FFCP PHASE1:Mm9::chr5:111082463..111082501,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:111082463..111082501,+ to FFCP PHASE1:Mm9::chr5:111082463..111082501,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69663 | |EntrezGene=69663 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=301 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P9R1 | |UniProt=Q6P9R1 | ||
|association_with_transcript=0bp_to_ENSMUST00000031478,NM_027156,uc008yre.2_5end | |||
|cluster_id=chr5:111082463..111082501,+ | |||
|description=CAGE_peak_1_at_Ddx51_5end | |||
|id=chr5:111082463..111082501,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.24e-13!32;CL:0002032!2.24e-13!32;CL:0000037!2.24e-13!32;CL:0000566!2.24e-13!32;CL:0000837!2.24e-13!32;CL:0002320!1.04e-10!46;CL:0000134!1.04e-10!46;CL:0002031!2.24e-10!25;CL:0000063!5.78e-09!66;CL:0000542!1.30e-08!13;CL:0000051!1.30e-08!13;CL:0000838!2.28e-08!12;CL:0000084!6.90e-08!11;CL:0000827!6.90e-08!11;CL:0000219!4.21e-07!54;CL:0000738!6.77e-07!17;CL:0002087!6.77e-07!17;CL:0000791!7.79e-07!9;CL:0000789!7.79e-07!9;CL:0002420!7.79e-07!9;CL:0002419!7.79e-07!9;CL:0000790!7.79e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.24e-13,32;CL:0002032,2.24e-13,32;CL:0000037,2.24e-13,32;CL:0000837,2.24e-13,32;CL:0002320,1.04e-10,46;CL:0000134,1.04e-10,46;CL:0002031,2.24e-10,25;CL:0000542,1.30e-08,13;CL:0000051,1.30e-08,13;CL:0000838,2.28e-08,12;CL:0000084,6.90e-08,11;CL:0000827,6.90e-08,11;CL:0000219,4.21e-07,54;CL:0000738,6.77e-07,17;CL:0002087,6.77e-07,17;CL:0000791,7.79e-07,9;CL:0000789,7.79e-07,9;CL:0002420,7.79e-07,9;CL:0002419,7.79e-07,9;CL:0000790,7.79e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.29e-11!45;UBERON:0003061!3.29e-11!45;UBERON:0002384!1.04e-10!46;UBERON:0002193!2.10e-09!48;UBERON:0002370!1.14e-08!23;UBERON:0000974!1.14e-08!23;UBERON:0004807!1.14e-08!23;UBERON:0005058!1.14e-08!23;UBERON:0003351!1.14e-08!23;UBERON:0009113!1.14e-08!23;UBERON:0003295!1.14e-08!23;UBERON:0009722!1.14e-08!23;UBERON:0005562!1.14e-08!23;UBERON:0007690!1.14e-08!23;UBERON:0006562!1.82e-08!24;UBERON:0001557!1.82e-08!24;UBERON:0001042!1.82e-08!24;UBERON:0008814!1.82e-08!24;UBERON:0009145!1.82e-08!24;UBERON:0004177!7.79e-08!29;UBERON:0003408!1.01e-07!24;UBERON:0002405!3.28e-07!70;UBERON:0000072!6.40e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.29e-11,45;UBERON:0003061,3.29e-11,45;UBERON:0002384,1.04e-10,46;UBERON:0000153,1.61e-09,43;UBERON:0002193,2.10e-09,48;UBERON:0002405,2.10e-09,48;UBERON:0002370,1.14e-08,23;UBERON:0000974,1.14e-08,23;UBERON:0004807,1.14e-08,23;UBERON:0005058,1.14e-08,23;UBERON:0003351,1.14e-08,23;UBERON:0009113,1.14e-08,23;UBERON:0003295,1.14e-08,23;UBERON:0009722,1.14e-08,23;UBERON:0005562,1.14e-08,23;UBERON:0007690,1.14e-08,23;UBERON:0006562,1.82e-08,24;UBERON:0001557,1.82e-08,24;UBERON:0001042,1.82e-08,24;UBERON:0008814,1.82e-08,24;UBERON:0009145,1.82e-08,24;UBERON:0007811,3.45e-08,36;UBERON:0004177,7.79e-08,29;UBERON:0005057,7.79e-08,29;UBERON:0003408,1.01e-07,24;UBERON:0000072,6.40e-07,27 | |||
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| ||
|short_description=p1@Ddx51 | |||
}} | }} |
Latest revision as of 15:14, 1 October 2015
Short description: | p1@Ddx51 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ddx51_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 0bp_to_ENSMUST00000031478, NM_027156, uc008yre.2_5end |
EntrezGene: | Ddx51 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.24e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.24e-13 | 32 |
hematopoietic stem cell | 2.24e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.24e-13 | 32 |
connective tissue cell | 1.04e-10 | 46 |
mesenchymal cell | 1.04e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 2.24e-10 | 25 |
lymphocyte | 1.30e-08 | 13 |
common lymphoid progenitor | 1.30e-08 | 13 |
lymphoid lineage restricted progenitor cell | 2.28e-08 | 12 |
T cell | 6.90e-08 | 11 |
pro-T cell | 6.90e-08 | 11 |
motile cell | 4.21e-07 | 54 |
leukocyte | 6.77e-07 | 17 |
nongranular leukocyte | 6.77e-07 | 17 |
mature alpha-beta T cell | 7.79e-07 | 9 |
alpha-beta T cell | 7.79e-07 | 9 |
immature T cell | 7.79e-07 | 9 |
mature T cell | 7.79e-07 | 9 |
immature alpha-beta T cell | 7.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.29e-11 | 45 |
blood island | 3.29e-11 | 45 |
connective tissue | 1.04e-10 | 46 |
anterior region of body | 1.61e-09 | 43 |
hemolymphoid system | 2.10e-09 | 48 |
immune system | 2.10e-09 | 48 |
thymus | 1.14e-08 | 23 |
neck | 1.14e-08 | 23 |
respiratory system epithelium | 1.14e-08 | 23 |
hemolymphoid system gland | 1.14e-08 | 23 |
pharyngeal epithelium | 1.14e-08 | 23 |
thymic region | 1.14e-08 | 23 |
pharyngeal gland | 1.14e-08 | 23 |
entire pharyngeal arch endoderm | 1.14e-08 | 23 |
thymus primordium | 1.14e-08 | 23 |
early pharyngeal endoderm | 1.14e-08 | 23 |
pharynx | 1.82e-08 | 24 |
upper respiratory tract | 1.82e-08 | 24 |
chordate pharynx | 1.82e-08 | 24 |
pharyngeal arch system | 1.82e-08 | 24 |
pharyngeal region of foregut | 1.82e-08 | 24 |
craniocervical region | 3.45e-08 | 36 |
hemopoietic organ | 7.79e-08 | 29 |
immune organ | 7.79e-08 | 29 |
gland of gut | 1.01e-07 | 24 |
segment of respiratory tract | 6.40e-07 | 27 |