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FFCP PHASE1:Mm9::chr18:61173722..61173753,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=240332
|EntrezGene=240332
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6PGE7
|UniProt=Q6PGE7
|association_with_transcript=99bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end
|association_with_transcript=99bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end
|cluster_id=chr18:61173722..61173753,-
|description=CAGE_peak_2_at_Slc6a7_5end
|description=CAGE_peak_2_at_Slc6a7_5end
|id=chr18:61173722..61173753,-
|id=chr18:61173722..61173753,-
|ontology_enrichment_celltype=CL:0000117!3.83e-09!23;CL:0000337!3.83e-09!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33
|ontology_enrichment_celltype=CL:0000117!3.83e-09!23;CL:0000337!3.83e-09!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-14,23;CL:0000337,1.54e-14,23;CL:0000540,7.89e-11,33;CL:0000047,7.89e-11,33;CL:0000031,7.89e-11,33;CL:0000404,7.89e-11,33;CL:0000393,2.32e-08,39;CL:0000211,2.32e-08,39;CL:0002319,4.04e-07,43;CL:0000221,7.56e-07,44;CL:0000133,7.56e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.18e-16!73;UBERON:0005743!8.18e-16!73;UBERON:0000073!7.82e-15!75;UBERON:0001016!7.82e-15!75;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0002020!1.62e-13!34;UBERON:0000955!4.33e-13!50;UBERON:0006238!4.33e-13!50;UBERON:0002616!2.29e-12!49;UBERON:0002791!1.90e-10!29;UBERON:0003528!1.90e-10!29;UBERON:0001893!1.90e-10!29;UBERON:0000033!8.26e-10!63;UBERON:0004121!2.60e-09!102;UBERON:0000924!2.60e-09!102;UBERON:0006601!2.60e-09!102;UBERON:0003080!3.93e-09!40;UBERON:0002021!9.96e-09!10;UBERON:0000411!9.96e-09!10;UBERON:0001950!9.96e-09!10;UBERON:0002346!1.29e-08!71;UBERON:0003075!1.29e-08!71;UBERON:0007284!1.29e-08!71;UBERON:0002780!1.74e-08!39;UBERON:0001890!1.74e-08!39;UBERON:0006240!1.74e-08!39;UBERON:0003056!7.80e-08!49;UBERON:0007811!2.43e-07!86;UBERON:0002420!6.00e-07!8;UBERON:0007245!6.00e-07!8;UBERON:0010009!6.00e-07!8;UBERON:0010011!6.00e-07!8;UBERON:0000454!6.00e-07!8;UBERON:0002619!8.09e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-26,54;UBERON:0001017,8.52e-26,73;UBERON:0001016,9.05e-25,75;UBERON:0001049,2.50e-23,52;UBERON:0005068,2.50e-23,52;UBERON:0006241,2.50e-23,52;UBERON:0007135,2.50e-23,52;UBERON:0002020,1.46e-21,34;UBERON:0004121,4.22e-19,95;UBERON:0000924,4.22e-19,95;UBERON:0006601,4.22e-19,95;UBERON:0000955,1.57e-18,47;UBERON:0006238,1.57e-18,47;UBERON:0002346,2.60e-18,64;UBERON:0003075,2.60e-18,64;UBERON:0007284,2.60e-18,64;UBERON:0002616,2.48e-17,46;UBERON:0003528,2.83e-16,29;UBERON:0002791,2.83e-16,29;UBERON:0001893,2.83e-16,29;UBERON:0010371,7.32e-16,73;UBERON:0003080,1.16e-14,40;UBERON:0002021,5.08e-14,10;UBERON:0000411,5.08e-14,10;UBERON:0001950,5.08e-14,10;UBERON:0002780,1.53e-13,39;UBERON:0001890,1.53e-13,39;UBERON:0006240,1.53e-13,39;UBERON:0003056,8.61e-12,49;UBERON:0002420,6.16e-11,8;UBERON:0007245,6.16e-11,8;UBERON:0010009,6.16e-11,8;UBERON:0010011,6.16e-11,8;UBERON:0000454,6.16e-11,8;UBERON:0003076,7.63e-10,12;UBERON:0003057,7.63e-10,12;UBERON:0010314,1.03e-09,92;UBERON:0002619,7.28e-09,17;UBERON:0011216,8.76e-09,194;UBERON:0000956,3.99e-08,21;UBERON:0001869,3.99e-08,21;UBERON:0000203,3.99e-08,21;UBERON:0002240,5.54e-08,6;UBERON:0005174,5.54e-08,6;UBERON:0001137,5.54e-08,6;UBERON:0002950,3.37e-07,4;UBERON:0001891,3.37e-07,4;UBERON:0009616,3.37e-07,4;UBERON:0010286,3.37e-07,4;UBERON:0001948,6.15e-07,5;UBERON:0002315,6.15e-07,5;UBERON:0000369,8.30e-07,5;UBERON:0002435,8.30e-07,5;UBERON:0000204,8.30e-07,5;UBERON:0010082,8.30e-07,5
