FFCP PHASE1:Mm9::chr16:17147668..17147685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76872 | |EntrezGene=76872 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q80X53 | |UniProt=Q80X53 | ||
|association_with_transcript=-346bp_to_ENSMUST00000023452_5end | |association_with_transcript=-346bp_to_ENSMUST00000023452_5end | ||
|cluster_id=chr16:17147668..17147685,- | |||
|description=CAGE_peak_2_at_Ccdc116_5end | |description=CAGE_peak_2_at_Ccdc116_5end | ||
|id=chr16:17147668..17147685,- | |id=chr16:17147668..17147685,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.62e-11,9;CL:0002251,4.62e-11,9;CL:0000239,1.55e-08,6;CL:0000677,1.55e-08,6;CL:0000584,1.55e-08,6;CL:0000075,3.91e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.73e-22!59;UBERON:0000160!3.43e-19!43;UBERON:0000344!3.63e-10!15;UBERON:0001007!2.01e-09!128;UBERON:0001555!2.01e-09!128;UBERON:0007026!2.01e-09!128;UBERON:0004119!2.19e-09!130;UBERON:0000925!2.19e-09!130;UBERON:0006595!2.19e-09!130;UBERON:0001242!6.98e-09!13;UBERON:0000060!6.98e-09!13;UBERON:0001262!6.98e-09!13;UBERON:0004786!6.98e-09!13;UBERON:0004923!1.12e-08!24;UBERON:0004921!1.42e-08!126;UBERON:0004185!1.42e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.19e-32,47;UBERON:0000160,1.88e-31,31;UBERON:0000344,4.73e-18,15;UBERON:0001242,1.37e-15,13;UBERON:0001262,1.37e-15,13;UBERON:0004786,1.37e-15,13;UBERON:0003350,4.62e-11,9;UBERON:0004808,4.62e-11,9;UBERON:0001277,4.62e-11,9;UBERON:0004923,7.67e-11,24;UBERON:0001007,4.49e-10,116;UBERON:0001555,4.49e-10,116;UBERON:0007026,4.49e-10,116;UBERON:0004119,1.08e-09,118;UBERON:0000925,1.08e-09,118;UBERON:0006595,1.08e-09,118;UBERON:0004921,8.11e-09,114;UBERON:0000485,1.29e-08,11 | |||
|phase1_expression=0.320297694209588,5.23463111459042,5.0049916332849,12.40103266358,18.0322462780685,3.86122325397347,4.20502753071946,0.774739940649458,2.25261955442667,2.10658073689794,0.856089841127525,2.15384829287408,0.684802919724823,0.437102012094987,0.333109761815663,0,0,0.788655413395594,1.09691546884591,0.84877930359606,0.935476191661768,0,0,5.27974995218242,7.34109699414944,2.8711598205751,6.03066794622705,4.09395342103189,9.31114755336232,3.52842181663903,3.76941868114018,15.2407361630311,8.61090702618398,0,2.59966457776147,2.65975432573588,2.04169356262369,0.837063261473815,0,0,0.588231488031014,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,0,0,0,0.515672092277442,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.285650984403804,1.54607978666129,0.489963196859816,0,0,0,0.766124028511126,0.153606533256243,1.05509030184155,1.09785172322892,1.04182674111352,0.279182999001381,0,0.916789486660861,1.76777151284201,1.13897344639282,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0.506719730950197,0,1.94112595522402,0.517875767294343,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.251333182659351,1.97755974187499,0,0,0.647067399789637,0.220841518460394,0,13.0474232852686,0.292780797011547,0.209446706813455,7.91916871146633,0.359445373517761,0,0.508280908292259,1.49790639404823,0.457500602818626,1.13088916901578,0.347648640384553,0.255715457330331,0.62336413367868,0.648965052271031,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0.340182495756639,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,6.27795687669216,6.61126416658861,0,0,2.06187938115349,4.23535401709019,4.00280478920767,4.75564065281398,6.16887780007865,2.79988223030818,6.53471542880701,6.16765063327568,5.06906626509712,7.19055526923377,3.24207074812041,5.17767310461355,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.589676985339609,0,0,0.482354319504834,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0.283880170416537,0.178065603667255,0,0.164970122972535,1.32745138339963,0.728341908464944,1.51161778482376,2.64047111658257,2.36241514304618,4.30409207121498,2.84271122485043,0.727067458955011,1.06949213515416,1.8962205476149,1.05418608574999,0,0.680879211507576,0,0.517434735131018,0,0,0.356737635204141,0.329098041204242,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0.984845398470368,3.78925087618806,0.18542530201051,0.854354403989263,0.619160603889667,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,0.509935289981566,0.69975726161829,0.414599921413271,1.90934123603023,0.316335993581135,1.21991680276109,1.08005340821801,1.25452977608681,2.62035076495413,2.42755823492677,3.38879168473877,1.57053565190418,8.68420321055012,0.621339313086926,6.20062232552609,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0.209718688851422,2.17425708743405,1.72818003754719,0.316011120628178,0.608175645870493,0.513554785824136,0.77952493786677,0.358053391334963,0,0.721172697119813,0.590758108698309,0.302899349844443,0.609654453239999,0.504130925684203,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0.443971906748129,0.897138566094757,1.00730769818447,1.9318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,0.320125762024346,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.619747364743864,0,1.24905288968973,0.467863216890817,0.644613162144895,0,0,0 | |phase1_expression=0.320297694209588,5.23463111459042,5.0049916332849,12.40103266358,18.0322462780685,3.86122325397347,4.20502753071946,0.774739940649458,2.25261955442667,2.10658073689794,0.856089841127525,2.15384829287408,0.684802919724823,0.437102012094987,0.333109761815663,0,0,0.788655413395594,1.09691546884591,0.84877930359606,0.935476191661768,0,0,5.27974995218242,7.34109699414944,2.8711598205751,6.03066794622705,4.09395342103189,9.31114755336232,3.52842181663903,3.76941868114018,15.2407361630311,8.61090702618398,0,2.59966457776147,2.65975432573588,2.04169356262369,0.837063261473815,0,0,0.588231488031014,0.683045484958446,1.94204141212461,0,0,0,0,0,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,0,0,0,0.515672092277442,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.285650984403804,1.54607978666129,0.489963196859816,0,0,0,0.766124028511126,0.153606533256243,1.05509030184155,1.09785172322892,1.04182674111352,0.279182999001381,0,0.916789486660861,1.76777151284201,1.13897344639282,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0.506719730950197,0,1.94112595522402,0.517875767294343,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.251333182659351,1.97755974187499,0,0,0.647067399789637,0.220841518460394,0,13.0474232852686,0.292780797011547,0.209446706813455,7.91916871146633,0.359445373517761,0,0.508280908292259,1.49790639404823,0.457500602818626,1.13088916901578,0.347648640384553,0.255715457330331,0.62336413367868,0.648965052271031,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0.340182495756639,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,6.27795687669216,6.61126416658861,0,0,2.06187938115349,4.23535401709019,4.00280478920767,4.75564065281398,6.16887780007865,2.79988223030818,6.53471542880701,6.16765063327568,5.06906626509712,7.19055526923377,3.24207074812041,5.17767310461355,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.589676985339609,0,0,0.482354319504834,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0.283880170416537,0.178065603667255,0,0.164970122972535,1.32745138339963,0.728341908464944,1.51161778482376,2.64047111658257,2.36241514304618,4.30409207121498,2.84271122485043,0.727067458955011,1.06949213515416,1.8962205476149,1.05418608574999,0,0.680879211507576,0,0.517434735131018,0,0,0.356737635204141,0.329098041204242,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0.984845398470368,3.78925087618806,0.18542530201051,0.854354403989263,0.619160603889667,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,0.509935289981566,0.69975726161829,0.414599921413271,1.90934123603023,0.316335993581135,1.21991680276109,1.08005340821801,1.25452977608681,2.62035076495413,2.42755823492677,3.38879168473877,1.57053565190418,8.68420321055012,0.621339313086926,6.20062232552609,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0.209718688851422,2.17425708743405,1.72818003754719,0.316011120628178,0.608175645870493,0.513554785824136,0.77952493786677,0.358053391334963,0,0.721172697119813,0.590758108698309,0.302899349844443,0.609654453239999,0.504130925684203,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0.443971906748129,0.897138566094757,1.00730769818447,1.9318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,0.320125762024346,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.619747364743864,0,1.24905288968973,0.467863216890817,0.644613162144895,0,0,0 | ||
|short_description=p2@Ccdc116 | |short_description=p2@Ccdc116 | ||
}} | }} |
Latest revision as of 16:28, 1 October 2015
Short description: | p2@Ccdc116 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc116_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -346bp_to_ENSMUST00000023452_5end |
EntrezGene: | Ccdc116 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.62e-11 | 9 |
epithelial cell of alimentary canal | 4.62e-11 | 9 |
brush border epithelial cell | 1.55e-08 | 6 |
gut absorptive cell | 1.55e-08 | 6 |
enterocyte | 1.55e-08 | 6 |
columnar/cuboidal epithelial cell | 3.91e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.19e-32 | 47 |
intestine | 1.88e-31 | 31 |
mucosa | 4.73e-18 | 15 |
intestinal mucosa | 1.37e-15 | 13 |
wall of intestine | 1.37e-15 | 13 |
gastrointestinal system mucosa | 1.37e-15 | 13 |
epithelium of mucosa | 4.62e-11 | 9 |
gastrointestinal system epithelium | 4.62e-11 | 9 |
intestinal epithelium | 4.62e-11 | 9 |
organ component layer | 7.67e-11 | 24 |
digestive system | 4.49e-10 | 116 |
digestive tract | 4.49e-10 | 116 |
primitive gut | 4.49e-10 | 116 |
endoderm-derived structure | 1.08e-09 | 118 |
endoderm | 1.08e-09 | 118 |
presumptive endoderm | 1.08e-09 | 118 |
subdivision of digestive tract | 8.11e-09 | 114 |
simple columnar epithelium | 1.29e-08 | 11 |