FFCP PHASE1:Mm9::chr8:113551570..113551621,-: Difference between revisions
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{{FFCP|EntrezGene=234733|HGNC=|MCL_coexpression_id=166|UniProt=Q8R3C7|association_with_transcript=42bp_to_ENSMUST00000040241_5end|description=CAGE_peak_3_at_Ddx19b_5end|id=chr8:113551570..113551621,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!7.06e-15!128;UBERON:0001555!7.06e-15!128;UBERON:0007026!7.06e-15!128;UBERON:0004119!1.15e-14!130;UBERON:0000925!1.15e-14!130;UBERON:0006595!1.15e-14!130;UBERON:0004921!2.16e-14!126;UBERON:0004185!2.16e-14!126;UBERON:0000160!1.21e-13!43;UBERON:0005409!6.09e-13!59;UBERON:0002365!8.15e-11!25;UBERON:0002330!8.15e-11!25;UBERON:0009854!1.12e-10!23;UBERON:0009856!1.12e-10!23;UBERON:0000481!1.72e-10!230;UBERON:0005177!3.97e-10!85;UBERON:0002107!4.06e-10!22;UBERON:0007499!4.06e-10!22;UBERON:0006925!4.06e-10!22;UBERON:0009497!4.06e-10!22;UBERON:0000015!4.06e-10!22;UBERON:0002423!4.06e-10!22;UBERON:0006235!4.06e-10!22;UBERON:0008835!4.06e-10!22;UBERON:0003894!4.06e-10!22;UBERON:0004161!4.06e-10!22;UBERON:0008836!4.06e-10!22;UBERON:0002100!9.43e-09!98;UBERON:0009569!1.67e-08!66;UBERON:0005172!1.99e-07!49;UBERON:0005173!1.99e-07!49;UBERON:0002417!1.99e-07!49;UBERON:0000916!1.99e-07!49;UBERON:0005256!6.95e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.82e-11,79;UBERON:0001007,2.70e-11,116;UBERON:0001555,2.70e-11,116;UBERON:0007026,2.70e-11,116;UBERON:0004119,4.17e-11,118;UBERON:0000925,4.17e-11,118;UBERON:0006595,4.17e-11,118;UBERON:0004921,7.18e-11,114;UBERON:0002365,7.46e-11,25;UBERON:0002330,7.46e-11,25;UBERON:0000160,9.77e-11,31;UBERON:0009854,1.02e-10,23;UBERON:0009856,1.02e-10,23;UBERON:0002100,2.35e-10,90;UBERON:0002107,3.74e-10,22;UBERON:0007499,3.74e-10,22;UBERON:0006925,3.74e-10,22;UBERON:0009497,3.74e-10,22;UBERON:0000015,3.74e-10,22;UBERON:0002423,3.74e-10,22;UBERON:0006235,3.74e-10,22;UBERON:0008835,3.74e-10,22;UBERON:0003894,3.74e-10,22;UBERON:0004161,3.74e-10,22;UBERON:0008836,3.74e-10,22;UBERON:0005409,1.06e-09,47;UBERON:0009569,2.26e-08,66;UBERON:0005256,1.46e-07,45;UBERON:0005172,2.76e-07,49;UBERON:0005173,2.76e-07,49;UBERON:0002417,2.76e-07,49;UBERON:0000916,2.76e-07,49;UBERON:0003104,3.61e-07,61;UBERON:0009142,3.61e-07,61|phase1_expression=1.28119077683835,4.53668029931169,6.82498859084304,7.25914107136392,5.50985302940982,4.19698179779725,7.47560449905682,1.42035655785734,3.23814060948833,2.80877431586392,4.10923123741212,3.03134204182278,1.19840510951844,0.786783621770977,1.99865857089398,0.809901069559304,0.699561878128147,2.5236973228659,2.60517423850904,1.27316895539409,2.63634199468316,2.18440092641948,1.56719873483361,3.67982572424835,3.67054849707472,3.44539178469012,2.58457197695445,1.939241094173,4.56056206695297,4.03248207615889,6.20845429834853,3.17515336729816,3.07532393792285,0,4.33277429626912,5.15327400611326,3.06254034393554,0.837063261473815,0.7813353445238,0.523523743973798,0,0,1.94204141212461,3.27331726736501,2.83855407414641,4.77221555620372,0.782391344348039,2.39827672018491,1.97717564461025,4.47188767870852,1.95980990275508,0,2.34895648480831,6.5282592781021,3.6970317905671,2.05807548828758,1.71920063963254,3.09403255366465,1.21389876515759,0.528990979272033,0.633831403506179,3.04960078862219,1.77858959222228,0.449949858640699,2.96659908770092,0.7104801149461,0.299600110518405,0.384218305321555,1.14058573539325,0.540023753326763,0.841299845405528,2.28520787523043,1.76694832761291,0.122490799214954,0.479227355