Personal tools

FFCP PHASE1:Mm9::chr5:106129777..106129854,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231549
|EntrezGene=231549
|HGNC=
|HGNC=
|MCL_coexpression_id=981
|TSSclassifier=NA
|UniProt=Q8BGR2
|UniProt=Q8BGR2
|association_with_transcript=0bp_to_ENSMUST00000120847,ENSMUST00000140608,NM_178701,uc008ylh.2_5end
|association_with_transcript=0bp_to_ENSMUST00000120847,ENSMUST00000140608,NM_178701,uc008ylh.2_5end
|cluster_id=chr5:106129777..106129854,+
|description=CAGE_peak_2_at_Lrrc8d_5end
|description=CAGE_peak_2_at_Lrrc8d_5end
|id=chr5:106129777..106129854,+
|id=chr5:106129777..106129854,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.15e-16!59;UBERON:0000160!5.29e-16!43;UBERON:0001007!1.97e-14!128;UBERON:0001555!1.97e-14!128;UBERON:0007026!1.97e-14!128;UBERON:0004119!2.29e-14!130;UBERON:0000925!2.29e-14!130;UBERON:0006595!2.29e-14!130;UBERON:0004921!1.68e-13!126;UBERON:0004185!1.68e-13!126;UBERON:0004923!2.20e-08!24;UBERON:0000344!2.38e-08!15;UBERON:0005172!3.67e-08!49;UBERON:0005173!3.67e-08!49;UBERON:0002417!3.67e-08!49;UBERON:0000916!3.67e-08!49;UBERON:0002108!7.67e-08!16;UBERON:0000466!8.55e-08!79;UBERON:0005177!2.35e-07!85;UBERON:0001242!2.46e-07!13;UBERON:0000060!2.46e-07!13;UBERON:0001262!2.46e-07!13;UBERON:0004786!2.46e-07!13;UBERON:0002365!3.70e-07!25;UBERON:0002330!3.70e-07!25;UBERON:0003104!9.61e-07!131;UBERON:0009142!9.61e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.75e-11,47;UBERON:0000160,3.01e-11,31;UBERON:0005177,2.61e-10,79;UBERON:0000344,4.50e-09,15;UBERON:0002100,4.58e-09,90;UBERON:0004923,1.09e-08,24;UBERON:0005172,2.01e-08,49;UBERON:0005173,2.01e-08,49;UBERON:0002417,2.01e-08,49;UBERON:0000916,2.01e-08,49;UBERON:0001007,5.33e-08,116;UBERON:0001555,5.33e-08,116;UBERON:0007026,5.33e-08,116;UBERON:0001242,5.95e-08,13;UBERON:0001262,5.95e-08,13;UBERON:0004786,5.95e-08,13;UBERON:0004119,9.34e-08,118;UBERON:0000925,9.34e-08,118;UBERON:0006595,9.34e-08,118;UBERON:0002365,2.73e-07,25;UBERON:0002330,2.73e-07,25;UBERON:0004921,2.85e-07,114
|phase1_expression=0.960893082628764,22.6834014965585,15.0149748998547,41.1351327377289,30.5546395267272,6.04365378882803,8.1764424208434,3.22808308603941,3.09735188733667,5.61754863172784,1.54096171402954,2.55270908785077,1.02720437958723,0.34968160967599,1.33243904726265,2.22722794128809,0.699561878128147,2.5236973228659,2.19383093769182,2.54633791078818,3.91199134694921,0.794327609607082,0.522399578277871,16.1592347021341,14.9116032693661,18.3754228516806,8.61523992318149,8.61884930743556,14.8218267175972,9.07308467135751,7.98229838359097,1.90509202037889,2.46025915033828,0,8.08784535303569,5.65197794218874,6.73758875665818,30.9713406745312,17.1893775795236,29.3173296625327,80.587713860249,51.9114568568419,52.4351181273646,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,6.71130424230945,1.45072428402269,2.01656279485478,0.257259436035947,0,0,0,0,0,0,0,1.3498495759221,0,0,1.49800055259202,0.768436610643109,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,1.3959149950069,0,0.15279824777681,0,0,0,2.49896437999507,1.43585964202892,2.02905142091174,11.185510400758,6.11974200336975,22.6675340487883,30.5394916200404,14.7848872742121,9.55022056895913,0,0,0,1.83096445709685,0,0,0,0.865964164044856,0,0.505524445014783,13.5878816865681,4.14300613835475,6.82833839698194,1.21439728736295,3.34912026143355,4.61230994512117,5.57673770044703,3.88042733547826,10.053327306374,4.20231445148436,2.02439099687876,11.4999371753484,0.970601099684455,4.85851340612866,2.42437626567611,11.1835056730873,0.585561594023094,0.41889341362691,25.034791410442,1.1981512450592,1.79970819298022,1.39777249780371,0.748953197024114,0.457500602818626,0,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,2.73695335342205,4.29628689337247,24.6216971387175,