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FFCP PHASE1:Mm9::chr5:100845104..100845128,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:100845104..100845128,-
|DHSsupport=NA
|short_description=p2@Sec31a
|DPIdataset=NA
|description=CAGE_peak_2_at_Sec31a_5end
|association_with_transcript=124bp_to_ENSMUST00000046296,ENSMUST00000094578,ENSMUST00000112918,NM_026969,uc008yhk.2_5end
|EntrezGene=69162
|EntrezGene=69162
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q3UPL0,E9Q9G9
|UniProt=Q3UPL0,E9Q9G9
|association_with_transcript=124bp_to_ENSMUST00000046296,ENSMUST00000094578,ENSMUST00000112918,NM_026969,uc008yhk.2_5end
|cluster_id=chr5:100845104..100845128,-
|description=CAGE_peak_2_at_Sec31a_5end
|id=chr5:100845104..100845128,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,5.46e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!6.67e-19!43;UBERON:0004119!9.10e-17!130;UBERON:0000925!9.10e-17!130;UBERON:0006595!9.10e-17!130;UBERON:0001007!4.23e-16!128;UBERON:0001555!4.23e-16!128;UBERON:0007026!4.23e-16!128;UBERON:0005409!4.60e-16!59;UBERON:0004921!4.23e-15!126;UBERON:0004185!4.23e-15!126;UBERON:0002365!1.07e-08!25;UBERON:0002330!1.07e-08!25;UBERON:0000344!1.90e-08!15;UBERON:0002108!4.16e-08!16;UBERON:0009854!5.85e-08!23;UBERON:0009856!5.85e-08!23;UBERON:0002107!2.03e-07!22;UBERON:0007499!2.03e-07!22;UBERON:0006925!2.03e-07!22;UBERON:0009497!2.03e-07!22;UBERON:0000015!2.03e-07!22;UBERON:0002423!2.03e-07!22;UBERON:0006235!2.03e-07!22;UBERON:0008835!2.03e-07!22;UBERON:0003894!2.03e-07!22;UBERON:0004161!2.03e-07!22;UBERON:0008836!2.03e-07!22;UBERON:0001242!2.10e-07!13;UBERON:0000060!2.10e-07!13;UBERON:0001262!2.10e-07!13;UBERON:0004786!2.10e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.74e-17,31;UBERON:0005409,1.08e-14,47;UBERON:0004119,3.34e-12,118;UBERON:0000925,3.34e-12,118;UBERON:0006595,3.34e-12,118;UBERON:0001007,1.59e-11,116;UBERON:0001555,1.59e-11,116;UBERON:0007026,1.59e-11,116;UBERON:0004921,1.58e-10,114;UBERON:0000344,1.73e-10,15;UBERON:0002365,7.10e-10,25;UBERON:0002330,7.10e-10,25;UBERON:0001242,4.21e-09,13;UBERON:0001262,4.21e-09,13;UBERON:0004786,4.21e-09,13;UBERON:0009854,6.49e-09,23;UBERON:0009856,6.49e-09,23;UBERON:0002107,3.18e-08,22;UBERON:0007499,3.18e-08,22;UBERON:0006925,3.18e-08,22;UBERON:0009497,3.18e-08,22;UBERON:0000015,3.18e-08,22;UBERON:0002423,3.18e-08,22;UBERON:0006235,3.18e-08,22;UBERON:0008835,3.18e-08,22;UBERON:0003894,3.18e-08,22;UBERON:0004161,3.18e-08,22;UBERON:0008836,3.18e-08,22;UBERON:0001264,4.66e-07,12;UBERON:0004923,5.54e-07,24
|phase1_expression=0.640595388419176,40.4811472861659,48.6849186146804,58.9805212048319,67.6209235427569,11.9194283057442,8.87728034262997,0,0.422366166455,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0,1.10556277196391,0,0,9.75953779039781,10.0940083669555,31.5827580263261,27.1380057580217,16.3758136841276,18.6222951067246,27.4712841438325,9.5344119581781,0,0,0,0.288851619751275,1.82858109894342,1.83752420636132,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,1.56478268869608,0.218025156380447,0,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0.336093799142464,1.28629718017973,0,0,0,0,0,1.0165335962074,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0,0.0755715601067855,0.869593466105033,5.16254326188832,4.75979933595425,5.93673510801599,12.3457519315057,8.06448396775204,4.91555470461132,0.340860645156116,0,0,0.563373679106722,0,0,0,1.73192832808971,1.77351905832569,1.01104889002957,11.5325718516251,0.258937883647172,0.593768556259299,0.346970653532272,0,0.461230994512117,0,0.352766121407114,0.251333182659351,2.22475470960936,0.433798070759735,0.884610551949874,1.7794353494215,0.883366073841574,3.39412677194655,13.0474232852686,0,0.209446706813455,29.6330184041966,0,0,0,0,0,0,0,0,0,0,0.81471491080253,4.35424397135326,19.2069296409593,1.05220927943237,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.567318240503458,1.23165786914764,1.31517439456545,1.39023624612799,1.74126083261083,0.823128545631774,0.59710280045548,0,0.257347907114715,0,0,1.17263029990548,0.36012412292203,0,0,0.617068451549513,0.697601834251224,0,0.583826711835847,0.658239399653922,0.32833492815819,0.648550476366846,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,72.6921322564356,34.1141230995972,0,0.464473343720877,0.644337306610467,4.03367049246685,4.44756087689741,4.56541502670142,26.0990983849481,12.5171205590248,11.0587491872119,10.3457365461398,7.60359939764569,29.6610404855893,19.8847005884719,31.2651799009356,0.569003702859245,0.456994050438915,0,1.01825663922657,0.775809948670503,0.841629838683823,2.46622494784603,3.09981310757165,2.19798218977925,3.20832626196681,7.41131567717872,1.33476084572875,0.196558995113203,0.449724224769707,1.01430060694251,1.92941727801933,3.05