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FFCP PHASE1:Mm9::chr3:129672975..129673048,-: Difference between revisions

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{{FFCP|EntrezGene=66815|HGNC=|MCL_coexpression_id=86|UniProt=D6RI54,D6RIL8|association_with_transcript=0bp_to_ENSMUST00000122961,ENSMUST00000153506_5end|description=CAGE_peak_1_at_Ccdc109b_5end|id=chr3:129672975..129673048,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!4.86e-09!88;UBERON:0004177!1.85e-07!29;UBERON:0002390!5.99e-07!45;UBERON:0003061!5.99e-07!45;UBERON:0002193!7.14e-07!48;UBERON:0000072!7.47e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.54e-11,120;UBERON:0004120,5.54e-11,120;UBERON:0006603,5.54e-11,120;UBERON:0000077,6.16e-09,35;UBERON:0003081,1.54e-08,87;UBERON:0004177,8.33e-08,29;UBERON:0005057,8.33e-08,29;UBERON:0000072,3.52e-07,27;UBERON:0002390,3.78e-07,45;UBERON:0003061,3.78e-07,45;UBERON:0002193,4.54e-07,48;UBERON:0002405,4.54e-07,48;UBERON:0006562,5.14e-07,24;UBERON:0001557,5.14e-07,24;UBERON:0001042,5.14e-07,24;UBERON:0008814,5.14e-07,24;UBERON:0009145,5.14e-07,24;UBERON:0003408,6.85e-07,24;UBERON:0002370,9.88e-07,23;UBERON:0000974,9.88e-07,23;UBERON:0004807,9.88e-07,23;UBERON:0005058,9.88e-07,23;UBERON:0003351,9.88e-07,23;UBERON:0009113,9.88e-07,23;UBERON:0003295,9.88e-07,23;UBERON:0009722,9.88e-07,23;UBERON:0005562,9.88e-07,23;UBERON:0007690,9.88e-07,23|phase1_expression=0.160148847104794,0.348975407639361,1.36499771816861,0,0,5.54001597309236,4.43864017131499,23.1130748960421,1.68946466582,3.27690336850791,0,0.398860794976682,2.9104124088305,3.93391810885488,1.99865857089398,1.82227740650843,2.79824751251259,2.20823515750766,1.7824876368746,0.84877930359606,3.82694805679814,2.18440092641948,9.40319240900167,1.43993180514066,1.37645568640302,1.14846392823004,1.29228598847722,0.215471232685889,0.570070258369122,0.252030129759931,1.77384408524244,1.90509202037889,9.84103660135312,0,0.866554859253824,1.32987716286794,0.204169356262369,7.53356935326434,48.4427913604756,18.3233310390829,0,0.683045484958446,3.88408282424923,23.0391176895306,20.1740093126834,26.6142790634438,0.782391344348039,0.872100625521786,1.09843091367236,2.3331587888914,2.93971485413261,1.43752564364972,0,3.62681071005672,3.6970317905671,3.34437266846731,2.29226751951005,1.03134418455488,0.202316460859598,0,1.26766280701236,3.04960078862219,2.66788438833342,3.1496490104849,1.97773272513395,4.2628806896766,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0,2.28520787523043,3.09215957332259,0.244981598429908,0.0958454710182364,0.919218786610021,0,1.0214987046815,0.921639199537461,0.131886287730194,0.823388792421687,0.52091337055676,0,0,0.763991238884051,2.06240009831567,2.70506193518296,1.67759501242771,3.02904773332736,4.45872204630035,0.289864488701678,0,0,0,0,0,2.94933282276679,45.3344658057634,57.6724930218369,40.9873906431995,0,10.2661181931454,5.09610479413291,7.11066703153331,1.73192832808971,3.54703811665138,5.56076889516262,1.1418387971906,9.58070169494535,11.5784868470563,5.89850111004862,10.9607572192371,5.99600292865752,10.5505848386836,9.40709657085639,7.1629957057915,4.6967043869531,5.92857363371638,9.73071607144862,3.88240439873782,5.30019644304944,4.84875253135222,0,0,0,1.02182822083437,1.1981512450592,2.39961092397363,2.92261522268049,4.04434726393021,2.28750301409313,0.628271760564322,1.21677024134594,0.511430914660661,3.94797284663164,2.75810147215188,3.66621709861139,4.47865094196335,0.252722758433675,2.10441855886474,0,0.229902104433473,0.900310649026746,0.90422890701429,1.56483948048054,1.7935920839879,1.12442069471675,3.88055056108524,6.25147179505242,1.89106080167819,2.46331573829528,2.41115305670332,3.05851974148158,3.1342694986995,5.96768195583036,0.199034266818493,4.21327912387941,3.60287069960601,4.26245249