FFCP PHASE1:Mm9::chr3:122598287..122598302,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:122598287..122598302,+ to FFCP PHASE1:Mm9::chr3:122598287..122598302,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14079 | |EntrezGene=14079 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P55050,Q53YP5 | |UniProt=P55050,Q53YP5 | ||
|association_with_transcript=-7bp_to_NM_007980,uc008rex.1_5end | |||
|cluster_id=chr3:122598287..122598302,+ | |||
|description=CAGE_peak_1_at_Fabp2_5end | |||
|id=chr3:122598287..122598302,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.37e-07!9;CL:0002251!1.37e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-08,9;CL:0002251,1.17e-08,9;CL:0000239,5.23e-07,6;CL:0000677,5.23e-07,6;CL:0000584,5.23e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.77e-18!59;UBERON:0000160!2.90e-17!43;UBERON:0004119!1.84e-14!130;UBERON:0000925!1.84e-14!130;UBERON:0006595!1.84e-14!130;UBERON:0001007!5.28e-14!128;UBERON:0001555!5.28e-14!128;UBERON:0007026!5.28e-14!128;UBERON:0004921!7.49e-13!126;UBERON:0004185!7.49e-13!126;UBERON:0000344!1.89e-12!15;UBERON:0001242!6.52e-11!13;UBERON:0000060!6.52e-11!13;UBERON:0001262!6.52e-11!13;UBERON:0004786!6.52e-11!13;UBERON:0004923!3.19e-09!24;UBERON:0003350!1.37e-07!9;UBERON:0004808!1.37e-07!9;UBERON:0001277!1.37e-07!9;UBERON:0009854!2.77e-07!23;UBERON:0009856!2.77e-07!23;UBERON:0002107!9.89e-07!22;UBERON:0007499!9.89e-07!22;UBERON:0006925!9.89e-07!22;UBERON:0009497!9.89e-07!22;UBERON:0000015!9.89e-07!22;UBERON:0002423!9.89e-07!22;UBERON:0006235!9.89e-07!22;UBERON:0008835!9.89e-07!22;UBERON:0003894!9.89e-07!22;UBERON:0004161!9.89e-07!22;UBERON:0008836!9.89e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.12e-26,31;UBERON:0005409,3.28e-26,47;UBERON:0000344,2.27e-14,15;UBERON:0001007,2.46e-14,116;UBERON:0001555,2.46e-14,116;UBERON:0007026,2.46e-14,116;UBERON:0004119,2.60e-14,118;UBERON:0000925,2.60e-14,118;UBERON:0006595,2.60e-14,118;UBERON:0004921,4.76e-13,114;UBERON:0001242,1.46e-12,13;UBERON:0001262,1.46e-12,13;UBERON:0004786,1.46e-12,13;UBERON:0004923,3.30e-10,24;UBERON:0003350,1.17e-08,9;UBERON:0004808,1.17e-08,9;UBERON:0001277,1.17e-08,9;UBERON:0009854,2.11e-08,23;UBERON:0009856,2.11e-08,23;UBERON:0002107,9.46e-08,22;UBERON:0007499,9.46e-08,22;UBERON:0006925,9.46e-08,22;UBERON:0009497,9.46e-08,22;UBERON:0000015,9.46e-08,22;UBERON:0002423,9.46e-08,22;UBERON:0006235,9.46e-08,22;UBERON:0008835,9.46e-08,22;UBERON:0003894,9.46e-08,22;UBERON:0004161,9.46e-08,22;UBERON:0008836,9.46e-08,22 | |||
|phase1_expression=0,19318.9295915074,16554.6923259489,9953.18980147386,10909.0081025015,1692.39094014376,1747.65616429513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7258.21625244569,8283.73973005444,31892.8432869482,18579.6264183332,12138.5718933596,23435.3982981351,27665.5993738774,10679.2065846914,0,0,31.6963362030877,222.415747208481,391.316355173891,198.044275574498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,102.390441360785,79.5566460438068,78.7966659791213,68.2265238320053,78.4047052420337,484.392805034412,0,0,0,0,0,0,0,0,0,0,1916.11968556555,0,0.148442139064825,0.173485326766136,0.608930956624282,2.07553947530453,0,0,6.53466274914312,2.22475470960936,0.144599356919912,0,0.161766849947409,0,0,795.892820401382,0,0.209446706813455,9359.43558873237,