FFCP PHASE1:Mm9::chr1:74998236..74998252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16147 | |EntrezGene=16147 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P97812 | |UniProt=P97812 | ||
|association_with_transcript=0bp_to_ENSMUST00000006713_5end | |association_with_transcript=0bp_to_ENSMUST00000006713_5end | ||
|cluster_id=chr1:74998236..74998252,- | |||
|description=CAGE_peak_1_at_Ihh_5end | |description=CAGE_peak_1_at_Ihh_5end | ||
|id=chr1:74998236..74998252,- | |id=chr1:74998236..74998252,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.47e-07,9;CL:0002251,2.47e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.29e-18!59;UBERON:0000160!2.91e-14!43;UBERON:0000344!1.33e-10!15;UBERON:0001242!2.46e-09!13;UBERON:0000060!2.46e-09!13;UBERON:0001262!2.46e-09!13;UBERON:0004786!2.46e-09!13;UBERON:0004923!8.03e-09!24;UBERON:0004119!2.10e-07!130;UBERON:0000925!2.10e-07!130;UBERON:0006595!2.10e-07!130;UBERON:0001007!4.42e-07!128;UBERON:0001555!4.42e-07!128;UBERON:0007026!4.42e-07!128 | |ontology_enrichment_uberon=UBERON:0005409!1.29e-18!59;UBERON:0000160!2.91e-14!43;UBERON:0000344!1.33e-10!15;UBERON:0001242!2.46e-09!13;UBERON:0000060!2.46e-09!13;UBERON:0001262!2.46e-09!13;UBERON:0004786!2.46e-09!13;UBERON:0004923!8.03e-09!24;UBERON:0004119!2.10e-07!130;UBERON:0000925!2.10e-07!130;UBERON:0006595!2.10e-07!130;UBERON:0001007!4.42e-07!128;UBERON:0001555!4.42e-07!128;UBERON:0007026!4.42e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.86e-27,47;UBERON:0000160,3.72e-24,31;UBERON:0000344,5.67e-12,15;UBERON:0001242,1.63e-10,13;UBERON:0001262,1.63e-10,13;UBERON:0004786,1.63e-10,13;UBERON:0004923,2.62e-09,24;UBERON:0004119,2.25e-08,118;UBERON:0000925,2.25e-08,118;UBERON:0006595,2.25e-08,118;UBERON:0001007,5.29e-08,116;UBERON:0001555,5.29e-08,116;UBERON:0007026,5.29e-08,116;UBERON:0003350,2.47e-07,9;UBERON:0004808,2.47e-07,9;UBERON:0001277,2.47e-07,9;UBERON:0004921,3.64e-07,114 | |||
|phase1_expression=0,200.311883984993,153.789742913663,151.837034076029,175.313505481222,58.9256244410733,53.4972946963754,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,82.236105315811,81.2108854977782,124.608336212959,96.4906871396328,112.260512229348,129.405948649791,125.006944360926,66.0756921752808,0,0,0,7.51014211353314,14.2961795008303,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0.679971333707751,3.2382191498269,1.29955283489534,0.448026887097336,8.84799846830037,0,0,0,0,0,0,0,0,0,0,25.0062696584741,0,0,0.173485326766136,1.52232739156071,1.15307748628029,0.753613202763113,0.352766121407114,0.376999773989026,19.5284024510155,0.578397427679647,0,2.75003644910596,1.54589062922275,0.969750506270444,296.362900336814,0,0,107.291963187608,0,0,0,0,0,0,0,0,0,0,1.42575109390443,2.11491850037158,3.79084137650512,0.841767423545896,3.513251959993,1.60931473103431,1.98068342785884,1.50704817835715,1.63287597963187,1.2811372028485,1.96773621575431,1.03481348295606,0,4.16033376369202,7.38994721488585,7.01426343768239,5.56094498451196,2.089512999133,1.02891068203972,0.796137067273973,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,150.010127474644,107.895831198726,17.0630600428187,32.5131340604614,59.7945020534513,77.2447899307402,76.9428031703251,78.1827323322618,102.498277293615,82.0200794525574,79.9245963984857,81.771110008913,85.7841983324129,81.7925661875342,96.1814321942389,96.3843762551137,0.569003702859245,1.14248512609729,12.3978509240388,10.7935203758017