.12e-07!23;UBERON:0005058!2.12e-07!23;UBERON:0003351!2.12e-07!23;UBERON:0009113!2.12e-07!23;UBERON:0003295!2.12e-07!23;UBERON:0009722!2.12e-07!23;UBERON:0005562!2.12e-07!23;UBERON:0007690!2.12e-07!23;UBERON:0004119!2.14e-07!130;UBERON:0000925!2.14e-07!130;UBERON:0006595!2.14e-07!130;UBERON:0000077!2.85e-07!97;UBERON:0006562!2.96e-07!24;UBERON:0001557!2.96e-07!24;UBERON:0001042!2.96e-07!24;UBERON:0008814!2.96e-07!24;UBERON:0009145!2.96e-07!24;UBERON:0001007!3.94e-07!128;UBERON:0001555!3.94e-07!128;UBERON:0007026!3.94e-07!128;UBERON:0005911!5.90e-07!69 | |ontology_enrichment_uberon=UBERON:0002193!5.42e-15!48;UBERON:0002390!2.48e-13!45;UBERON:0003061!2.48e-13!45;UBERON:0002405!3.44e-13!70;UBERON:0003081!5.59e-10!88;UBERON:0004177!8.52e-10!29;UBERON:0000926!3.07e-09!193;UBERON:0004120!3.07e-09!193;UBERON:0006603!3.07e-09!193;UBERON:0003104!4.41e-08!131;UBERON:0009142!4.41e-08!131;UBERON:0005057!4.90e-08!51;UBERON:0003408!5.38e-08!24;UBERON:0002370!2.12e-07!23;UBERON:0000974!2.12e-07!23;UBERON:0004807!2.12e-07!23;UBERON:0005058!2.12e-07!23;UBERON:0003351!2.12e-07!23;UBERON:0009113!2.12e-07!23;UBERON:0003295!2.12e-07!23;UBERON:0009722!2.12e-07!23;UBERON:0005562!2.12e-07!23;UBERON:0007690!2.12e-07!23;UBERON:0004119!2.14e-07!130;UBERON:0000925!2.14e-07!130;UBERON:0006595!2.14e-07!130;UBERON:0000077!2.85e-07!97;UBERON:0006562!2.96e-07!24;UBERON:0001557!2.96e-07!24;UBERON:0001042!2.96e-07!24;UBERON:0008814!2.96e-07!24;UBERON:0009145!2.96e-07!24;UBERON:0001007!3.94e-07!128;UBERON:0001555!3.94e-07!128;UBERON:0007026!3.94e-07!128;UBERON:0005911!5.90e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.49e-21,48;UBERON:0002405,3.49e-21,48;UBERON:0002390,2.09e-18,45;UBERON:0003061,2.09e-18,45;UBERON:0000077,1.14e-14,35;UBERON:0004177,4.39e-13,29;UBERON:0005057,4.39e-13,29;UBERON:0003408,1.99e-10,24;UBERON:0003081,4.17e-10,87;UBERON:0000926,4.99e-10,120;UBERON:0004120,4.99e-10,120;UBERON:0006603,4.99e-10,120;UBERON:0002370,1.86e-09,23;UBERON:0000974,1.86e-09,23;UBERON:0004807,1.86e-09,23;UBERON:0005058,1.86e-09,23;UBERON:0003351,1.86e-09,23;UBERON:0009113,1.86e-09,23;UBERON:0003295,1.86e-09,23;UBERON:0009722,1.86e-09,23;UBERON:0005562,1.86e-09,23;UBERON:0007690,1.86e-09,23;UBERON:0006562,7.03e-09,24;UBERON:0001557,7.03e-09,24;UBERON:0001042,7.03e-09,24;UBERON:0008814,7.03e-09,24;UBERON:0009145,7.03e-09,24;UBERON:0001004,1.03e-08,42;UBERON:0002384,5.31e-08,46;UBERON:0000065,5.98e-08,41;UBERON:0000072,2.03e-07,27 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,2.50447864973174,0.16787927191189,0.233612640595526,10.4589891987677,0.563154888606667,2.34064526321993,1.19852577757853,0.558405112967355,14.3808613142213,12.4136971434976,2.99798785634096,7.89653542820321,0.699561878128147,19.2431920868525,16.1795031654772,8.91218268775863,0.680346321208558,0.397163804803541,2.08959831311148,1.59992422793407,1.83527424853736,0,1.29228598847722,0.646413698057667,0.380046838912748,0.504060259519861,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,4.71171369576418,3.52938892818609,4.09827290975067,3.88408282424923,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0,0,0.139986421625363,0,15.1004345451963,5.07753499407941,12.0993767691287,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,10.4351215932604,1.72084775396277,0,0,0,0.896053774194671,0.983110940922263,0.170430322578058,0,0,0,0,0,0,0,0,0,0.91347103775248,30.2957323867191,1.1875371125186,0,0,0,0,0.23517741427141,0.628332956648377,0.741584903203122,2.60278842455841,7.96149496754887,0.323533699894818,1.10420759230197,0.969750506270444,0,0,0,1.78819938646014,0.599075622529601,0.599902730993408,1.27070227073065,0,0.457500602818626,0,0.173824320192276,0,0,0,0.203678727700633,2.23932547098167,0.505445516867349,0.841767423545896,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,1.13665399758237,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,1.13496333364198,0.730999937126662,2.41505126820156,0.939444931322602,0.210289948564127,0,2.31293148088659,0.528901133