FFCP PHASE1:Mm9::chr13:3923917..3923930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238463 | |EntrezGene=238463 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UX10 | |UniProt=Q3UX10 | ||
|association_with_transcript=-10bp_to_ENSMUST00000021639,NM_001033879,uc007pjg.2_5end | |association_with_transcript=-10bp_to_ENSMUST00000021639,NM_001033879,uc007pjg.2_5end | ||
|cluster_id=chr13:3923917..3923930,+ | |||
|description=CAGE_peak_2_at_Tubal3_5end | |description=CAGE_peak_2_at_Tubal3_5end | ||
|id=chr13:3923917..3923930,+ | |id=chr13:3923917..3923930,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.85e-11!9;CL:0002251!1.85e-11!9;CL:0000239!1.46e-08!6;CL:0000677!1.46e-08!6;CL:0000212!1.46e-08!6;CL:0000584!1.46e-08!6;CL:0000075!3.64e-07!7 | |ontology_enrichment_celltype=CL:0002563!1.85e-11!9;CL:0002251!1.85e-11!9;CL:0000239!1.46e-08!6;CL:0000677!1.46e-08!6;CL:0000212!1.46e-08!6;CL:0000584!1.46e-08!6;CL:0000075!3.64e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.17e-19,9;CL:0002251,5.17e-19,9;CL:0000239,6.63e-14,6;CL:0000677,6.63e-14,6;CL:0000584,6.63e-14,6;CL:0000075,8.11e-12,7;CL:0000066,9.33e-11,25;CL:0002076,9.47e-11,15;CL:0000682,1.07e-07,3;CL:0000223,1.16e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.13e-25!43;UBERON:0005409!1.08e-20!59;UBERON:0000344!5.34e-19!15;UBERON:0001242!9.84e-17!13;UBERON:0000060!9.84e-17!13;UBERON:0001262!9.84e-17!13;UBERON:0004786!9.84e-17!13;UBERON:0004923!6.45e-13!24;UBERON:0003350!1.85e-11!9;UBERON:0004808!1.85e-11!9;UBERON:0001277!1.85e-11!9;UBERON:0000485!6.03e-09!11 | |ontology_enrichment_uberon=UBERON:0000160!5.13e-25!43;UBERON:0005409!1.08e-20!59;UBERON:0000344!5.34e-19!15;UBERON:0001242!9.84e-17!13;UBERON:0000060!9.84e-17!13;UBERON:0001262!9.84e-17!13;UBERON:0004786!9.84e-17!13;UBERON:0004923!6.45e-13!24;UBERON:0003350!1.85e-11!9;UBERON:0004808!1.85e-11!9;UBERON:0001277!1.85e-11!9;UBERON:0000485!6.03e-09!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.09e-60,31;UBERON:0005409,5.12e-43,47;UBERON:0000344,2.35e-32,15;UBERON:0001242,2.43e-28,13;UBERON:0001262,2.43e-28,13;UBERON:0004786,2.43e-28,13;UBERON:0004923,1.90e-21,24;UBERON:0003350,5.17e-19,9;UBERON:0004808,5.17e-19,9;UBERON:0001277,5.17e-19,9;UBERON:0001007,1.04e-15,116;UBERON:0001555,1.04e-15,116;UBERON:0007026,1.04e-15,116;UBERON:0004119,2.56e-15,118;UBERON:0000925,2.56e-15,118;UBERON:0006595,2.56e-15,118;UBERON:0000485,2.96e-15,11;UBERON:0004921,1.19e-13,114;UBERON:0002108,2.08e-10,4;UBERON:0000331,2.32e-08,3;UBERON:0002116,2.32e-08,3;UBERON:0001204,2.32e-08,3;UBERON:0001168,2.32e-08,3 | |||
|phase1_expression=0,10.1202868215415,10.9199817453489,15.4256747766483,15.0268718983904,2.68606835059024,2.80335168714631,0.774739940649458,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,9.91953021319121,6.8822784320151,14.3557991028755,7.32295393470427,7.11055067863434,29.453630015738,17.8941392129551,6.87364583031445,0,0,0,1.73310971850765,3.65716219788683,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0,0,0,11.1835056730873,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1380584599145,16.3959351331397,0,0.464473343720877,2.70621668776396,8.87407508342707,13.1203045868473,11.9842144450912,13.2868137232463,14.987604879885,9.29940272560997,9.74886713001639,10.7230247915516,5.39291645192533,10.3746263939853,14.7364542208232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,10.2018292820448,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.86404272657441,0,1.74690050996942,0,0,0,13.2207272757629,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0,0.505394423527595,0.50695859978048,0.565879024158229,0.842773567228942,0.704276676453562,0.229741875822453,0.476293691283074,0.811190281613988,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.658765662907314,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.711810108745045,0.394017929502254,0,0.619747364743864,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0 | |phase1_expression=0,10.1202868215415,10.9199817453489,15.4256747766483,15.0268718983904,2.68606835059024,2.80335168714631,0.774739940649458,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,9.91953021319121,6.8822784320151,14.3557991028755,7.32295393470427,7.11055067863434,29.453630015738,17.8941392129551,6.87364583031445,0,0,0,1.73310971850765,3.65716219788683,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0,0,0,11.1835056730873,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1380584599145,16.3959351331397,0,0.464473343720877,2.70621668776396,8.87407508342707,13.1203045868473,11.9842144450912,13.2868137232463,14.987604879885,9.29940272560997,9.74886713001639,10.7230247915516,5.39291645192533,10.3746263939853,14.7364542208232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,10.2018292820448,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.86404272657441,0,1.74690050996942,0,0,0,13.2207272757629,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0,0.505394423527595,0.50695859978048,0.565879024158229,0.842773567228942,0.704276676453562,0.229741875822453,0.476293691283074,0.811190281613988,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.658765662907314,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.711810108745045,0.394017929502254,0,0.619747364743864,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0 | ||
|short_description=p2@Tubal3 | |short_description=p2@Tubal3 | ||
}} | }} |
Latest revision as of 14:11, 1 October 2015
Short description: | p2@Tubal3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tubal3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -10bp_to_ENSMUST00000021639, NM_001033879, uc007pjg.2_5end |
EntrezGene: | Tubal3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.17e-19 | 9 |
epithelial cell of alimentary canal | 5.17e-19 | 9 |
brush border epithelial cell | 6.63e-14 | 6 |
gut absorptive cell | 6.63e-14 | 6 |
enterocyte | 6.63e-14 | 6 |
columnar/cuboidal epithelial cell | 8.11e-12 | 7 |
epithelial cell | 9.33e-11 | 25 |
endo-epithelial cell | 9.47e-11 | 15 |
M cell of gut | 1.07e-07 | 3 |
endodermal cell | 1.16e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.09e-60 | 31 |
gastrointestinal system | 5.12e-43 | 47 |
mucosa | 2.35e-32 | 15 |
intestinal mucosa | 2.43e-28 | 13 |
wall of intestine | 2.43e-28 | 13 |
gastrointestinal system mucosa | 2.43e-28 | 13 |
organ component layer | 1.90e-21 | 24 |
epithelium of mucosa | 5.17e-19 | 9 |
gastrointestinal system epithelium | 5.17e-19 | 9 |
intestinal epithelium | 5.17e-19 | 9 |
digestive system | 1.04e-15 | 116 |
digestive tract | 1.04e-15 | 116 |
primitive gut | 1.04e-15 | 116 |
endoderm-derived structure | 2.56e-15 | 118 |
endoderm | 2.56e-15 | 118 |
presumptive endoderm | 2.56e-15 | 118 |
simple columnar epithelium | 2.96e-15 | 11 |
subdivision of digestive tract | 1.19e-13 | 114 |
small intestine | 2.08e-10 | 4 |
ileal mucosa | 2.32e-08 | 3 |
ileum | 2.32e-08 | 3 |
mucosa of small intestine | 2.32e-08 | 3 |
wall of small intestine | 2.32e-08 | 3 |