|phase1_expression=0,0,0,0,0.500895729946347,1.34303417529512,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.665191531965914,0,0,0,1.44425809875637,0.997407872150954,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,7.40587370980846,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0,0,0,8.2838785477103,9.93908434282261,0.244981598429908,0.191690942036473,0,19.82085857989,18.0039146700115,13.8245879930619,4.48413378282659,5.12330804173494,5.2091337055676,11.4465029590566,14.069065250792,12.6822545654752,10.0173719061047,6.40672563595963,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0.722996784599558,0,0,0,0,0,1.75668478206928,2.30391377494801,2.55457055208591,0,0,0,16.3271796951257,7.77751024791665,1.7591609295801,13.210648334613,10.2286182932132,16.4152555202052,12.1680947300818,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,11.7762371195911,0.720332286654991,0.660837565967596,1.32225283331772,0,0,0.38660238396628,0.403367049246685,2.44615848229357,0.760902504450237,0.949058123089023,0.658795818896044,2.01068167040216,1.39269530428806,1.55971269695296,0.898819408654221,1.29682829924817,2.78797782556114,0.189667900953082,0,0,0.203651327845314,0,0.280543279561274,0.505892296994058,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2752377592187,8.79087649441524,0,0,0,0,0,0.716906393857656,1.11399337041197,1.41538265394416,0.404810701674894,0,0.395287777946524,17.3513510867776,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,1.6488625294148,0,0,0,0.656563598980245,2.33184669303881,4.45020724825223,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.779663045918019,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,7.34177395402186,8.74617949363636,7.44764167471216,10.1393377582776,10.9613203163303,9.82012066606611,6.75022500231806,12.6089936902782,10.4222754066367,13.4617681055473,0,0,0.170733605754134,0,0,1.83843508450014,0.888986911206461,0.412070114477788,1.28367683836726,1.51618327058278,0.760437899670719,0.377252682772152,0.842773567228942,0.832326981263301,0.689225627467359,1.42888107384922,0.695305955669133,0.38581844092741,0,0.588795680537589,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.846984423737976,0.676916863133412,0.548783918618318,0.526139422875686,1.08643291076689,1.12228454331548,1.06771516311757,0.689531376628944,1.22769312950907,1.39443157067369,0.964533054905707,1.49886346762768,0.701794825336225,1.28922632428979,0.956441660344217,0.441182838239031,0
|phase1_expression=0,0,0,0,0.500895729946347,1.34303417529512,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.665191531965914,0,0,0,1.44425809875637,0.997407872150954,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,7.40587370980846,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0,0,0,8.2838785477103,9.93908434282261,0.244981598429908,0.191690942036473,0,19.82085857989,18.0039146700115,13.8245879930619,4.48413378282659,5.12330804173494,5.2091337055676,11.4465029590566,14.069065250792,12.6822545654752,10.0173719061047,6.40672563595963,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0.722996784599558,0,0,0,0,0,1.75668478206928,2.30391377494801,2.55457055208591,0,0,0,16.3271796951257,7.77751024791665,1.7591609295801,13.210648334613,10.2286182932132,16.4152555202052,12.1680947300818,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,11.7762371195911,0.720332286654991,0.660837565967596,1.32225283331772,0,0,0.38660238396628,0.403367049246685,2.44615848229357,0.760902504450237,0.949058123089023,0.658795818896044,2.01068167040216,1.39269530428806,1.55971269695296,0.898819408654221,1.29682829924817,2.78797782556114,0.189667900953082,0,0,0.203651327845314,0,0.280543279561274,0.505892296994058,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2752377592187,8.79087649441524,0,0,0,0,0,0.716906393857656,1.11399337041197,1.41538265394