327089,0.213288250535234,0,0,0,0,0.380451252225118,0.949058123089023,0,0,0.596869416123452,0.38992817423824,0,1.29682829924817,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.758838445491087,1.18088118383682,0.941992367048249,0.740382983530803,0.592905254174298,0,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0.274561413188081,1.43768206527355,1.48856379067401,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,4.0645701836653,0,0,0,0,0.335012514883631,0.476087281772027,0.975668239288994,1.10344600874334,1.7717175171902,0.478364305972461,1.96635977658886,1.03610989119537,2.60368305446721,1.50791283939272,8.15858525728064,0.491764273019036,1.10374698521893,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,1.41940085208269,0.35613120733451,0,1.15479086080775,0,0,0,0.188605079755898,0,0.922305443831782,1.29214146584111,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0.304464949114599,0.704015124191131,0.42366414172764,1.32317038832977,0.98931751764888,0.161464426695906,0.120625849856312,0,0.328281799490123,0.582961673259701,0.556275906031529,2.9048049735635,0.206386867963223,1.48155621895769,2.63715839806567,3.2806614653046,4.80434163733698,0.679913719975421,1.11961161858926,0.967399816630967,0.954670618015114,0,0.609958401380546,0,0,0.655087691238533,0.269728692769641,0.247960367176008,0,0,7.45607175704311,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,8.21628913633263,0.202725215290164,0.616265742988964,0.77952493786677,1.43221356533985,2.78153896693771,2.64429988943931,3.39685912501528,4.03865799792591,2.89585865288999,4.2346997757473,4.87289403698762,4.71438024037614,6.07759891344159,0.226730383615211,0,0,0,1.15913756419314,1.12609485270709,1.28206136987086,1.07184189539533,0.501572104035363,1.12950368523413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0,0,0,0.824171801606613,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0.701794825336225,0.214871054048298,0.382576664137687,0,0.927471342481686 | |phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,2.50447864973174,0.16787927191189,0.233612640595526,10.4589891987677,0.563154888606667,2.34064526321993,1.19852577757853,0.558405112967355,14.3808613142213,12.4136971434976,2.99798785634096,7.89653542820321,0.699561878128147,19.2431920868525,16.1795031654772,8.91218268775863,0.680346321208558,0.397163804803541,2.08959831311148,1.59992422793407,1.83527424853736,0,1.29228598847722,0.646413698057667,0.380046838912748,0.504060259519861,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,4.71171369576418,3.52938892818609,4.09827290975067,3.88408282424923,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0,0,0.139986421625363,0,15.1004345451963,5.07753499407941,12.0993767691287,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,10.4351215932604,1.72084775396277,0,0,0,0.896053774194671,0.983110940922263,0.170430322578058,0,0,0,0,0,0,0,0,0,0.91347103775248,30.2957323867191,1.1875371125186,0,0,0,0,0.23517741427141,0.628332956648377,0.741584903203122,2.60278842455841,7.96149496754887,0.323533699894818,1.10420759230197,0.969750506270444,0,0,0,1.78819938646014,0.599075622529601,0.599902730993408,1.27070227073065,0,0.457500602818626,0,0.173824320192276,0,0,0,0.203678727700633,2.23932547098167,0.505445516867349,0.841767423545896,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,1.13665399758237,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,1.13496333364198,0.730999937126662,2.41505126820156,0.939444931322602,0.210289948564127,0,2.31293148088659,0.528901133327089,0.213288250535234,0,0,0,0,0.380451252225118,0.949058123089023,0,0,0.596869416123452,0.38992817423824,0,1.29682829924817,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.758838445491087,1.18088118383682,0.941992367048249,0.740382983530803,0.592905254174298,0,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0.274561413188081,1.43768206527355,1.48856379067401,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,4.0645701836653,0,0,0,0,0.335012514