091182,0,1.10115880999389,2.55374676170375,1.22885226604995,0.527545150920775,1.46380229763855,1.04182674111352,1.3959149950069,1.68828783009504,1.06958773443767,0.589257170947335,1.70846016958924,1.67759501242771,1.96888102666279,1.28471652181535,3.47837386442013,6.88339101585109,13.599426674155,11.3337670243942,14.9448576012964,17.9210754838934,5.47733238513832,0.511290967734173,1.55871602761721,1.41335829804136,1.54927761754349,0,2.54805239706646,0,5.62876706629157,6.08063677140237,6.0662933401774,6.16592950482924,3.6251303710604,2.22663208597237,1.38788261412909,1.21786191324856,2.99800146432876,3.16517545160507,3.64524992120685,3.64433114856059,6.42706916109372,3.47038456607788,0.884610551949874,2.26473589926373,1.98757366614354,2.42437626567611,7.45567044872489,2.92780797011547,4.60782754989601,6.89734049063197,1.67741174308288,1.19980546198682,1.14363204365758,1.9472783122627,1.37250180845588,1.00523481690292,3.99795936442236,4.85859368927628,1.66230435647648,1.46017136760982,2.13862664085664,2.86136032403214,7.07623723614289,2.10441855886474,0.910843100738926,1.37941262660084,0.900310649026746,1.65775299619287,1.36072998302656,1.2811372028485,1.21812241927647,3.3631438196072,0.646703978798527,0.567318240503458,0.703804496655795,0.657587197282725,1.39023624612799,2.78601733217733,1.02891068203972,0.199034266818493,0.702213187313235,1.54408744268829,1.42081749697796,1.24275463521301,0.234526059981096,0.900310307305074,1.89395788468168,1.77087808572663,0.925602677324269,2.09280550275367,0.53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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234733 | |||
|HGNC= | |||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R3C7 | |||
|association_with_transcript=42bp_to_ENSMUST00000040241_5end | |||
|cluster_id=chr8:113551570..113551621,- | |||
|description=CAGE_peak_3_at_Ddx19b_5end | |||
|id=chr8:113551570..113551621,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!7.06e-15!128;UBERON:0001555!7.06e-15!128;UBERON:0007026!7.06e-15!128;UBERON:0004119!1.15e-14!130;UBERON:0000925!1.15e-14!130;UBERON:0006595!1.15e-14!130;UBERON:0004921!2.16e-14!126;UBERON:0004185!2.16e-14!126;UBERON:0000160!1.21e-13!43;UBERON:0005409!6.09e-13!59;UBERON:0002365!8.15e-11!25;UBERON:0002330!8.15e-11!25;UBERON:0009854!1.12e-10!23;UBERON:0009856!1.12e-10!23;UBERON:0000481!1.72e-10!230;UBERON:0005177!3.97e-10!85;UBERON:0002107!4.06e-10!22;UBERON:0007499!4.06e-10!22;UBERON:0006925!4.06e-10!22;UBERON:0009497!4.06e-10!22;UBERON:0000015!4.06e-10!22;UBERON:0002423!4.06e-10!22;UBERON:0006235!4.06e-10!22;UBERON:0008835!4.06e-10!22;UBERON:0003894!4.06e-10!22;UBERON:0004161!4.06e-10!22;UBERON:0008836!4.06e-10!22;UBERON:0002100!9.43e-09!98;UBERON:0009569!1.67e-08!66;UBERON:0005172!1.99e-07!49;UBERON:0005173!1.99e-07!49;UBERON:0002417!1.99e-07!49;UBERON:0000916!1.99e-07!49;UBERON:0005256!6.95e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.82e-11,79;UBERON:0001007,2.70e-11,116;UBERON:0001555,2.70e-11,116;UBERON:0007026,2.70e-11,116;UBERON:0004119,4.17e-11,118;UBERON:0000925,4.17e-11,118;UBERON:0006595,4.17e-11,118;UBERON:0004921,7.18e-11,114;UBERON:0002365,7.46e-11,25;UBERON:0002330,7.46e-11,25;UBERON:0000160,9.77e-11,31;UBERON:0009854,1.02e-10,23;UBERON:0009856,1.02e-10,23;UBERON:0002100,2.35e-10,90;UBERON:0002107,3.74e-10,22;UBERON:0007499,3.74e-10,22;UBERON:0006925,3.74e-10,22;UBERON:0009497,3.74e-10,22;UBERON:0000015,3.74e-10,22;UBERON:0002423,3.74e-10,22;UBERON:0006235,3.74e-10,22;UBERON:0008835,3.74e-10,22;UBERON:0003894,3.74e-10,22;UBERON:0004161,3.74e-10,22;UBERON:0008836,3.74e-10,22;UBERON:0005409,1.06e-09,47;UBERON:0009569,2.26e-08,66;UBERON:0005256,1.46e-07,45;UBERON:0005172,2.76e-07,49;UBERON:0005173,2.76e-07,49;UBERON:0002417,2.76e-07,49;UBERON:0000916,2.76e-07,49;UBERON:0003104,3.61e-07,61;UBERON:0009142,3.61e-07,61 | |||