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.468508622798644,7.76110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.823128545631774,0.995171334092466,0.702213187313235,2.05878325691772,1.70498099637356,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0.210289948564127,0.102904612379284,50.5540737965211,30.9407162996347,0.426576501070468,0.464473343720877,0.77320476793256,1.81515172161008,1.55664630691409,1.71203063501303,23.2519240156811,5.43506550589236,5.02670417600539,6.96347652144028,8.57841983324129,21.5716658077013,30.2593269824572,18.9184209591649,0.379335801906163,0.799739588268102,0,1.22190796707189,3.29719228184964,1.05203729835478,5.24863258131335,11.513591542409,13.1878931386755,11.2291419168838,9.19003143970162,0.500535317148282,0.196558995113203,0.674586337154561,1.21716072833102,1.68824011826692,1.78238096246994,4.02774592431135,3.24270453550071,8.23684239564244,5.75072826109418,6.69853705803306,11.8574315783533,23.2372567711343,27.8065990958964,15.9206362049911,3.69506380333209,0.189491411770485,0.162964976442026,0.339490171550376,1.17345124144251,1.34005005953453,1.42826184531608,1.75620283072019,1.26108115284953,0.44292937929755,1.43509291791738,3.60499292374624,6.04397436530635,3.47157740595628,3.01582567878545,0.54390568381871,33.4399705652945,15.1765210467603,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0.790575555893047,0,1.70328102249922,0.890328018336276,0.325773918707152,2.63952196756057,18.5843193675948,2.6705869977048,2.41858845571801,6.60117779145643,11.5167738223501,11.3751004739253,6.46070732920553,5.08947221268508,6.41695281092498,26.8631244245444,35.8423269154996,37.1287955693473,11.9153862013826,0.900305470156551,0.776152102696527,0.643011105094777,2.6601035046341,3.0322698992352,2.96188237083818,2.74018454203139,0.938686832254841,1.48282449604674,0.441056796109924,0.98931751764888,1.61464426695906,1.62844897306021,1.19372344003136,1.31312719796049,20.1121777274597,0,4.27177201994632,2.68302928352189,1.66675074632741,3.01389531207506,2.1871076435364,2.0590035588587,2.03974115992626,2.23922323717853,2.21119958087078,2.86401185404534,0.316335993581135,1.62655573701479,0.648032044930808,1.25452977608681,2.18362563746178,2.02296519577231,2.81021749466142,2.6175594198403,4.53652406521275,18.0188400795208,0,1.34564891439581,1.15820943319968,0.388902376688095,1.03327858782185,1.520605129417,0.58678619322877,1.8228613878153,2.20204623293993,2.17425708743405,2.59227005632079,0.632022241256357,0.608175645870493,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,0.600977247599844,0.295379054349154,0.706765149637033,0.381034033274999,0.705783295957884,0.584747284438515,0.481059208201647,0.467507608726276,0.906921534460845,2.66383144048878,0.807424709485281,1.00730769818447,0.386379188064381,0.187682475451182,3.84618410961257,1.50057865355346,3.51100472824754,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0,1.21553358534147,0.209613162627982,0,1.55572709461131,1.44224540067226,0.320919209591815,1.01078884705519,1.52087579934144,1.13175804831646,1.03005658216871,1.40855335290712,1.7230640686684,1.42888107384922,1.50649623728312,0.964546102318525,0.824171801606613,1.32479028120958,2.74295401908332,1.59728225543404,1.43061713968393,1.30811774969096,1.50575008664529,0.930760686808441,2.0122077016005,0.789209134313529,1.08643291076689,1.68342681497322,0.830445126869219,1.28055827088233,1.22769312950907,1.08455788830176,0.964533054905707,0.499621155875892,1.16965804222704,2.57845264857958,0.191288332068843,0.441182838239031,1.39120701372253
