Personal tools

FFCP PHASE1:Mm9::chr4:98590442..98590468,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr4:98590442..98590468,+ |short_description=p4@Usp1 |description=CAGE_peak_4_at_Usp1_5end |association_with_transcript=-32bp_to_ENSMUST00000030289,NM_146144,uc...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:98590442..98590468,+
|DHSsupport=NA
|short_description=p4@Usp1
|DPIdataset=NA
|description=CAGE_peak_4_at_Usp1_5end
|association_with_transcript=-32bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end
|EntrezGene=230484
|EntrezGene=230484
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q8BJQ2
|UniProt=Q8BJQ2
|association_with_transcript=-32bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end
|cluster_id=chr4:98590442..98590468,+
|description=CAGE_peak_4_at_Usp1_5end
|id=chr4:98590442..98590468,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.98e-14!130;UBERON:0000925!5.98e-14!130;UBERON:0006595!5.98e-14!130;UBERON:0001007!5.33e-13!128;UBERON:0001555!5.33e-13!128;UBERON:0007026!5.33e-13!128;UBERON:0002405!1.62e-12!70;UBERON:0004921!2.33e-12!126;UBERON:0004185!2.33e-12!126;UBERON:0003929!5.48e-12!55;UBERON:0005057!8.51e-11!51;UBERON:0000490!7.13e-10!66;UBERON:0004923!1.34e-09!24;UBERON:0005911!1.46e-08!69;UBERON:0002193!1.14e-07!48;UBERON:0000077!2.73e-07!97;UBERON:0002390!5.45e-07!45;UBERON:0003061!5.45e-07!45;UBERON:0001041!6.19e-07!92;UBERON:0005409!7.43e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.60e-13,118;UBERON:0000925,1.60e-13,118;UBERON:0006595,1.60e-13,118;UBERON:0003929,5.12e-13,55;UBERON:0001007,1.48e-12,116;UBERON:0001555,1.48e-12,116;UBERON:0007026,1.48e-12,116;UBERON:0004921,6.59e-12,114;UBERON:0000490,1.15e-10,66;UBERON:0004923,5.20e-10,24;UBERON:0005911,1.40e-08,69;UBERON:0002193,1.63e-08,48;UBERON:0002405,1.63e-08,48;UBERON:0002390,8.73e-08,45;UBERON:0003061,8.73e-08,45;UBERON:0004177,4.42e-07,29;UBERON:0005057,4.42e-07,29;UBERON:0005409,4.62e-07,47;UBERON:0000344,6.83e-07,15
|phase1_expression=0.480446541314382,3.83872948403297,3.63999391511629,3.32710632437513,5.00895729946347,4.8684988854448,6.54115393667472,2.1950964985068,9.57363310631334,11.7032263160997,4.28044920563762,4.86610169871552,2.9104124088305,2.36035086531293,5.99597571268193,7.49158489342356,4.19737126876888,1.41957974411207,0.822686601634433,2.54633791078818,3.99703463710028,1.68794617041505,1.30599894569468,3.51983330145495,2.98232065387321,4.59385571292016,1.29228598847722,4.52489588640367,2.85035129184561,6.30075324399827,3.54768817048488,1.90509202037889,1.23012957516914,0,4.04392267651784,5.65197794218874,3.26670970019791,9.62622750694888,10.1573594788094,7.85285615960697,4.1176204162171,12.294818729252,9.71020706062307,0.125896817975577,0.709638518536602,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0.419959264876088,0,2.51673909086605,3.62681071005672,1.34437519656986,1.28629718017973,0.573066879877513,1.03134418455488,0.404632921719196,0.528990979272033,0,0,0.889294796111139,0.449949858640699,1.97773272513395,1.4209602298922,0.299600110518405,1.15265491596466,1.14058573539325,0.675029691658453,0.841299845405528,0.285650984403804,0.441737081903227,1.22490799214954,0.958454710182364,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.182975287204819,1.04182674111352,0.279182999001381,0,0.30559649555362,0.294628585473668,0.711858403995515,0.372798891650601,0.681535739998656,3.24957708459178,0.579728977403356,2.58127163094416,2.03991400112325,2.69851595818909,1.29955283489534,1.34408066129201,2.94933282276679,0.511