551022137704,2.01387296215567,2.43202840162553,2.74561413188081,4.31304619582064,8.18710084870708,9.98520553966594,4.79899868099512,5.9201146462231,7.71909634181387,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,1.17080188714679,0.472905432318573,0.221464689648775,0.637819074629948,0.655453258862952,0.863424909329478,0.723245292907558,0,0,5.90117127622843,3.03530420935206,0,0.117211686592203,0.327869890753351,0.252470927204373,0,0,0,0,0,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,0,0.567760340833074,0.35613120733451,0.488660878060728,1.15479086080775,17.2568679841952,0.242780636154981,2.11626489875326,5.65815239267694,4.72483028609236,6.45613810682248,5.68542244970086,6.18007340111759,4.27796854061666,8.84902922220285,11.5960469432499,19.5957532171555,2.04263763452273,0.540183282093931,0.517434735131018,0.214337035031592,0.354680467284547,0.713475270408282,0.493647061806363,1.522324745573,1.64270195644597,2.96564899209348,3.30792597082443,0.32977250588296,0.645857706783622,0.603129249281559,0.119372344003136,0.492422699235184,27.399198643206,0,0.170870880797853,0.82554747185289,0.185194527369712,0,0,0,0.339956859987711,0,0.829199842826543,4.77335309007557,0.158167996790568,0,1.62008011232702,1.25452977608681,2.40198820120795,2.15782954215713,4.54594006489348,2.87931536182433,6.99920855775682,11.1841076355647,0.56369293868419,0.448549638131936,0.165458490457098,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.524296722128554,0,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.51968329191118,0.716106782669926,0.198681354781265,0.360586348559907,0,0.201932899896295,0.228620419965,0.403304740547362,0,0.481059208201647,0.350630706544707,2.94749498699775,0.443971906748129,0.0897138566094757,1.17519231454855,0,1.31377732815827,1.28206136987086,2.14368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,1.25767897576789,1.10306105070008,1.55572709461131,1.23621034343337,0.64183841918363,1.51618327058278,0.760437899670719,1.13175804831646,1.40462261204824,1.08842759088278,1.14870937911227,2.38146845641537,1.39061191133827,1.15745532278223,2.06042950401653,1.47198920134397,0.342869252385415,1.59728225543404,2.62279808942053,1.16277133305863,1.03520318456864,1.4384483341585,0.73171189149109,1.8414879800649,1.62964936615034,1.68342681497322,0.830445126869219,0.985044823755635,0.409231043169689,1.70430525304563,0.771626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|phase1_expression=0.640595388419176,40.4811472861659,48.6849186146804,58.9805212048319,67.6209235427569,11.9194283057442,8.87728034262997,0,0.422366166455,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0,1.10556277196391,0,0,9.75953779039781,10.0940083669555,31.5827580263261,27.1380057580217,16.3758136841276,18.6222951067246,27.4712841438325,9.5344119581781,0,0,0,0.288851619751275,1.82858109894342,1.83752420636132,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,1.56478268869608,0.218025156380447,0,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0.336093799142464,1.28629718017973,0,0,0,0,0,1.0165335962074,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0,0.0755715601067855,0.869593466105033,5.16254326188832,4.75979933595425,5.93673510801599,12.3457519315057,8.06448396775204,4.91555470461132,0.340860645156116,0,0,0.563373679106722,0,0,0,1.73192832808971,1.77351905832569,1.01104889002957,11.5325718516251,0.258937883647172,0.593768556259299,0.346970653532272,0,0.461230994512117,0,0.352766121407114,0.251333182659351,2.22475470960936,0.433798070759735,0.884610551949874,1.7794353494215,0.883366073841574,3.39412677194655,13.0474232852686,0,0.209446706813455,29.6330184041966,0,0,0,0,0,0,0,0,0,0,0.81471491080253,4.35424397135326,19.2069296409593,1.05220927943237,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.567318240503458,1.23165786914764,1.31517439456545,1.39023624612799,1.74126083261083,0.823128545631774,0.59710280045548,0,0.257347907114715,0,0,1.17263029990548,0.36012412292203,0,0,0.617068451549513,0.697601834251224,0,0.583826711835847,0.658239399653922,0.32833492815819,0.648550476366846,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,72.6921322564356,34.1141230995972,0,0.464473343720877,0.644337306610467,4.03367049246685,4.44756087689741,4.56541502670142,26.0990983849481,12.5171205590248,11.0587491872119,10.3457365461398,7.60359939764569,29.6610404855893,19.8847005884719,31.2651799009356,0.569003702859245,0.456994050438915,0,1.01825663922657,0.775809948670503,0.841629838683823,2.46622494784603,3.09981310757165,2.19798218977925,3.20832626196681,7.41131567717872,1.33476084572875,0.196558995113203,0.449724224769707,1.01430060694251,1.92941727801933,3.05551022137704,2.01387296215567,2.43202840162553,2.74561413188081,4.31304619582064,8.18710084870708,9.98520553966594