|phase1_expression=0.960893082628764,22.6834014965585,15.0149748998547,41.1351327377289,30.5546395267272,6.04365378882803,8.1764424208434,3.22808308603941,3.09735188733667,5.61754863172784,1.54096171402954,2.55270908785077,1.02720437958723,0.34968160967599,1.33243904726265,2.22722794128809,0.699561878128147,2.5236973228659,2.19383093769182,2.54633791078818,3.91199134694921,0.794327609607082,0.522399578277871,16.1592347021341,14.9116032693661,18.3754228516806,8.61523992318149,8.61884930743556,14.8218267175972,9.07308467135751,7.98229838359097,1.90509202037889,2.46025915033828,0,8.08784535303569,5.65197794218874,6.73758875665818,30.9713406745312,17.1893775795236,29.3173296625327,80.587713860249,51.9114568568419,52.4351181273646,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,6.71130424230945,1.45072428402269,2.01656279485478,0.257259436035947,0,0,0,0,0,0,0,1.3498495759221,0,0,1.49800055259202,0.768436610643109,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,1.3959149950069,0,0.15279824777681,0,0,0,2.49896437999507,1.43585964202892,2.02905142091174,11.185510400758,6.11974200336975,22.6675340487883,30.5394916200404,14.7848872742121,9.55022056895913,0,0,0,1.83096445709685,0,0,0,0.865964164044856,0,0.505524445014783,13.5878816865681,4.14300613835475,6.82833839698194,1.21439728736295,3.34912026143355,4.61230994512117,5.57673770044703,3.88042733547826,10.053327306374,4.20231445148436,2.02439099687876,11.4999371753484,0.970601099684455,4.85851340612866,2.42437626567611,11.1835056730873,0.585561594023094,0.41889341362691,25.034791410442,1.1981512450592,1.79970819298022,1.39777249780371,0.748953197024114,0.457500602818626,0,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,2.73695335342205,4.29628689337247,24.6216971387175,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.468508622798644,7.76110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.823128545631774,0.995171334092466,0.702213187313235,2.05878325691772,1.70498099637356,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0.210289948564127,0.102904612379284,50.5540737965211,30.9407162996347,0.426576501070468,0.464473343720877,0.77320476793256,1.81515172161008,1.55664630691409,1.71203063501303,23.2519240156811,5.43506550589236,5.02670417600539,6.96347652144028,8.57841983324129,21.5716658077013,30.2593269824572,18.9184209591649,0.379335801906163,0.799739588268102,0,1.22190796707189,3.29719228184964,1.05203729835478,5.24863258131335,11.513591542409,13.1878931386755,11.2291419168838,9.19003143970162,0.500535317148282,0.196558995113203,0.674586337154561,1.21716072833102,1.68824011826692,1.78238096246994,4.02774592431135,3.24270453550071,8.23684239564244,5.75072826109418,6.69853705803306,11.8574315783533,23.2372567711343,27.8065990958964,15.9206362049911,3.69506380333209,0.189491411770485,0.162964976442026,0.339490171550376,1.17345124144251,1.34005005953453,1.42826184531608,1.75620283072019,1.26108115284953,0.44292937929755,1.43509291791738,3.60499292374624,6.04397436530635,3.47157740595628,3.01582567878545,0.54390568381871,33.4399705652945,15.1765210467603,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0.790575555893047,0,1.70328102249922,0.890328018336276,0.325773918707152,2.63952196756057,18.5843193675948,2.6705869977048,2.41858845571801,6.60117779145643,11.5167738223501,11.3751004739253,6.46070732920553,5.08947221268508,6.41695281092498,26.8631244245444,35.8423269154996,37.1287955693473,11.9153862013826,0.900305470156551,0.776152102696527,0.643011105094777,2.6601035046341,3.0322698992352,2.96188237083818,2.74018454203139,0.938686832254841,1.48282449604674,0.441056796109924,0.98931751764888,1.61464426695906,1.62844897306021,1.19372344003136,1.31312719796049,20.1121777274597,0,4.27177201994632,2.68302928352189,1.66675074632741,3.01389531207506,2.1871076435364,2.0590035588587,2.03974115992626,2.23922323717853,2.21119958087078,2.86401185404534,0.316335993581135,1.62655573701479,0.648032044930808,1.25452977608681,2.18362563746178,2.02296519577231,2.81021749