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FFCP PHASE1:Mm9::chr15:98764953..98765017,-: Difference between revisions

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(Created page with "{{FFCP |id=chr15:98764953..98765017,- |short_description=p2@Gm5620,p2@Tuba1b |description=CAGE_peak_2_at_Gm5620_5end,CAGE_peak_2_at_Tuba1b_5end |association_with_transcrip...")
 
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{{FFCP
{{FFCP
|id=chr15:98764953..98765017,-
|DHSsupport=NA
|short_description=p2@Gm5620,p2@Tuba1b
|DPIdataset=NA
|description=CAGE_peak_2_at_Gm5620_5end,CAGE_peak_2_at_Tuba1b_5end
|association_with_transcript=0bp_to_ENSMUST00000077577_5end
|EntrezGene=22143,434428
|EntrezGene=22143,434428
|HGNC=
|HGNC=
|MCL_coexpression_id=482
|TSSclassifier=NA
|UniProt=P05213
|UniProt=P05213
|association_with_transcript=0bp_to_ENSMUST00000077577_5end
|cluster_id=chr15:98764953..98765017,-
|description=CAGE_peak_2_at_Gm5620_5end,CAGE_peak_2_at_Tuba1b_5end
|id=chr15:98764953..98765017,-
|ontology_enrichment_celltype=CL:0000117!1.86e-11!23;CL:0000337!1.86e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-11,23;CL:0000337,1.53e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.16e-24!94;UBERON:0007811!8.61e-23!86;UBERON:0000955!3.84e-16!50;UBERON:0006238!3.84e-16!50;UBERON:0000033!4.82e-16!63;UBERON:0001049!6.63e-16!52;UBERON:0005068!6.63e-16!52;UBERON:0006241!6.63e-16!52;UBERON:0007135!6.63e-16!52;UBERON:0002616!1.36e-15!49;UBERON:0003056!1.33e-14!49;UBERON:0002020!2.21e-14!34;UBERON:0001017!5.71e-14!73;UBERON:0005743!5.71e-14!73;UBERON:0003080!1.02e-13!40;UBERON:0002791!1.17e-13!29;UBERON:0003528!1.17e-13!29;UBERON:0001893!1.17e-13!29;UBERON:0002780!2.34e-13!39;UBERON:0001890!2.34e-13!39;UBERON:0006240!2.34e-13!39;UBERON:0000073!6.50e-13!75;UBERON:0001016!6.50e-13!75;UBERON:0002346!4.22e-12!71;UBERON:0003075!4.22e-12!71;UBERON:0007284!4.22e-12!71;UBERON:0004121!1.18e-10!102;UBERON:0000924!1.18e-10!102;UBERON:0006601!1.18e-10!102;UBERON:0000956!1.84e-09!21;UBERON:0001869!1.84e-09!21;UBERON:0000203!1.84e-09!21;UBERON:0000064!2.93e-08!99;UBERON:0002619!4.93e-07!17;UBERON:0004177!8.00e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-16,54;UBERON:0001049,4.99e-16,52;UBERON:0005068,4.99e-16,52;UBERON:0006241,4.99e-16,52;UBERON:0007135,4.99e-16,52;UBERON:0002346,2.42e-15,64;UBERON:0003075,2.42e-15,64;UBERON:0007284,2.42e-15,64;UBERON:0000955,3.08e-15,47;UBERON:0006238,3.08e-15,47;UBERON:0003056,1.03e-14,49;UBERON:0002616,1.08e-14,46;UBERON:0002020,1.72e-14,34;UBERON:0010371,3.14e-14,73;UBERON:0003080,8.00e-14,40;UBERON:0003528,9.23e-14,29;UBERON:0002791,9.23e-14,29;UBERON:0001893,9.23e-14,29;UBERON:0001017,1.07e-13,73;UBERON:0002780,1.85e-13,39;UBERON:0001890,1.85e-13,39;UBERON:0006240,1.85e-13,39;UBERON:0001016,1.53e-12,75;UBERON:0004121,1.73e-12,95;UBERON:0000924,1.73e-12,95;UBERON:0006601,1.73e-12,95;UBERON:0000956,1.57e-09,21;UBERON:0001869,1.57e-09,21;UBERON:0000203,1.57e-09,21;UBERON:0010314,5.83e-09,92;UBERON:0000153,1.37e-07,43;UBERON:0004177,3.54e-07,29;UBERON:0005057,3.54e-07,29;UBERON:0002619,4.42e-07,17;UBERON:0007811,7.53e-07,36;UBERON:0002370,8.07e-07,23;UBERON:0000974,8.07e-07,23;UBERON:0004807,8.07e-07,23;UBERON:0005058,8.07e-07,23;UBERON:0003351,8.07e-07,23;UBERON:0009113,8.07e-07,23;UBERON:0003295,8.07e-07,23;UBERON:0009722,8.07e-07,23;UBERON:0005562,8.07e-07,23;UBERON:0007690,8.07e-07,23