,4.79899868099512,5.9201146462231,7.71909634181387,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,1.17080188714679,0.472905432318573,0.221464689648775,0.637819074629948,0.655453258862952,0.863424909329478,0.723245292907558,0,0,5.90117127622843,3.03530420935206,0,0.117211686592203,0.327869890753351,0.252470927204373,0,0,0,0,0,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,0,0.567760340833074,0.35613120733451,0.488660878060728,1.15479086080775,17.2568679841952,0.242780636154981,2.11626489875326,5.65815239267694,4.72483028609236,6.45613810682248,5.68542244970086,6.18007340111759,4.27796854061666,8.84902922220285,11.5960469432499,19.5957532171555,2.04263763452273,0.540183282093931,0.517434735131018,0.214337035031592,0.354680467284547,0.713475270408282,0.493647061806363,1.522324745573,1.64270195644597,2.96564899209348,3.30792597082443,0.32977250588296,0.645857706783622,0.603129249281559,0.119372344003136,0.492422699235184,27.399198643206,0,0.170870880797853,0.82554747185289,0.185194527369712,0,0,0,0.339956859987711,0,0.829199842826543,4.77335309007557,0.158167996790568,0,1.62008011232702,1.25452977608681,2.40198820120795,2.15782954215713,4.54594006489348,2.87931536182433,6.99920855775682,11.1841076355647,0.56369293868419,0.448549638131936,0.165458490457098,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.524296722128554,0,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.51968329191118,0.716106782669926,0.198681354781265,0.360586348559907,0,0.201932899896295,0.228620419965,0.403304740547362,0,0.481059208201647,0.350630706544707,2.94749498699775,0.443971906748129,0.0897138566094757,1.17519231454855,0,1.31377732815827,1.28206136987086,2.14368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,1.25767897576789,1.10306105070008,1.55572709461131,1.23621034343337,0.64183841918363,1.51618327058278,0.760437899670719,1.13175804831646,1.40462261204824,1.08842759088278,1.14870937911227,2.38146845641537,1.39061191133827,1.15745532278223,2.06042950401653,1.47198920134397,0.342869252385415,1.59728225543404,2.62279808942053,1.16277133305863,1.03520318456864,1.4384483341585,0.73171189149109,1.8414879800649,1.62964936615034,1.68342681497322,0.830445126869219,0.985044823755635,0.409231043169689,1.70430525304563,0.771626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|short_description=p2@Sec31a
}}
}}

Latest revision as of 11:36, 1 October 2015

Short description:p2@Sec31a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sec31a_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 124bp_to_ENSMUST00000046296, ENSMUST00000094578, ENSMUST00000112918, NM_026969, uc008yhk.2_5end
EntrezGene:Sec31a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sec31a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I648.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I358.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I467.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.92
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.09
GP2+ M cell, pool1.CNhs13228.11845-124H931.58
GP2+ M cell, pool2.CNhs13231.11846-124I127.14
GP2+ M cell, pool3.CNhs13240.11847-124I216.38
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C127.47
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.53
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H729.63
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I372.69
intestine, adult.CNhs10496.178-9A334.11
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D126.10
intestine, neonate N01.CNhs11192.1322-23E912.52
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F210.35
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E319.88
intestine, neonate N30.CNhs11131.1384-42G131.27
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I127.40
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.46e-0725

Uber anatomy
Ontology termp-valuen
intestine2.74e-1731
gastrointestinal system1.08e-1447
endoderm-derived structure3.34e-12118
endoderm3.34e-12118
presumptive endoderm3.34e-12118
digestive system1.59e-11116
digestive tract1.59e-11116
primitive gut1.59e-11116
subdivision of digestive tract1.58e-10114
mucosa1.73e-1015
exocrine gland7.10e-1025
exocrine system7.10e-1025
intestinal mucosa4.21e-0913
wall of intestine4.21e-0913
gastrointestinal system mucosa4.21e-0913
digestive tract diverticulum6.49e-0923
sac6.49e-0923
liver3.18e-0822
epithelial sac3.18e-0822
digestive gland3.18e-0822
epithelium of foregut-midgut junction3.18e-0822
anatomical boundary3.18e-0822
hepatobiliary system3.18e-0822
foregut-midgut junction3.18e-0822
hepatic diverticulum3.18e-0822
liver primordium3.18e-0822
septum transversum3.18e-0822
liver bud3.18e-0822
pancreas4.66e-0712
organ component layer5.54e-0724
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