466142,2.6175594198403,4.53652406521275,18.0188400795208,0,1.34564891439581,1.15820943319968,0.388902376688095,1.03327858782185,1.520605129417,0.58678619322877,1.8228613878153,2.20204623293993,2.17425708743405,2.59227005632079,0.632022241256357,0.608175645870493,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,0.600977247599844,0.295379054349154,0.706765149637033,0.381034033274999,0.705783295957884,0.584747284438515,0.481059208201647,0.467507608726276,0.906921534460845,2.66383144048878,0.807424709485281,1.00730769818447,0.386379188064381,0.187682475451182,3.84618410961257,1.50057865355346,3.51100472824754,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0,1.21553358534147,0.209613162627982,0,1.55572709461131,1.44224540067226,0.320919209591815,1.01078884705519,1.52087579934144,1.13175804831646,1.03005658216871,1.40855335290712,1.7230640686684,1.42888107384922,1.50649623728312,0.964546102318525,0.824171801606613,1.32479028120958,2.74295401908332,1.59728225543404,1.43061713968393,1.30811774969096,1.50575008664529,0.930760686808441,2.0122077016005,0.789209134313529,1.08643291076689,1.68342681497322,0.830445126869219,1.28055827088233,1.22769312950907,1.08455788830176,0.964533054905707,0.499621155875892,1.16965804222704,2.57845264857958,0.191288332068843,0.441182838239031,1.39120701372253
|short_description=p2@Lrrc8d
|short_description=p2@Lrrc8d
}}
}}

Latest revision as of 13:46, 1 October 2015

Short description:p2@Lrrc8d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrc8d_5end
Coexpression cluster:MCL_coexpression_mm9:981
Association with transcript: 0bp_to_ENSMUST00000120847, ENSMUST00000140608, NM_178701, uc008ylh.2_5end
EntrezGene:Lrrc8d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrc8d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.91
GP2+ M cell, pool1.CNhs13228.11845-124H918.38
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B914.82
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G980.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H251.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H452.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.59
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F55.58
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I310.05
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G424.62
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I350.55
intestine, adult.CNhs10496.178-9A330.94
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D123.25
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E330.26
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I111.51
kidney, neonate N25.CNhs11122.1353-25F313.19
kidney, neonate N30.CNhs11203.1385-42H111.23
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A323.24
liver, neonate N25.CNhs11198.1368-26H127.81
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B633.44
mammary gland, adult pregnant day19.CNhs10476.588-5H215.18
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B626.86
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I120.11
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.75e-1147
intestine3.01e-1131
trunk region element2.61e-1079
mucosa4.50e-0915
trunk4.58e-0990
organ component layer1.09e-0824
abdomen element2.01e-0849
abdominal segment element2.01e-0849
abdominal segment of trunk2.01e-0849
abdomen2.01e-0849
digestive system5.33e-08116
digestive tract5.33e-08116
primitive gut5.33e-08116
intestinal mucosa5.95e-0813
wall of intestine5.95e-0813
gastrointestinal system mucosa5.95e-0813
endoderm-derived structure9.34e-08118
endoderm9.34e-08118
presumptive endoderm9.34e-08118
exocrine gland2.73e-0725
exocrine system2.73e-0725
subdivision of digestive tract2.85e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:106129777..106129854,%2B&oldid=4305762"