|phase1_expression=1.28119077683835,4.53668029931169,6.82498859084304,7.25914107136392,5.50985302940982,4.19698179779725,7.47560449905682,1.42035655785734,3.23814060948833,2.80877431586392,4.10923123741212,3.03134204182278,1.19840510951844,0.786783621770977,1.99865857089398,0.809901069559304,0.699561878128147,2.5236973228659,2.60517423850904,1.27316895539409,2.63634199468316,2.18440092641948,1.56719873483361,3.67982572424835,3.67054849707472,3.44539178469012,2.58457197695445,1.939241094173,4.56056206695297,4.03248207615889,6.20845429834853,3.17515336729816,3.07532393792285,0,4.33277429626912,5.15327400611326,3.06254034393554,0.837063261473815,0.7813353445238,0.523523743973798,0,0,1.94204141212461,3.27331726736501,2.83855407414641,4.77221555620372,0.782391344348039,2.39827672018491,1.97717564461025,4.47188767870852,1.95980990275508,0,2.34895648480831,6.5282592781021,3.6970317905671,2.05807548828758,1.71920063963254,3.09403255366465,1.21389876515759,0.528990979272033,0.633831403506179,3.04960078862219,1.77858959222228,0.449949858640699,2.96659908770092,0.7104801149461,0.299600110518405,0.384218305321555,1.14058573539325,0.540023753326763,0.841299845405528,2.28520787523043,1.76694832761291,0.122490799214954,0.479227355091182,0,1.10115880999389,2.55374676170375,1.22885226604995,0.527545150920775,1.46380229763855,1.04182674111352,1.3959149950069,1.68828783009504,1.06958773443767,0.589257170947335,1.70846016958924,1.67759501242771,1.96888102666279,1.28471652181535,3.47837386442013,6.88339101585109,13.599426674155,11.3337670243942,14.9448576012964,17.9210754838934,5.47733238513832,0.511290967734173,1.55871602761721,1.41335829804136,1.54927761754349,0,2.54805239706646,0,5.62876706629157,6.08063677140237,6.0662933401774,6.16592950482924,3.6251303710604,2.22663208597237,1.38788261412909,1.21786191324856,2.99800146432876,3.16517545160507,3.64524992120685,3.64433114856059,6.42706916109372,3.47038456607788,0.884610551949874,2.26473589926373,1.98757366614354,2.42437626567611,7.45567044872489,2.92780797011547,4.60782754989601,6.89734049063197,1.67741174308288,1.19980546198682,1.14363204365758,1.9472783122627,1.37250180845588,1.00523481690292,3.99795936442236,4.85859368927628,1.66230435647648,1.46017136760982,2.13862664085664,2.86136032403214,7.07623723614289,2.10441855886474,0.910843100738926,1.37941262660084,0.900310649026746,1.65775299619287,1.36072998302656,1.2811372028485,1.21812241927647,3.3631438196072,0.646703978798527,0.567318240503458,0.703804496655795,0.657587197282725,1.39023624612799,2.78601733217733,1.02891068203972,0.199034266818493,0.702213187313235,1.54408744268829,1.42081749697796,1.24275463521301,0.234526059981096,0.900310307305074,1.89395788468168,1.77087808572663,0.925602677324269,2.09280550275367,0.536546802799238,0.934122738937356,1.31647879930784,2.62667942526552,2.10778904819225,2.77779976108131,2.41505126820156,2.95254121272818,3.15434922846191,1.3377599609307,3.96502539580558,5.55346189993443,1.2797295032114,0.928946687441754,3.73715637834071,7.86565746031036,3.55804870151792,3.99473814836374,5.69434873853414,8.56434564564857,6.78605063760728,7.16243299348143,6.