,17.6496763322539,25.2488951605147,10.0546094027569,12.6944727262458,11.9319033159445,15.1778511623815,0.296452627087149,5.33904338291501,3.34150291692445,3.82265591054251,6.49152388443209,15.4353382241547,16.0414286622294,16.686375972147,1.13494658742525,0.549122826376163,1.43768206527355,1.86070473834252,3.12037673114561,4.04126204715379,1.61457672169721,0,0.184753190166605,0,0.162964976442026,1.69745085775188,0,0,0,0.390267295715598,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,13.4843080947855,0.534196811001766,0.325773918707152,36.7883374228754,0,0.242780636154981,4.23252979750651,0,0.295301892880773,1.22974059177571,16.7978390559344,0,0,0,0,0,4.76615448055303,0.720244376125241,0,0.428674070063185,0.177340233642274,1.78368817602071,2.13913726782757,2.74018454203139,3.98941903708308,2.75381692122966,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.656563598980245,97.0631185977403,0,0,1.857481811669,7.22258656741876,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,52.5068839908312,33.0571113292286,32.3277952731689,54.9747184782968,67.9536962047023,92.5857270283793,40.0547108762918,49.5920734352016,23.8197907205467,178.220588276215,0,0,0,0,0,0.516639293910924,0,0.234714477291508,0.651021924219751,0.104859344425711,0,0.576060012515731,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0.233753804363138,0,0,0.0897138566094757,0,0,0.375364950902364,19.5972237965974,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.59609949360412,2.56100408631201,6.07766792670735,4.61148957781561,5.88299227040045,8.66762238426299,7.2112270033613,8.3438994493872,7.58091635291392,7.09742039692671,6.97917463128482,6.46126401542189,8.00314405060866,8.44301393647515,10.4784612082276,6.2577536010222,6.94473193669338,5.35711671044299,8.53753736779504,5.82877729055206,5.32427418478012,5.48403236878838,9.01147783120437,7.15231291156513,6.51532480765909,5.3049112133104,7.10288220882176,6.24698923690964,7.85599180320834,8.06718123244384,7.19082721341613,6.54769669071503,7.2820315357404,8.68079749415136,2.24829520144151,7.95367468714389,7.30561583764214,3.44318997723918,4.19123696327079,0.695603506861264 | |phase1_expression=0,200.311883984993,153.789742913663,151.837034076029,175.313505481222,58.9256244410733,53.4972946963754,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,82.236105315811,81.2108854977782,124.608336212959,96.4906871396328,112.260512229348,129.405948649791,125.006944360926,66.0756921752808,0,0,0,7.51014211353314,14.2961795008303,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0.679971333707751,3.2382191498269,1.29955283489534,0.448026887097336,8.84799846830037,0,0,0,0,0,0,0,0,0,0,25.0062696584741,0,0,0.173485326766136,1.52232739156071,1.15307748628029,0.753613202763113,0.352766121407114,0.376999773989026,19.5284024510155,0.578397427679647,0,2.75003644910596,1.54589062922275,0.969750506270444,296.362900336814,0,0,107.291963187608,0,0,0,0,0,0,0,0,0,0,1.42575109390443,2.11491850037158,3.79084137650512,0.841767423545896,3.513251959993,1.60931473103431,1.98068342785884,1.50704817835715,1.63287597963187,1.2811372028485,1.96773621575431,1.03481348295606,0,4.16033376369202,7.38994721488585,7.01426343768239,5.56094498451196,2.089512999133,1.02891068203972,0.796137067273973,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,150.010127474644,107.895831198726,17.0630600428187,32.5131340604614,59.7945020534513,77.2447899307402,76.9428031703251,78.1827