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0,7463.82988882101,11334.8801883328,1.49301775374664,4.18026009348789,94.4598491490944,1301.86715144368,3453.97577699853,5910.31020331721,8803.46314977378,7625.39690476698,6649.82695443753,4738.74525107613,3638.61475790414,7093.48277309912,8818.21629683765,8181.91835292893,0,0,0,0,0,0.631222379012867,0.126473074248515,0,0,0,46.2466098255952,1.16791574001266,2.75182593158484,5.17182858485164,3.24576194221605,1.68824011826692,27.4995919923933,2.01387296215567,5.0261920300261,31.3000011034413,79.072513590045,114.619411881899,87.6825861451915,47.2322501761099,43.0553792452589,29.4290548031654,0,0,0,0.678980343100753,0,0,0,1.17080188714679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,1.13552068166615,1.6025904330053,0,0,0,0,1.81394134178851,0,0,4.91896236710284,1042.24130634744,1.09060118843252,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0.161464426695906,0,0,0.164140899745061,5385.98289924638,0,0,1.23832120777933,3.1483069652851,0,0,0,0,0,0,114.560474161814,0,2.43983360552218,156.283728169146,103.080529935133,816.457625846958,26.7031405841945,70.3380908222609,29.8401773861794,1344.10727303589,0,0,0,0,0,0,0,0,1.17183946359555,0,0,0,0.948033361884535,0,0,0,0,0,0.600977247599844,0.295379054349154,0.504832249740738,0.381034033274999,0.403304740547362,0.682205165178267,0.481059208201647,0.584384510907845,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,7.29320151204882,3.5634237646757,148.729398336061,280.253123757837,249.302419259062,279.841550764063,235.261104152095,265.646306284971,228.237873077152,237.381221436152,200.142626417621,178.164824700312,205.758874634288,185.067268533934,196.381586432052,278.982154843839,289.687474824494,355.898283976061,274.200120516176,278.016597478576,276.448884434689,239.696591917847,247.413113475262,232.684381494167,258.5975263434,253.817888777916,268.787148124057,203.696326119207,189.128606161082,210.34475618922,187.318640993833,180.753494489329,0,316.275534618192,252.688359560799,0,0.882365676478062,0.231867835620421 | |phase1_expression=0,19318.9295915074,16554.6923259489,9953.18980147386,10909.0081025015,1692.39094014376,1747.65616429513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7258.21625244569,8283.73973005444,31892.8432869482,18579.6264183332,12138.5718933596,23435.3982981351,27665.5993738774,10679.2065846914,0,0,31.6963362030877,222.415747208481,391.316355173891,198.044275574498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,102.390441360785,79.5566460438068,78.7966659791213,68.2265238320053,78.4047052420337,484.392805034412,0,0,0,0,0,0,0,0,0,0,1916.11968556555,0,0.148442139064825,0.173485326766136,0.608930956624282,2.07553947530453,0,0,6.53466274914312,2.22475470960936,0.144599356919912,0,0.161766849947409,0,0,795.892820401382,0,0.209446706813455,9359.43558873237,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,0,7463.82988882101,11334.8801883328,1.49301775374664,4.18026009348789,94.4598491490944,1301.86715144368,3453.97577699853,5910.31020331721,8803.46314977378,7625.39690476698,6649.82695443753,4738.74525107613,3638.61475790414,7093.48277309912,8818.21629683765,8181.91835292893,0,0,0,0,0,0.631222379012867,0.126473074248515,0,0,0,46.2466098255952,1.16791574001266,2.75182593158484,5.17182858485164,3.24