FFCP PHASE1:Mm9::chr1:74455772..74455802,+: Difference between revisions
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|id=chr1:74455772..74455802,+
|short_description=p2@Vil1
|description=CAGE_peak_2_at_Vil1_5end
|association_with_transcript=-147bp_to_ENSMUST00000027366_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22349 | |EntrezGene=22349 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q62468 | |UniProt=Q62468 | ||
|association_with_transcript=-147bp_to_ENSMUST00000027366_5end | |||
|cluster_id=chr1:74455772..74455802,+ | |||
|description=CAGE_peak_2_at_Vil1_5end | |||
|id=chr1:74455772..74455802,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.51e-10!9;CL:0002251!3.51e-10!9;CL:0000239!1.13e-07!6;CL:0000677!1.13e-07!6;CL:0000212!1.13e-07!6;CL:0000584!1.13e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.43e-17,9;CL:0002251,4.43e-17,9;CL:0000239,1.43e-12,6;CL:0000677,1.43e-12,6;CL:0000584,1.43e-12,6;CL:0000066,1.18e-10,25;CL:0000075,1.21e-10,7;CL:0002076,1.76e-09,15;CL:0000223,4.70e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.48e-33!59;UBERON:0000160!2.12e-31!43;UBERON:0000344!2.34e-16!15;UBERON:0001242!2.54e-14!13;UBERON:0000060!2.54e-14!13;UBERON:0001262!2.54e-14!13;UBERON:0004786!2.54e-14!13;UBERON:0001007!6.76e-12!128;UBERON:0001555!6.76e-12!128;UBERON:0007026!6.76e-12!128;UBERON:0004119!1.91e-11!130;UBERON:0000925!1.91e-11!130;UBERON:0006595!1.91e-11!130;UBERON:0004921!1.14e-10!126;UBERON:0004185!1.14e-10!126;UBERON:0003350!3.51e-10!9;UBERON:0004808!3.51e-10!9;UBERON:0001277!3.51e-10!9;UBERON:0004923!3.51e-09!24;UBERON:0002108!7.17e-08!16;UBERON:0000485!8.24e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.07e-50,47;UBERON:0000160,2.40e-49,31;UBERON:0000344,3.13e-28,15;UBERON:0001242,1.49e-24,13;UBERON:0001262,1.49e-24,13;UBERON:0004786,1.49e-24,13;UBERON:0001007,8.20e-19,116;UBERON:0001555,8.20e-19,116;UBERON:0007026,8.20e-19,116;UBERON:0004119,2.47e-18,118;UBERON:0000925,2.47e-18,118;UBERON:0006595,2.47e-18,118;UBERON:0003350,4.43e-17,9;UBERON:0004808,4.43e-17,9;UBERON:0001277,4.43e-17,9;UBERON:0004921,1.19e-16,114;UBERON:0004923,3.86e-16,24;UBERON:0000485,1.28e-13,11;UBERON:0002108,7.20e-09,4;UBERON:0000331,7.08e-07,3;UBERON:0002116,7.08e-07,3;UBERON:0001204,7.08e-07,3;UBERON:0001168,7.08e-07,3 | |||
|phase1_expression=0,16.40184415905,15.9249733786338,26.9193148063079,20.5367249278002,5.54001597309236,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0793332058198,10.5528269290898,10.3361753540704,8.61523992318149,9.69620547086501,15.3918969759663,13.3575968772763,6.87364583031445,0,0,0,5.77703239502549,6.31691652362271,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,1.82577746171277,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,1.94112595522402,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,26.0948465705371,0,0,18.3929079750186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.3285788261206,10.0491215332147,0.213288250535234,0,3.47942145569652,7.05892336181699,5.55945109612176,5.51654315726422,14.7104009078799,5.92916237006439,6.53471542880701,6.36660710531683,5.45899443933536,15.2799299471218,15.1296634912286,15.1347367673319,0,0,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0.738050739898011,0.627994911365499,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.906970670894253,0.943025398779491,0.590603785761546,0,1.80899805217755,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0.813277868507395,2.16010681643603,2.92723614420256,5.02233896616208,3.77620169877498,4.54594006489348,10.2084817373772,10.628427809927,0,0,0,0,0.388902376688095,0.387479470433193,0.337912250981556,0.704143431874524,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0,0.34461281373368,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,0.588795680537589,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,1.12228454331548,0.237270036248348,0.394017929502254,0,0.464810523557898,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,16.40184415905,15.9249733786338,26.9193148063079,20.5367249278002,5.54001597309236,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0793332058198,10.5528269290898,10.3361753540704,8.61523992318149,9.69620547086501,15.3918969759663,13.3575968772763,6.87364583031445,0,0,0,5.77703239502549,6.31691652362271,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,1.82577746171277,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,1.94112595522402,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,26.0948465705371,0,0,18.3929079750186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.3285788261206,10.0491215332147,0.213288250535234,0,3.47942145569652,7.05892336181699,5.55945109612176,5.51654315726422,14.7104009078799,5.92916237006439,6.53471542880701,6.36660710531683,5.45899443933536,15.2799299471218,15.1296634912286,15.1347367673319,0,0,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0.738050739898011,0.627994911365499,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.906970670894253,0.943025398779491,0.590603785761546,0,1.80899805217755,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0.813277868507395,2.16010681643603,2.92723614420256,5.02233896616208,3.77620169877498,4.54594006489348,10.2084817373772,10.628427809927,0,0,0,0,0.388902376688095,0.387479470433193,0.337912250981556,0.704143431874524,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0,0.34461281373368,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,0.588795680537589,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,1.12228454331548,0.237270036248348,0.394017929502254,0,0.464810523557898,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p2@Vil1 | |||
}} | }} |
Latest revision as of 14:42, 1 October 2015
Short description: | p2@Vil1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vil1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -147bp_to_ENSMUST00000027366_5end |
EntrezGene: | Vil1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.43e-17 | 9 |
epithelial cell of alimentary canal | 4.43e-17 | 9 |
brush border epithelial cell | 1.43e-12 | 6 |
gut absorptive cell | 1.43e-12 | 6 |
enterocyte | 1.43e-12 | 6 |
epithelial cell | 1.18e-10 | 25 |
columnar/cuboidal epithelial cell | 1.21e-10 | 7 |
endo-epithelial cell | 1.76e-09 | 15 |
endodermal cell | 4.70e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.07e-50 | 47 |
intestine | 2.40e-49 | 31 |
mucosa | 3.13e-28 | 15 |
intestinal mucosa | 1.49e-24 | 13 |
wall of intestine | 1.49e-24 | 13 |
gastrointestinal system mucosa | 1.49e-24 | 13 |
digestive system | 8.20e-19 | 116 |
digestive tract | 8.20e-19 | 116 |
primitive gut | 8.20e-19 | 116 |
endoderm-derived structure | 2.47e-18 | 118 |
endoderm | 2.47e-18 | 118 |
presumptive endoderm | 2.47e-18 | 118 |
epithelium of mucosa | 4.43e-17 | 9 |
gastrointestinal system epithelium | 4.43e-17 | 9 |
intestinal epithelium | 4.43e-17 | 9 |
subdivision of digestive tract | 1.19e-16 | 114 |
organ component layer | 3.86e-16 | 24 |
simple columnar epithelium | 1.28e-13 | 11 |
small intestine | 7.20e-09 | 4 |
ileal mucosa | 7.08e-07 | 3 |
ileum | 7.08e-07 | 3 |
mucosa of small intestine | 7.08e-07 | 3 |
wall of small intestine | 7.08e-07 | 3 |