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21,5.18454011264158,34.1292010278433,4.05450430580328,6.47079030138412,8.44485349355668,20.5880700017604,26.225938831127,25.0006535001535,27.6179415816459,21.0010215892147,28.7299661089349,28.8362889491364,34.3051740203929,26.7468919760116,21.7391038057718,2.26730383615211,2.21985953374065,1.79427713218951,1.84673078000486,2.31827512838629,0,1.46521299413812,4.28736758158132,0,15.8130515932779,15.1907328047368,9.73922372846974,13.9201077698387,7.53590771747707,9.82012066606611,13.5004500046361,11.2580300806055,11.7817026335893,12.4262474820437,14.7378033569531,14.7639203158381,10.4147499510022,7.77941494618541,12.367176595051,8.08911437180062,4.00044110042907,3.91466608753899,4.81378814387723,4.04315538822076,3.8021894983536,5.28153755881013,5.15028291084353,4.92993673517493,4.53740204749345,3.33405583898152,5.33067899346335,5.01563973205633,4.12085900803307,3.97437084362873,4.80016953339582,4.08194354166476,2.14592570952589,3.19762116591123,5.64656282491984,5.16149108139227,3.47563148458268,3.94604567156764,4.07412341537585,3.92799590160417,3.6776855618494,4.43270170690036,3.27384834535751,6.50734732981057,5.78719832943424,10.2422336954558,7.48581147025307,4.72716318906256,1.14772999241306,2.64709702943419,1.85494268496337
|phase1_expression=2.5623815536767,1.39590163055744,0,0,0,0.671517087647559,1.16806320297763,13.8161956082487,4.50523910885334,6.55380673701582,13.0125655851384,10.9287857823611,13.0112554747716,18.6205457152464,5.99597571268193,7.28910962603373,9.79386629379405,3.15462165358238,3.15363197293199,2.54633791078818,6.03807360072595,2.08510997521859,0.783599367416806,0.639969691173627,1.37645568640302,0,0,1.07735616342945,0.760093677825496,0.252030129759931,0.665191531965914,5.08024538767705,2.46025915033828,0,0.288851619751275,1.82858109894342,0.816677425049476,0.837063261473815,2.3440060335714,2.09409497589519,1.17646297606203,0,0,0.251793635951155,0.608261587317087,0.367093504323363,4.69434806608824,5.66865406589161,1.09843091367236,1.74986909166855,3.49966054063406,5.75010257459886,1.8456086666351,6.5282592781021,5.04140698713696,0.771778308107841,0.573066879877513,0.515672092277442,29.7405197463609,29.6234948392338,33.5930643858275,2.37191172448392,3.55717918444456,0,1.97773272513395,1.4209602298922,1.49800055259202,5.37905627450176,52.9853918896321,48.3321259227453,53.422540183251,6.28432165688368,4.41737081903227,54.9983688475144,52.71500906003,67.1029714225315,9.91042928994498,7.91661496128164,8.44835932909339,23.2119866405141,24.1527379110361,16.1483144872596,12.0048689570594,12.9435400307286,9.47349136216223,5.59794312399969,5.41012387036591,20.3175395949578,1.13589289999776,0.906858721281426,0.579728977403356,0.860423876981386,0,0.539703191637817,0,0.448026887097336,3.23022166303029,0.511290967734173,1.03914401841148,0,2.39433813620357,0,0,0,1.94841936910093,1.01343946190039,1.01104889002957,1.82694207550496,6.21450920753212,0.29688427812965,3.46970653532272,2.13125834818499,1.38369298353635,0.452167921657868,1.76383060703557,1.13099932196708,0.741584903203122,1.44599356919912,2.65383165584962,3.39710384889559,5.52103796150984,2.42437626567611,1.86391761218122,9.66176630138106,3.35114730901528,0.255457055208591,1.67741174308288,1.19980546198682,0.635351135365324,9.73639156131348,35.6850470198529,48.1256168592271,16.6871347384585,14.0643501531682,11.8439185398949,11.0324058886075,2.34230536855727,2.98576729464223,1.0108910337347,1.26265113531884,11.5807194236806,11.0353010128067,12.2442248267637,8.28876498096433,7.75616090325138,6.27757229395764,6.27801554550183,1.03481348295606,11.2095356325078,4.16033376369202,5.80638709741031,7.23345917010997,4.17070873838397,4.87553033131033,3.2925141825271,4.17971960318836,0,1.54408744268829,1.42081749697796,5.59239585845855,6.3322036194896,4.50155153652537,4.49814997611899,4.52557733019029,2.77680803197281,2.79040733700489,4.56064782379353,1.5179494507732,3.62031669809657,1.97000956894914,1.94565142910054,2.19299981137998,2.19550115291051,1.07365135008297,22.7113144449257,41.985081850748,0,0.793351699990633,2.34617075588757,3.0190767341857,2.96395161040815,1.4117846723634,2.00