62877896205008,6.29173586057955,6.26800344636613,7.96565093017469,1.70701110857774,1.94222471436539,2.25415471346161,2.03651327845314,2.52138233317913,4.55882829287071,4.17361145020098,5.60918562322488,5.49495547444812,8.51440431060424,14.2297261001831,2.8363667971736,3.93117990226406,2.02375901146368,1.82574109249653,3.85883455603867,3.8193877767213,6.61701116136864,9.89024883327716,10.158772287959,11.5014565221884,11.1642284300551,18.0981850406445,14.9021537988796,11.8402292924462,16.4030797263545,5.54259570499814,1.13694847062291,2.11854469374634,1.86719594352707,2.11221223459652,2.01007508930179,3.33261097240419,4.09780660501378,1.89162172927429,3.10050565508285,2.39182152986231,3.4411296090305,3.45369963731791,2.74833211304872,1.50791283939272,2.17562273527484,3.93411418415229,3.31124095565679,1.9266070798535,1.99259867206745,1.63934945376675,4.29200576247434,1.89304931649754,1.17131623288992,1.07711698866399,1.43381278771531,0.668396022247182,1.41538265394416,0.809621403349789,1.46127928955656,0.395287777946524,1.92792789853084,1.84522110770749,1.06839362200353,2.11753047159649,0.989820737835213,2.65490276679926,2.18502572539483,5.74414758233027,5.28094223316515,2.36241514304618,4.91896236710284,4.65170927702798,5.81653967164009,5.34746067577082,4.74055136903724,4.21674434299995,5.15677716240934,2.7235168460303,2.16073312837572,1.16422815404479,1.71469628025274,1.24138163549592,1.60531935841864,2.46823530903181,2.43571959291679,1.64270195644597,2.33015277950202,2.8668691747145,2.96795255294664,2.26050197374268,3.92034012033013,5.49112782414428,3.61109979439135,5.82961673259701,1.8542530201051,2.05045056957423,1.23832120777933,0.925972636848558,0.941842285023455,1.50363650493128,1.37266903923914,1.18984900995699,1.25956307091292,1.38199973804424,7.63736494412091,1.73984796469624,3.04979200690273,3.67218158794124,3.97267762427491,4.585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| |||
|short_description=p3@Ddx19b | |||
}} |
Latest revision as of 12:34, 1 October 2015
Short description: | p3@Ddx19b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ddx19b_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 42bp_to_ENSMUST00000040241_5end |
EntrezGene: | Ddx19b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.82e-11 | 79 |
digestive system | 2.70e-11 | 116 |
digestive tract | 2.70e-11 | 116 |
primitive gut | 2.70e-11 | 116 |
endoderm-derived structure | 4.17e-11 | 118 |
endoderm | 4.17e-11 | 118 |
presumptive endoderm | 4.17e-11 | 118 |
subdivision of digestive tract | 7.18e-11 | 114 |
exocrine gland | 7.46e-11 | 25 |
exocrine system | 7.46e-11 | 25 |
intestine | 9.77e-11 | 31 |
digestive tract diverticulum | 1.02e-10 | 23 |
sac | 1.02e-10 | 23 |
trunk | 2.35e-10 | 90 |
liver | 3.74e-10 | 22 |
epithelial sac | 3.74e-10 | 22 |
digestive gland | 3.74e-10 | 22 |
epithelium of foregut-midgut junction | 3.74e-10 | 22 |
anatomical boundary | 3.74e-10 | 22 |
hepatobiliary system | 3.74e-10 | 22 |
foregut-midgut junction | 3.74e-10 | 22 |
hepatic diverticulum | 3.74e-10 | 22 |
liver primordium | 3.74e-10 | 22 |
septum transversum | 3.74e-10 | 22 |
liver bud | 3.74e-10 | 22 |
gastrointestinal system | 1.06e-09 | 47 |
subdivision of trunk | 2.26e-08 | 66 |
trunk mesenchyme | 1.46e-07 | 45 |
abdomen element | 2.76e-07 | 49 |
abdominal segment element | 2.76e-07 | 49 |
abdominal segment of trunk | 2.76e-07 | 49 |
abdomen | 2.76e-07 | 49 |
mesenchyme | 3.61e-07 | 61 |
entire embryonic mesenchyme | 3.61e-07 | 61 |