883631,0.476087281772027,0.975668239288994,1.10344600874334,1.7717175171902,0.478364305972461,1.96635977658886,1.03610989119537,2.60368305446721,1.50791283939272,8.15858525728064,0.491764273019036,1.10374698521893,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,1.41940085208269,0.35613120733451,0,1.15479086080775,0,0,0,0.188605079755898,0,0.922305443831782,1.29214146584111,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0.304464949114599,0.704015124191131,0.42366414172764,1.32317038832977,0.98931751764888,0.161464426695906,0.120625849856312,0,0.328281799490123,0.582961673259701,0.556275906031529,2.9048049735635,0.206386867963223,1.48155621895769,2.63715839806567,3.2806614653046,4.80434163733698,0.679913719975421,1.11961161858926,0.967399816630967,0.954670618015114,0,0.609958401380546,0,0,0.655087691238533,0.269728692769641,0.247960367176008,0,0,7.45607175704311,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,8.21628913633263,0.202725215290164,0.616265742988964,0.77952493786677,1.43221356533985,2.78153896693771,2.64429988943931,3.39685912501528,4.03865799792591,2.89585865288999,4.2346997757473,4.87289403698762,4.71438024037614,6.07759891344159,0.226730383615211,0,0,0,1.15913756419314,1.12609485270709,1.28206136987086,1.07184189539533,0.501572104035363,1.12950368523413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0,0,0,0.824171801606613,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0.701794825336225,0.214871054048298,0.382576664137687,0,0.927471342481686 | ||
|short_description=p2@Sp100 | |short_description=p2@Sp100 | ||
}} | }} |
Latest revision as of 17:10, 1 October 2015
Short description: | p2@Sp100 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sp100_5end |
Coexpression cluster: | MCL_coexpression_mm9:698 |
Association with transcript: | -7bp_to_ENSMUST00000027424, ENSMUST00000066427, ENSMUST00000097667, ENSMUST00000170314, NM_013673, uc007bud.1, uc007bue.1, uc007buf.1, uc007bug.1, uc007buh.1, uc011woc.1_5end |
EntrezGene: | Sp100 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.40e-10 | 25 |
hematopoietic cell | 4.40e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.40e-09 | 32 |
hematopoietic stem cell | 4.40e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.40e-09 | 32 |
connective tissue cell | 5.31e-08 | 46 |
mesenchymal cell | 5.31e-08 | 46 |
lymphoid lineage restricted progenitor cell | 6.56e-08 | 12 |
leukocyte | 1.71e-07 | 17 |
nongranular leukocyte | 1.71e-07 | 17 |
lymphocyte | 4.04e-07 | 13 |
common lymphoid progenitor | 4.04e-07 | 13 |
mature alpha-beta T cell | 8.13e-07 | 9 |
alpha-beta T cell | 8.13e-07 | 9 |
immature T cell | 8.13e-07 | 9 |
mature T cell | 8.13e-07 | 9 |
immature alpha-beta T cell | 8.13e-07 | 9 |
T cell | 9.11e-07 | 11 |
pro-T cell | 9.11e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.49e-21 | 48 |
immune system | 3.49e-21 | 48 |
hematopoietic system | 2.09e-18 | 45 |
blood island | 2.09e-18 | 45 |
mixed endoderm/mesoderm-derived structure | 1.14e-14 | 35 |
hemopoietic organ | 4.39e-13 | 29 |
immune organ | 4.39e-13 | 29 |
gland of gut | 1.99e-10 | 24 |
lateral plate mesoderm | 4.17e-10 | 87 |
mesoderm | 4.99e-10 | 120 |
mesoderm-derived structure | 4.99e-10 | 120 |
presumptive mesoderm | 4.99e-10 | 120 |
thymus | 1.86e-09 | 23 |
neck | 1.86e-09 | 23 |
respiratory system epithelium | 1.86e-09 | 23 |
hemolymphoid system gland | 1.86e-09 | 23 |
pharyngeal epithelium | 1.86e-09 | 23 |
thymic region | 1.86e-09 | 23 |
pharyngeal gland | 1.86e-09 | 23 |
entire pharyngeal arch endoderm | 1.86e-09 | 23 |
thymus primordium | 1.86e-09 | 23 |
early pharyngeal endoderm | 1.86e-09 | 23 |
pharynx | 7.03e-09 | 24 |
upper respiratory tract | 7.03e-09 | 24 |
chordate pharynx | 7.03e-09 | 24 |
pharyngeal arch system | 7.03e-09 | 24 |
pharyngeal region of foregut | 7.03e-09 | 24 |
respiratory system | 1.03e-08 | 42 |
connective tissue | 5.31e-08 | 46 |
respiratory tract | 5.98e-08 | 41 |
segment of respiratory tract | 2.03e-07 | 27 |