323322618,102.498277293615,82.0200794525574,79.9245963984857,81.771110008913,85.7841983324129,81.7925661875342,96.1814321942389,96.3843762551137,0.569003702859245,1.14248512609729,12.3978509240388,10.7935203758017,17.6496763322539,25.2488951605147,10.0546094027569,12.6944727262458,11.9319033159445,15.1778511623815,0.296452627087149,5.33904338291501,3.34150291692445,3.82265591054251,6.49152388443209,15.4353382241547,16.0414286622294,16.686375972147,1.13494658742525,0.549122826376163,1.43768206527355,1.86070473834252,3.12037673114561,4.04126204715379,1.61457672169721,0,0.184753190166605,0,0.162964976442026,1.69745085775188,0,0,0,0.390267295715598,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,13.4843080947855,0.534196811001766,0.325773918707152,36.7883374228754,0,0.242780636154981,4.23252979750651,0,0.295301892880773,1.22974059177571,16.7978390559344,0,0,0,0,0,4.76615448055303,0.720244376125241,0,0.428674070063185,0.177340233642274,1.78368817602071,2.13913726782757,2.74018454203139,3.98941903708308,2.75381692122966,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.656563598980245,97.0631185977403,0,0,1.857481811669,7.22258656741876,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0,52.5068839908312,33.0571113292286,32.3277952731689,54.9747184782968,67.9536962047023,92.5857270283793,40.0547108762918,49.5920734352016,23.8197907205467,178.220588276215,0,0,0,0,0,0.516639293910924,0,0.234714477291508,0.651021924219751,0.104859344425711,0,0.576060012515731,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0.233753804363138,0,0,0.0897138566094757,0,0,0.375364950902364,19.5972237965974,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.59609949360412,2.56100408631201,6.07766792670735,4.61148957781561,5.88299227040045,8.66762238426299,7.2112270033613,8.3438994493872,7.58091635291392,7.09742039692671,6.97917463128482,6.46126401542189,8.00314405060866,8.44301393647515,10.4784612082276,6.2577536010222,6.94473193669338,5.35711671044299,8.53753736779504,5.82877729055206,5.32427418478012,5.48403236878838,9.01147783120437,7.15231291156513,6.51532480765909,5.3049112133104,7.10288220882176,6.24698923690964,7.85599180320834,8.06718123244384,7.19082721341613,6.54769669071503,7.2820315357404,8.68079749415136,2.24829520144151,7.95367468714389,7.30561583764214,3.44318997723918,4.19123696327079,0.695603506861264 | ||
|short_description=p1@Ihh | |short_description=p1@Ihh | ||
}} | }} |
Latest revision as of 15:01, 1 October 2015
Short description: | p1@Ihh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ihh_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000006713_5end |
EntrezGene: | Ihh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.47e-07 | 9 |
epithelial cell of alimentary canal | 2.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.86e-27 | 47 |
intestine | 3.72e-24 | 31 |
mucosa | 5.67e-12 | 15 |
intestinal mucosa | 1.63e-10 | 13 |
wall of intestine | 1.63e-10 | 13 |
gastrointestinal system mucosa | 1.63e-10 | 13 |
organ component layer | 2.62e-09 | 24 |
endoderm-derived structure | 2.25e-08 | 118 |
endoderm | 2.25e-08 | 118 |
presumptive endoderm | 2.25e-08 | 118 |
digestive system | 5.29e-08 | 116 |
digestive tract | 5.29e-08 | 116 |
primitive gut | 5.29e-08 | 116 |
epithelium of mucosa | 2.47e-07 | 9 |
gastrointestinal system epithelium | 2.47e-07 | 9 |
intestinal epithelium | 2.47e-07 | 9 |
subdivision of digestive tract | 3.64e-07 | 114 |