416,0.404810701674894,0,0.395287777946524,17.3513510867776,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,1.6488625294148,0,0,0,0.656563598980245,2.33184669303881,4.45020724825223,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.779663045918019,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,7.34177395402186,8.74617949363636,7.44764167471216,10.1393377582776,10.9613203163303,9.82012066606611,6.75022500231806,12.6089936902782,10.4222754066367,13.4617681055473,0,0,0.170733605754134,0,0,1.83843508450014,0.888986911206461,0.412070114477788,1.28367683836726,1.51618327058278,0.760437899670719,0.377252682772152,0.842773567228942,0.832326981263301,0.689225627467359,1.42888107384922,0.695305955669133,0.38581844092741,0,0.588795680537589,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.846984423737976,0.676916863133412,0.548783918618318,0.526139422875686,1.08643291076689,1.12228454331548,1.06771516311757,0.689531376628944,1.22769312950907,1.39443157067369,0.964533054905707,1.49886346762768,0.701794825336225,1.28922632428979,0.956441660344217,0.441182838239031,0
|short_description=p2@Slc6a7
|short_description=p2@Slc6a7
}}
}}

Latest revision as of 13:46, 1 October 2015

Short description:p2@Slc6a7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc6a7_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 99bp_to_ENSMUST00000025520, NM_201353, uc008fbi.1_5end
EntrezGene:Slc6a7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Slc6a7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.33
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E811.78
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A38.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.54e-1423
neuroblast (sensu Vertebrata)1.54e-1423
neuron7.89e-1133
neuronal stem cell7.89e-1133
neuroblast7.89e-1133
electrically signaling cell7.89e-1133
electrically responsive cell2.32e-0839
electrically active cell2.32e-0839
neural cell4.04e-0743
ectodermal cell7.56e-0744
neurectodermal cell7.56e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.01e-2654
central nervous system8.52e-2673
nervous system9.05e-2575
neural tube2.50e-2352
neural rod2.50e-2352
future spinal cord2.50e-2352
neural keel2.50e-2352
gray matter1.46e-2134
ectoderm-derived structure4.22e-1995
ectoderm4.22e-1995
presumptive ectoderm4.22e-1995
brain1.57e-1847
future brain1.57e-1847
neurectoderm2.60e-1864
neural plate2.60e-1864
presumptive neural plate2.60e-1864
regional part of brain2.48e-1746
brain grey matter2.83e-1629
regional part of telencephalon2.83e-1629
telencephalon2.83e-1629
ecto-epithelium7.32e-1673
anterior neural tube1.16e-1440
occipital lobe5.08e-1410
visual cortex5.08e-1410
neocortex5.08e-1410
regional part of forebrain1.53e-1339
forebrain1.53e-1339
future forebrain1.53e-1339
pre-chordal neural plate8.61e-1249
basal ganglion6.16e-118
nuclear complex of neuraxis6.16e-118
aggregate regional part of brain6.16e-118
collection of basal ganglia6.16e-118
cerebral subcortex6.16e-118
posterior neural tube7.63e-1012
chordal neural plate7.63e-1012
structure with developmental contribution from neural crest1.03e-0992
regional part of cerebral cortex7.28e-0917
organ system subdivision8.76e-09194
cerebral cortex3.99e-0821
cerebral hemisphere3.99e-0821
pallium3.99e-0821
spinal cord5.54e-086
dorsal region element5.54e-086
dorsum5.54e-086
regional part of midbrain3.37e-074
midbrain3.37e-074
presumptive midbrain3.37e-074
midbrain neural tube3.37e-074
regional part of spinal cord6.15e-075
gray matter of spinal cord6.15e-075
corpus striatum8.30e-075
striatum8.30e-075
ventral part of telencephalon8.30e-075
future corpus striatum8.30e-075
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