140239460383,2.66315876557583,0.949058123089023,0.988193728344065,0.754005626400808,2.98434708061726,0.779856348476481,0,0.648414149624083,0.597423819763102,6.2590407314517,2.17072173958485,2.25415471346161,3.05476991767971,1.74557238450863,2.17421041659988,1.64414996523069,1.03327103585722,0.941992367048249,0.493588655687202,0.296452627087149,11.8460025058427,8.45203678986773,10.5685192820881,11.1573066763677,9.16473207059184,5.34714288740982,6.04161888646702,3.24270453550071,3.56929837144506,0,0.744281895337007,0.624075346229121,1.01031551178845,0.179397413521912,0.482443521363367,1.66277871149944,6.06372517665551,3.7481944581666,2.37643120085263,2.34690248288502,2.34508760418542,0.952174563544055,0.975668239288994,1.57635144106191,2.43611158613652,0.956728611944923,1.3109065177259,0.518054945597687,1.01254341007058,1.50791283939272,0,1.47529281905711,0.827810238914197,9.47248480927973,6.32943107597897,1.80328439914343,0.504941854408746,0.94652465824877,1.56175497718655,1.93881057959519,0.955875191810208,0.891194696329576,1.13230612315533,2.42886421004937,1.46127928955656,1.18586333383957,17.6726724031994,1.41940085208269,3.5613120733451,2.76907830901079,1.15479086080775,0,3.15614827001476,3.62788268357701,1.13163047853539,1.18120757152309,0.307435147943927,0.775284879504663,1.45413491791002,1.78248689192361,0,0,0,2.7235168460303,6.84232157318979,8.66703181344455,4.28674070063185,2.12808280370728,3.74574516964348,2.46823530903181,3.95804433848979,1.64270195644597,1.90648863777438,0,3.95727007059552,5.9741837877485,6.27254419252821,5.252383136138,4.26766339337159,1.1659233465194,9.08583979851498,6.1513517087227,3.09580301944834,2.59272338317596,8.09984365120171,7.24479406921433,5.49067615695654,2.20971958992012,2.37917468950219,1.93479963326193,0.954670618015114,4.74503990371703,3.45643094115643,1.94409613479242,2.29997125615916,0.87345025498471,1.88810084938749,2.31429676030941,0.785267825952089,1.03691978633434,2.4853572523477,7.32800820289447,5.98066184175915,8.76929999422617,16.3338998209,8.78286799648571,6.58928889414035,4.5769323071844,7.03103678157331,7.34015410979976,8.21386010808421,5.18454011264158,34.1292010278433,4.05450430580328,6.47079030138412,8.44485349355668,20.5880700017604,26.225938831127,25.0006535001535,27.6179415816459,21.0010215892147,28.7299661089349,28.8362889491364,34.3051740203929,26.7468919760116,21.7391038057718,2.26730383615211,2.21985953374065,1.79427713218951,1.84673078000486,2.31827512838629,0,1.46521299413812,4.28736758158132,0,15.8130515932779,15.1907328047368,9.73922372846974,13.9201077698387,7.53590771747707,9.82012066606611,13.5004500046361,11.2580300806055,11.7817026335893,12.4262474820437,14.7378033569531,14.7639203158381,10.4147499510022,7.77941494618541,12.367176595051,8.08911437180062,4.00044110042907,3.91466608753899,4.81378814387723,4.04315538822076,3.8021894983536,5.28153755881013,5.15028291084353,4.92993673517493,4.53740204749345,3.33405583898152,5.33067899346335,5.01563973205633,4.12085900803307,3.97437084362873,4.80016953339582,4.08194354166476,2.14592570952589,3.19762116591123,5.64656282491984,5.16149108139227,3.47563148458268,3.94604567156764,4.07412341537585,3.92799590160417,3.6776855618494,4.43270170690036,3.27384834535751,6.50734732981057,5.78719832943424,10.2422336954558,7.48581147025307,4.72716318906256,1.14772999241306,2.64709702943419,1.85494268496337
|short_description=p2@Gm5620,p2@Tuba1b
}}
}}

Latest revision as of 13:28, 1 October 2015

Short description:p2@Gm5620, p2@Tuba1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gm5620_5end, CAGE_peak_2_at_Tuba1b_5end
Coexpression cluster:MCL_coexpression_mm9:482
Association with transcript: 0bp_to_ENSMUST00000077577_5end
EntrezGene:22143,434428