576194221605,1.68824011826692,27.4995919923933,2.01387296215567,5.0261920300261,31.3000011034413,79.072513590045,114.619411881899,87.6825861451915,47.2322501761099,43.0553792452589,29.4290548031654,0,0,0,0.678980343100753,0,0,0,1.17080188714679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,1.13552068166615,1.6025904330053,0,0,0,0,1.81394134178851,0,0,4.91896236710284,1042.24130634744,1.09060118843252,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0.161464426695906,0,0,0.164140899745061,5385.98289924638,0,0,1.23832120777933,3.1483069652851,0,0,0,0,0,0,114.560474161814,0,2.43983360552218,156.283728169146,103.080529935133,816.457625846958,26.7031405841945,70.3380908222609,29.8401773861794,1344.10727303589,0,0,0,0,0,0,0,0,1.17183946359555,0,0,0,0.948033361884535,0,0,0,0,0,0.600977247599844,0.295379054349154,0.504832249740738,0.381034033274999,0.403304740547362,0.682205165178267,0.481059208201647,0.584384510907845,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853668028770671,7.29320151204882,3.5634237646757,148.729398336061,280.253123757837,249.302419259062,279.841550764063,235.261104152095,265.646306284971,228.237873077152,237.381221436152,200.142626417621,178.164824700312,205.758874634288,185.067268533934,196.381586432052,278.982154843839,289.687474824494,355.898283976061,274.200120516176,278.016597478576,276.448884434689,239.696591917847,247.413113475262,232.684381494167,258.5975263434,253.817888777916,268.787148124057,203.696326119207,189.128606161082,210.34475618922,187.318640993833,180.753494489329,0,316.275534618192,252.688359560799,0,0.882365676478062,0.231867835620421 | ||
|short_description=p1@Fabp2 | |||
}} | }} |
Latest revision as of 13:26, 1 October 2015
Short description: | p1@Fabp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fabp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -7bp_to_NM_007980, uc008rex.1_5end |
EntrezGene: | Fabp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.17e-08 | 9 |
epithelial cell of alimentary canal | 1.17e-08 | 9 |
brush border epithelial cell | 5.23e-07 | 6 |
gut absorptive cell | 5.23e-07 | 6 |
enterocyte | 5.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.12e-26 | 31 |
gastrointestinal system | 3.28e-26 | 47 |
mucosa | 2.27e-14 | 15 |
digestive system | 2.46e-14 | 116 |
digestive tract | 2.46e-14 | 116 |
primitive gut | 2.46e-14 | 116 |
endoderm-derived structure | 2.60e-14 | 118 |
endoderm | 2.60e-14 | 118 |
presumptive endoderm | 2.60e-14 | 118 |
subdivision of digestive tract | 4.76e-13 | 114 |
intestinal mucosa | 1.46e-12 | 13 |
wall of intestine | 1.46e-12 | 13 |
gastrointestinal system mucosa | 1.46e-12 | 13 |
organ component layer | 3.30e-10 | 24 |
epithelium of mucosa | 1.17e-08 | 9 |
gastrointestinal system epithelium | 1.17e-08 | 9 |
intestinal epithelium | 1.17e-08 | 9 |
digestive tract diverticulum | 2.11e-08 | 23 |
sac | 2.11e-08 | 23 |
liver | 9.46e-08 | 22 |
epithelial sac | 9.46e-08 | 22 |
digestive gland | 9.46e-08 | 22 |
epithelium of foregut-midgut junction | 9.46e-08 | 22 |
anatomical boundary | 9.46e-08 | 22 |
hepatobiliary system | 9.46e-08 | 22 |
foregut-midgut junction | 9.46e-08 | 22 |
hepatic diverticulum | 9.46e-08 | 22 |
liver primordium | 9.46e-08 | 22 |
septum transversum | 9.46e-08 | 22 |
liver bud | 9.46e-08 | 22 |