093389,0.828503090142008,0.703578179943289,1.62055855314913,0.710234206755631,1.37734962223183,1.54267112887378,1.62773761325285,1.87791380979733,2.21854150497622,0.987359099480883,1.31333971263276,2.26992666728396,3.65499968563331,5.48875288227627,2.95254121272818,1.68231958851302,3.49875682089567,0.991256348951394,0.528901133327089,0.639864751605702,0,1.9330119198314,0.80673409849337,0.667134131534611,0.951128130562796,0.949058123089023,1.81168850196412,1.75934646160189,1.39269530428806,0.779856348476481,0,2.80979464837102,2.58883655230677,0.379335801906163,2.28497025219458,0,0.203651327845314,0.969762435838129,0.561086559122548,0.632365371242573,1.62371162777562,0.784993639206874,0.863780147452604,0.296452627087149,3.33690211432188,2.16214894624523,5.62155280962134,9.33156558387113,12.0588579876208,5.85639459097266,6.04161888646702,3.08056930872567,1.09824565275233,0,1.11642284300551,0.936113019343682,0,0.179397413521912,0,13.6717360723287,0.37898282354097,0.977789858652155,0.678980343100753,1.40814148973101,1.17254380209271,2.85652369063216,3.90267295715598,2.83743259391144,1.99318220683897,3.18909537314974,5.89907932976657,5.87128938344045,5.49666422609744,85.9510318453852,91.3761548815432,3.44234991113325,2.48343071674259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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66815
|HGNC=
|MCL_coexpression_id=86
|TSSclassifier=NA
|UniProt=D6RI54,D6RIL8
|association_with_transcript=0bp_to_ENSMUST00000122961,ENSMUST00000153506_5end
|cluster_id=chr3:129672975..129673048,-
|description=CAGE_peak_1_at_Ccdc109b_5end
|id=chr3:129672975..129673048,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.54e-11,120;UBERON:0004120,5.54e-11,120;UBERON:0006603,5.54e-11,120;UBERON:0000077,6.16e-09,35;UBERON:0003081,1.54e-08,87;UBERON:0004177,8.33e-08,29;UBERON:0005057,8.33e-08,29;UBERON:0000072,3.52e-07,27;UBERON:0002390,3.78e-07,45;UBERON:0003061,3.78e-07,45;UBERON:0002193,4.54e-07,48;UBERON:0002405,4.54e-07,48;UBERON:0006562,5.14e-07,24;UBERON:0001557,5.14e-07,24;UBERON:0001042,5.14e-07,24;UBERON:0008814,5.14e-07,24;UBERON:0009145,5.14e-07,24;UBERON:0003408,6.85e-07,24;UBERON:0002370,9.88e-07,23;UBERON:0000974,9.88e-07,23;UBERON:0004807,9.88e-07,23;UBERON:0005058,9.88e-07,23;UBERON:0003351,9.88e-07,23;UBERON:0009113,9.88e-07,23;UBERON:0003295,9.88e-07,23;UBERON:0009722,9.88e-07,23;UBERON:0005562,9.88e-07,23;UBERON:0007690,9.88e-07,23
|phase1_expression=0.160148847104794,0.348975407639361,1.36499771816861,0,0,5.54001597309236,4.43864017131499,23.1130748960421,1.68946466582,3.27690336850791,0,0.398860794976682,2.9104124088305,3.93391810885488,1.99865857089398,1.82227740650843,2.79824751251259,2.20823515750766,1.7824876368746,0.84877930359606,3.82694805679814,2.18440092641948,9.40319240900167,1.43993180514066,1.37645568640302,1.14846392823004,1.29228598847722,0.215471232685889,0.570070258369122,0.252030129759931,1.77384408524244,1.90509202037889,9.84103660135312,0,0.866554859253824,1.32987716286794,0.204169356262369,7.53356935326434,48.4427913604756,18.3233310390829,0,0.683045484958446,3.88408282424923,23.0391176895306,20.1740093126834,26.6142790634438,0.782391344348039,0.872100625521786,1.09843091367236,2.3331587888914,2.93971485413261,1.43752564364972,0,3.62681071005672,3.6970317905671,3.34437266846731,2.29226751951005,1.03134418455488,0.202316460859598,0,1.26766280701236,3.04960078862219,2.66788438833342,3.1496490104849,1.97773272513395,4.2628806896766,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0,2.28520787523043,3.09215957332259,0.244981598429908,0.0958454710182364,0.919218786610021,0,1.0214987046815,0.921639199537461,0.131886287730194,0.823388792421687,0.52091337055676,0,0,0.763991238884051,2.06240009831567,2.70506193518296,1.67759501242771,3.02904773332736,4.45872204