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gm5620p2@Tuba1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.01
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C329.74
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D552.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F548.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D953.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D255.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F252.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D667.10
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.32
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A49.74
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F148.13
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F211.84
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C912.24
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C67.76
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E822.71
hippocampus, neonate N00.CNhs11228.627-43G141.99
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F811.85
liver, embryo E13.CNhs10524.378-3H68.45
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D711.16
liver, embryo E16.CNhs10523.462-17F59.16
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H36.27
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G26.15
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D18.10
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C58.77
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D97.34
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B534.13
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I26.47
thymus, embryo E16.CNhs11002.456-26C58.44
thymus, embryo E17.CNhs10581.478-18C120.59
thymus, embryo E18.CNhs10595.1273-19G426.23
thymus, neonate N02.CNhs11181.1541-43F825.00
thymus, neonate N03.CNhs11137.2104-43C727.62
thymus, neonate N06.CNhs11197.681-26C421.00
thymus, neonate N07.CNhs11211.713-19D328.73
thymus, neonate N10.CNhs11194.748-24E428.84
thymus, neonate N20.CNhs11186.820-7A234.31
thymus, neonate N25.CNhs11125.1362-25G726.75
thymus, neonate N30.CNhs11132.1393-42G221.74
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I814.74
whole body, embryo E12.CNhs10587.857-27C914.76
whole body, embryo E13.CNhs10512.372-23H210.41
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B112.37
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.53e-1123
neuroblast (sensu Vertebrata)1.53e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.03e-1654
neural tube4.99e-1652
neural rod4.99e-1652
future spinal cord4.99e-1652
neural keel4.99e-1652
neurectoderm2.42e-1564
neural plate2.42e-1564
presumptive neural plate2.42e-1564
brain3.08e-1547
future brain3.08e-1547
pre-chordal neural plate1.03e-1449
regional part of brain1.08e-1446
gray matter1.72e-1434
ecto-epithelium3.14e-1473
anterior neural tube8.00e-1440
brain grey matter9.23e-1429
regional part of telencephalon9.23e-1429
telencephalon9.23e-1429
central nervous system1.07e-1373
regional part of forebrain1.85e-1339
forebrain1.85e-1339
future forebrain1.85e-1339
nervous system1.53e-1275
ectoderm-derived structure1.73e-1295
ectoderm1.73e-1295
presumptive ectoderm1.73e-1295
cerebral cortex1.57e-0921
cerebral hemisphere1.57e-0921
pallium1.57e-0921
structure with developmental contribution from neural crest5.83e-0992
anterior region of body1.37e-0743
hemopoietic organ3.54e-0729
immune organ3.54e-0729
regional part of cerebral cortex4.42e-0717
craniocervical region7.53e-0736
thymus8.07e-0723
neck8.07e-0723
respiratory system epithelium8.07e-0723
hemolymphoid system gland8.07e-0723
pharyngeal epithelium8.07e-0723
thymic region8.07e-0723
pharyngeal gland8.07e-0723
entire pharyngeal arch endoderm8.07e-0723
thymus primordium8.07e-0723
early pharyngeal endoderm8.07e-0723
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