FFCP PHASE1:Mm9::chr3:116414767..116414783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229782 | |EntrezGene=229782 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1324 | |||
|TSSclassifier=NA | |||
|UniProt=D3YXZ7 | |UniProt=D3YXZ7 | ||
|association_with_transcript=-7bp_to_ENSMUST00000153108_5end | |association_with_transcript=-7bp_to_ENSMUST00000153108_5end | ||
|cluster_id=chr3:116414767..116414783,- | |||
|description=CAGE_peak_8_at_Slc35a3_5end | |description=CAGE_peak_8_at_Slc35a3_5end | ||
|id=chr3:116414767..116414783,- | |id=chr3:116414767..116414783,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.18e-13,9;CL:0002251,3.18e-13,9;CL:0000066,1.87e-08,25;CL:0000682,2.38e-08,3;CL:0002250,4.73e-08,3;CL:0002076,1.59e-07,15;CL:0000239,3.14e-07,6;CL:0000677,3.14e-07,6;CL:0000584,3.14e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.67e-17!59;UBERON:0000160!2.90e-10!43;UBERON:0000344!5.12e-09!15;UBERON:0000945!8.42e-08!16;UBERON:0010039!8.42e-08!16;UBERON:0004923!1.04e-07!24;UBERON:0001242!1.73e-07!13;UBERON:0000060!1.73e-07!13;UBERON:0001262!1.73e-07!13;UBERON:0004786!1.73e-07!13;UBERON:0001007!3.82e-07!128;UBERON:0001555!3.82e-07!128;UBERON:0007026!3.82e-07!128;UBERON:0004119!9.45e-07!130;UBERON:0000925!9.45e-07!130;UBERON:0006595!9.45e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.38e-37,47;UBERON:0000160,2.90e-25,31;UBERON:0000344,2.95e-22,15;UBERON:0001242,7.87e-18,13;UBERON:0001262,7.87e-18,13;UBERON:0004786,7.87e-18,13;UBERON:0001007,3.65e-15,116;UBERON:0001555,3.65e-15,116;UBERON:0007026,3.65e-15,116;UBERON:0004119,8.53e-15,118;UBERON:0000925,8.53e-15,118;UBERON:0006595,8.53e-15,118;UBERON:0003350,3.18e-13,9;UBERON:0004808,3.18e-13,9;UBERON:0001277,3.18e-13,9;UBERON:0004921,5.84e-13,114;UBERON:0004923,6.07e-13,24;UBERON:0000945,9.18e-12,16;UBERON:0010039,9.18e-12,16;UBERON:0000485,1.24e-10,11;UBERON:0000331,5.00e-08,3;UBERON:0002116,5.00e-08,3;UBERON:0001204,5.00e-08,3;UBERON:0001168,5.00e-08,3 | |||
|phase1_expression=0,2.44282785347553,1.36499771816861,0,0,3.69334398206158,5.37309073369709,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,2.23989391910769,2.98232065387321,1.72269589234506,2.15380998079537,3.878482188346,1.14014051673824,1.00812051903972,7.76056787293567,0,0,0,1.73310971850765,1.32987716286794,3.06254034393554,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.79928715803342,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0,7.45567044872489,0,0,1.02182822083437,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0.660837565967596,0.793351699990633,0.213288250535234,0,0.77320476793256,0.80673409849337,1.11189021922435,0.380451252225118,0,0.988193728344065,1.00534083520108,1.59165177632921,1.75467678407208,1.79763881730844,5.83572734661674,4.18196673834171,0,0,1.1270773567308,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.500535317148282,0,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,6.83638033970382,0.16488625294148,0,0.120625849856312,0,0,0.582961673259701,0,0.341741761595705,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0.138199973804424,3.81868247206045,0.158167996790568,1.21991680276109,1.94409613479242,1.88179466413022,4.58561383866973,2.02296519577231,2.72756403893609,4.71160695571253,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0.73260649706906,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.37456602987953,0,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0,0.394017929502254,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,2.44282785347553,1.36499771816861,0,0,3.69334398206158,5.37309073369709,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,2.23989391910769,2.98232065387321,1.72269589234506,2.15380998079537,3.878482188346,1.14014051673824,1.00812051903972,7.76056787293567,0,0,0,1.73310971850765,1.32987716286794,3.06254034393554,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.79928715803342,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0,7.45567044872489,0,0,1.02182822083437,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0.660837565967596,0.793351699990633,0.213288250535234,0,0.77320476793256,0.80673409849337,1.11189021922435,0.380451252225118,0,0.988193728344065,1.00534083520108,1.59165177632921,1.75467678407208,1.79763881730844,5.83572734661674,4.18196673834171,0,0,1.1270773567308,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.500535317148282,0,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,6.83638033970382,0.16488625294148,0,0.120625849856312,0,0,0.582961673259701,0,0.341741761595705,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0.138199973804424,3.81868247206045,0.158167996790568,1.21991680276109,1.94409613479242,1.88179466413022,4.58561383866973,2.02296519577231,2.72756403893609,4.71160695571253,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0.73260649706906,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.37456602987953,0,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0,0.394017929502254,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0 | ||
|short_description=p8@Slc35a3 | |short_description=p8@Slc35a3 | ||
}} | }} |
Latest revision as of 12:07, 1 October 2015
Short description: | p8@Slc35a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Slc35a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1324 |
Association with transcript: | -7bp_to_ENSMUST00000153108_5end |
EntrezGene: | Slc35a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.18e-13 | 9 |
epithelial cell of alimentary canal | 3.18e-13 | 9 |
epithelial cell | 1.87e-08 | 25 |
M cell of gut | 2.38e-08 | 3 |
intestinal crypt stem cell | 4.73e-08 | 3 |
endo-epithelial cell | 1.59e-07 | 15 |
brush border epithelial cell | 3.14e-07 | 6 |
gut absorptive cell | 3.14e-07 | 6 |
enterocyte | 3.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.38e-37 | 47 |
intestine | 2.90e-25 | 31 |
mucosa | 2.95e-22 | 15 |
intestinal mucosa | 7.87e-18 | 13 |
wall of intestine | 7.87e-18 | 13 |
gastrointestinal system mucosa | 7.87e-18 | 13 |
digestive system | 3.65e-15 | 116 |
digestive tract | 3.65e-15 | 116 |
primitive gut | 3.65e-15 | 116 |
endoderm-derived structure | 8.53e-15 | 118 |
endoderm | 8.53e-15 | 118 |
presumptive endoderm | 8.53e-15 | 118 |
epithelium of mucosa | 3.18e-13 | 9 |
gastrointestinal system epithelium | 3.18e-13 | 9 |
intestinal epithelium | 3.18e-13 | 9 |
subdivision of digestive tract | 5.84e-13 | 114 |
organ component layer | 6.07e-13 | 24 |
stomach | 9.18e-12 | 16 |
food storage organ | 9.18e-12 | 16 |
simple columnar epithelium | 1.24e-10 | 11 |
ileal mucosa | 5.00e-08 | 3 |
ileum | 5.00e-08 | 3 |
mucosa of small intestine | 5.00e-08 | 3 |
wall of small intestine | 5.00e-08 | 3 |