630035,0.289864488701678,0,0,0,0,0,2.94933282276679,45.3344658057634,57.6724930218369,40.9873906431995,0,10.2661181931454,5.09610479413291,7.11066703153331,1.73192832808971,3.54703811665138,5.56076889516262,1.1418387971906,9.58070169494535,11.5784868470563,5.89850111004862,10.9607572192371,5.99600292865752,10.5505848386836,9.40709657085639,7.1629957057915,4.6967043869531,5.92857363371638,9.73071607144862,3.88240439873782,5.30019644304944,4.84875253135222,0,0,0,1.02182822083437,1.1981512450592,2.39961092397363,2.92261522268049,4.04434726393021,2.28750301409313,0.628271760564322,1.21677024134594,0.511430914660661,3.94797284663164,2.75810147215188,3.66621709861139,4.47865094196335,0.252722758433675,2.10441855886474,0,0.229902104433473,0.900310649026746,0.90422890701429,1.56483948048054,1.7935920839879,1.12442069471675,3.88055056108524,6.25147179505242,1.89106080167819,2.46331573829528,2.41115305670332,3.05851974148158,3.1342694986995,5.96768195583036,0.199034266818493,4.21327912387941,3.60287069960601,4.26245249093389,0.828503090142008,0.703578179943289,1.62055855314913,0.710234206755631,1.37734962223183,1.54267112887378,1.62773761325285,1.87791380979733,2.21854150497622,0.987359099480883,1.31333971263276,2.26992666728396,3.65499968563331,5.48875288227627,2.95254121272818,1.68231958851302,3.49875682089567,0.991256348951394,0.528901133327089,0.639864751605702,0,1.9330119198314,0.80673409849337,0.667134131534611,0.951128130562796,0.949058123089023,1.81168850196412,1.75934646160189,1.39269530428806,0.779856348476481,0,2.80979464837102,2.58883655230677,0.379335801906163,2.28497025219458,0,0.203651327845314,0.969762435838129,0.561086559122548,0.632365371242573,1.62371162777562,0.784993639206874,0.863780147452604,0.296452627087149,3.33690211432188,2.16214894624523,5.62155280962134,9.33156558387113,12.0588579876208,5.85639459097266,6.04161888646702,3.08056930872567,1.09824565275233,0,1.11642284300551,0.936113019343682,0,0.179397413521912,0,13.6717360723287,0.37898282354097,0.977789858652155,0.678980343100753,1.40814148973101,1.17254380209271,2.85652369063216,3.90267295715598,2.83743259391144,1.99318220683897,3.18909537314974,5.89907932976657,5.87128938344045,5.49666422609744,85.9510318453852,91.3761548815432,3.44234991113325,2.48343071674259,1.28440471990234,1.40654023910644,9.67216177722385,3.28212205365685,0.631016438832513,0.780877488593277,1.50796378412959,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,2.04579100537918,1.18586333383957,17.3513510867776,4.68402281187286,3.73937767701236,3.09485222771795,5.93892442701128,2.65490276679926,1.94224508923985,0.302323556964751,0.943025398779491,1.47650946440386,4.30409207121498,1.29214146584111,1.09060118843252,2.49548164869305,1.58018378967908,1.05418608574999,3.09406629744561,44.5975883537462,0.720244376125241,0.388076051348264,1.92903331528433,6.56158864476412,15.6964559489822,17.6067452044269,24.0527309800533,8.44818149029357,9.53244318887191,3.08739757276947,10.8824926941377,3.87514624070173,4.34253059482722,7.16234064018819,5.9090723908222,1.1659233465194,1.48340241608408,4.10090113914846,6.3979929068599,11.4820606969221,3.20226376907975,2.32380187125743,2.97411625168479,1.69978429993855,0.979660166265606,1.10559979043539,2.86401185404534,0.632671987162271,1.01659733563424,0.648032044930808,2.50905955217362,5.24070152990826,2.83215127408124,3.96736587481612,7.85267825952089,1.94422459937689,3.72803587852155,1.12738587736838,0.747582730219894,1.48912641411388,1.55560950675238,2.32487682259916,1.35164900392623,1.76035857968631,0.5208175393758,0.209718688851422,0,0.576060012515731,6.00421129193539,8.71718425747706,16.2283312320427,18.0589943939135,10.5625750443814,9.93406773906325,7.3319224207181,8.27061352177632,6.86571859647404,6.47757856567499,5.84791873793675,5.75001496