FFCP PHASE1:Mm9::chr3:13471608..13471635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76897 | |EntrezGene=76897 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BTF8 | |UniProt=Q8BTF8 | ||
|association_with_transcript=-19bp_to_NM_001163328,NM_178631,uc008oqb.2,uc008oqc.2_5end | |association_with_transcript=-19bp_to_NM_001163328,NM_178631,uc008oqb.2,uc008oqc.2_5end | ||
|cluster_id=chr3:13471608..13471635,+ | |||
|description=CAGE_peak_5_at_Ralyl_5end | |description=CAGE_peak_5_at_Ralyl_5end | ||
|id=chr3:13471608..13471635,+ | |id=chr3:13471608..13471635,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.65e-21!33;CL:0000047!4.65e-21!33;CL:0000031!4.65e-21!33;CL:0000404!4.65e-21!33;CL:0000117!3.47e-17!23;CL:0000337!3.47e-17!23;CL:0000393!8.36e-16!39;CL:0000211!8.36e-16!39;CL:0000221!7.26e-15!44;CL:0000133!7.26e-15!44;CL:0002319!9.78e-15!43;CL:0000055!6.28e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.66e-29,33;CL:0000047,2.66e-29,33;CL:0000031,2.66e-29,33;CL:0000404,2.66e-29,33;CL:0000117,2.47e-27,23;CL:0000337,2.47e-27,23;CL:0000393,1.41e-23,39;CL:0000211,1.41e-23,39;CL:0002319,1.18e-20,43;CL:0000221,5.20e-20,44;CL:0000133,5.20e-20,44;CL:0002321,8.02e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.90e-37!75;UBERON:0001016!4.90e-37!75;UBERON:0001017!1.19e-36!73;UBERON:0005743!1.19e-36!73;UBERON:0004121!2.25e-31!102;UBERON:0000924!2.25e-31!102;UBERON:0006601!2.25e-31!102;UBERON:0002346!3.91e-30!71;UBERON:0003075!3.91e-30!71;UBERON:0007284!3.91e-30!71;UBERON:0001049!3.05e-29!52;UBERON:0005068!3.05e-29!52;UBERON:0006241!3.05e-29!52;UBERON:0007135!3.05e-29!52;UBERON:0000033!1.69e-27!63;UBERON:0000955!1.86e-27!50;UBERON:0006238!1.86e-27!50;UBERON:0002616!1.04e-26!49;UBERON:0003056!6.99e-25!49;UBERON:0002020!9.77e-24!34;UBERON:0003080!9.99e-23!40;UBERON:0002780!6.20e-22!39;UBERON:0001890!6.20e-22!39;UBERON:0006240!6.20e-22!39;UBERON:0002791!1.21e-19!29;UBERON:0003528!1.21e-19!29;UBERON:0001893!1.21e-19!29;UBERON:0007811!1.14e-14!86;UBERON:0000956!3.51e-14!21;UBERON:0001869!3.51e-14!21;UBERON:0000203!3.51e-14!21;UBERON:0000153!2.39e-12!94;UBERON:0002619!3.11e-11!17;UBERON:0002021!8.74e-11!10;UBERON:0000411!8.74e-11!10;UBERON:0001950!8.74e-11!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.20e-50,73;UBERON:0001016,2.01e-48,75;UBERON:0000073,1.19e-42,54;UBERON:0002020,4.05e-40,34;UBERON:0001049,1.12e-39,52;UBERON:0005068,1.12e-39,52;UBERON:0006241,1.12e-39,52;UBERON:0007135,1.12e-39,52;UBERON:0004121,1.63e-35,95;UBERON:0000924,1.63e-35,95;UBERON:0006601,1.63e-35,95;UBERON:0002346,9.56e-34,64;UBERON:0003075,9.56e-34,64;UBERON:0007284,9.56e-34,64;UBERON:0003528,8.24e-33,29;UBERON:0002791,8.24e-33,29;UBERON:0001893,8.24e-33,29;UBERON:0000955,2.11e-32,47;UBERON:0006238,2.11e-32,47;UBERON:0002616,3.49e-31,46;UBERON:0010371,3.42e-28,73;UBERON:0003080,1.28e-27,40;UBERON:0002780,2.54e-26,39;UBERON:0001890,2.54e-26,39;UBERON:0006240,2.54e-26,39;UBERON:0000956,4.56e-23,21;UBERON:0001869,4.56e-23,21;UBERON:0000203,4.56e-23,21;UBERON:0003056,5.45e-21,49;UBERON:0010314,4.68e-20,92;UBERON:0002021,5.36e-18,10;UBERON:0000411,5.36e-18,10;UBERON:0001950,5.36e-18,10;UBERON:0002619,7.78e-18,17;UBERON:0000025,2.90e-12,114;UBERON:0003076,4.57e-12,12;UBERON:0003057,4.57e-12,12;UBERON:0004111,8.71e-11,122;UBERON:0011216,9.00e-11,194;UBERON:0002420,1.21e-10,8;UBERON:0007245,1.21e-10,8;UBERON:0010009,1.21e-10,8;UBERON:0010011,1.21e-10,8;UBERON:0000454,1.21e-10,8;UBERON:0002240,1.14e-09,6;UBERON:0005174,1.14e-09,6;UBERON:0001137,1.14e-09,6;UBERON:0001948,2.92e-08,5;UBERON:0002315,2.92e-08,5;UBERON:0000369,7.01e-07,5;UBERON:0002435,7.01e-07,5;UBERON:0000204,7.01e-07,5;UBERON:0010082,7.01e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,1.5869729378161,3.80298842103708,0,0,0,0,0,0,0,2.48855069540346,2.16009501330705,4.6271491497304,4.57041575046086,3.3130281142742,1.22490799214954,0.670918297127655,1.83843757322004,7.70811166995721,3.83062014255563,3.22573719838111,2.63772575460388,1.55528994124096,2.6045668527838,2.51264699101243,5.06486349028512,3.0559649555362,4.71405736757868,3.41692033917847,3.35519002485541,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,3.77004072264219,0,0,0,0,3.59497534571574,3.20250421973039,1.7591609295801,7.82209440865244,4.85859368927628,2.49345653471472,2.92034273521964,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,3.60166143327496,0,0.264450566663544,0,0.696710015581316,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.6335622843583,0,0,0.94652465824877,1.17131623288992,3.23135096599198,0.238968797952552,0.668396022247182,2.26461224631066,1.61924280669958,3.79932615284705,2.76701444562566,2.89189184779626,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0,0.532020700926821,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,9.03602948187307,6.90487854760765,7.44764167471216,14.7793736815571,9.59115527678899,9.82012066606611,9.45031500324528,9.00642406448441,8.15656336171568,7.7664046762773,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,2.02783439912192,0.754505365544305,0.842773567228942,0.320125762024346,0.402048282689293,0.952587382566147,0.927074607558844,0.192909220463705,0,0.294397840268795,1.37147700954166,0.887379030796687,0.715308569841963,1.0174249164263,0.752875043322645,0.592302255241736,0.548783918618318,1.31534855718921,0.679020569229309,1.68342681497322,1.30498519936592,0.0985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,0.249810577937946,0.701794825336225,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p5@Ralyl | |short_description=p5@Ralyl | ||
}} | }} |
Latest revision as of 15:42, 1 October 2015
Short description: | p5@Ralyl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ralyl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -19bp_to_NM_001163328, NM_178631, uc008oqb.2, uc008oqc.2_5end |
EntrezGene: | Ralyl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.66e-29 | 33 |
neuronal stem cell | 2.66e-29 | 33 |
neuroblast | 2.66e-29 | 33 |
electrically signaling cell | 2.66e-29 | 33 |
CNS neuron (sensu Vertebrata) | 2.47e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.47e-27 | 23 |
electrically responsive cell | 1.41e-23 | 39 |
electrically active cell | 1.41e-23 | 39 |
neural cell | 1.18e-20 | 43 |
ectodermal cell | 5.20e-20 | 44 |
neurectodermal cell | 5.20e-20 | 44 |
embryonic cell | 8.02e-10 | 70 |