364539,7.11967628138438,5.96072201126002,5.21479882314986,0.665957860122194,0.448569283047378,0.671538465456314,8.50034213741638,33.5951631057616,11.3554007045704,10.5040505748742,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0,1.81256963593682,0.51776031175182,0.62272408550506,0.798049746802062,2.21953687480374,4.61902762429759,3.98265008993166,4.77993121970037,1.55572709461131,1.64828045791115,3.20919209591815,2.52697211763797,1.2673964994512,3.01802146217722,2.71560371662659,2.68905640100451,2.5845961030026,2.85776214769844,2.89710814862139,3.08654752741928,2.47251540481984,3.53277408322554,3.42869252385415,1.24233064311536,1.66905332963125,2.0348498328526,2.72917203204459,2.36920902096694,1.46342378298218,2.10455769150274,3.25929873230068,1.68342681497322,2.37270036248348,1.97008964751127,1.22769312950907,2.47898945897546,2.89359916471712,2.74791635731741,3.04111090979031,4.29742108096597,3.44318997723918,4.63241980150983,3.2461496986859
|short_description=p1@Ccdc109b
}}

Latest revision as of 14:38, 1 October 2015

Short description:p1@Ccdc109b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc109b_5end
Coexpression cluster:MCL_coexpression_mm9:86
Association with transcript: 0bp_to_ENSMUST00000122961, ENSMUST00000153506_5end
EntrezGene:Ccdc109b
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ccdc109b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H148.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I745.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E357.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I840.99
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D711.58
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C19.41
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D79.33
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B113.67
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A185.95
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A191.38
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G844.60
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F615.70
pituitary gland, embryo E17.CNhs11039.1265-44F517.61
pituitary gland, neonate N00.CNhs11190.1308-22E924.05
placenta, adult pregnant day10.CNhs10472.539-13I78.45
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H34.34
skin, neonate N06.CNhs11097.693-20I57.16
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F211.48
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I216.23
thymus, embryo E16.CNhs11002.456-26C518.06
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G49.93
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D36.48
thymus, neonate N10.CNhs11194.748-24E45.85
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G77.12
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F533.60
uterus, adult.CNhs10509.92-27E511.36
vagina, adult.CNhs10502.89-27D510.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm5.54e-11120
mesoderm-derived structure5.54e-11120
presumptive mesoderm5.54e-11120
mixed endoderm/mesoderm-derived structure6.16e-0935
lateral plate mesoderm1.54e-0887
hemopoietic organ8.33e-0829
immune organ8.33e-0829
segment of respiratory tract3.52e-0727
hematopoietic system3.78e-0745
blood island3.78e-0745
hemolymphoid system4.54e-0748
immune system4.54e-0748
pharynx5.14e-0724
upper respiratory tract5.14e-0724
chordate pharynx5.14e-0724
pharyngeal arch system5.14e-0724
pharyngeal region of foregut5.14e-0724
gland of gut6.85e-0724
thymus9.88e-0723
neck9.88e-0723
respiratory system epithelium9.88e-0723
hemolymphoid system gland9.88e-0723
pharyngeal epithelium9.88e-0723
thymic region9.88e-0723
pharyngeal gland9.88e-0723
entire pharyngeal arch endoderm9.88e-0723
thymus primordium9.88e-0723
early pharyngeal endoderm9.88e-0723
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