290967734173,0.259786004602869,1.7666978725517,0.704217098883403,0,0,0,1.08245520505607,2.53359865475099,1.01104889002957,3.19714863213368,2.07150306917737,0.742210695324124,0.867426633830679,0.913396434936424,1.38369298353635,1.65794904607885,1.29347577849275,0.628332956648377,1.73036477414062,1.87979163995885,6.19227386364912,1.13236794963186,3.3126227769059,4.363877278217,0,0.585561594023094,0.41889341362691,2.29911349687732,2.39630249011841,2.39961092397363,2.1601938602421,0.299581278809645,0.457500602818626,0.628271760564322,0,0.255715457330331,0,0.486723789203273,0.81471491080253,3.23458123586242,0.252722758433675,0.841767423545896,1.17108398666433,1.37941262660084,1.80062129805349,0.753524089178575,1.83698547708585,1.40925092313335,1.78033276663485,0.776110112217047,0.862271971731369,0.378212160335639,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.61734640922383,0.995171334092466,4.91549231119264,4.63226232806487,6.25159698670304,1.03562886267751,1.40715635988658,0.900310307305074,1.18372367792605,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,1.28441876603886,0.658239399653922,0.656669856316381,0.405344047729279,0.438599962275997,1.3173006917463,0.536825675041487,0.420579897128254,0.823236899034275,1.32167513193519,6.08236303326152,1.06644125267617,1.16118335930219,3.8660238396628,2.21851877085677,1.77902435075896,1.33157938278791,2.84717436926707,3.62337700392824,1.50801125280162,1.1937388322469,2.33956904542944,1.79763881730844,2.37751854862164,2.38969527905241,1.32767530667157,1.02823661348756,0,1.22190796707189,0.387904974335251,0.841629838683823,1.01178459398812,0.590440591918409,1.56998727841375,0.863780147452604,2.96452627087149,6.50695912292767,4.91397487783007,4.04751802292737,7.30296436998611,4.58236603529592,4.83789118384698,3.45235364940973,3.72911021582581,3.0201755450689,5.75072826109418,1.86070473834252,0.624075346229121,4.79899868099512,3.40855085691633,2.8946611281802,0.554259570499814,1.13694847062291,1.14075483509418,1.01847051465113,1.17345124144251,1.00503754465089,0.952174563544055,1.36593553500459,1.10344600874334,0.8858587585951,0.956728611944923,1.14704320301017,0.690739927463582,1.73578870297814,1.50791283939272,1.08781136763742,9.34352118736169,1.37968373152366,0.481651769963376,0.117211686592203,1.96721934452011,2.52470927204373,0.94652465824877,3.51394869866975,3.44677436372478,0.238968797952552,1.33679204449436,3.11384183867716,1.21443210502468,2.04579100537918,0.790575555893047,0.321321316421807,1.27746076687442,0.712262414669021,2.11753047159649,1.81467135269789,0,1.45668381692989,1.209294227859,2.26326095707078,1.77181135728464,0.922305443831782,1.80899805217755,1.09060118843252,3.20847640546249,2.84433082142234,3.16255825724996,4.12542172992747,0.680879211507576,1.62054984628179,0.258717367565509,0.857348140126369,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,9.85621173867584,4.2366414172764,0.661585194164886,0.98931751764888,1.45317984026315,1.62844897306021,1.07435109602823,1.47726809770555,1.7488850197791,0,4.27177201994632,1.23832120777933,3.70389054739423,5.83942216714542,5.05768642567793,4.80434163733698,2.20971958992012,1.25956307091292,2.07299960706636,0,1.73984796469624,1.82987520414164,1.40406943068342,1.25452977608681,0.655087691238533,2.15782954215713,1.65306911450672,0.785267825952089,1.55537967950151,3.10669656543463,32.1304975049988,1.64468200648377,1.15820943319968,0.583353565032143,0.774958940866387,1.520605129417,1.05621514781179,2.0832701575032,1.36317147753424,9.18019659138823,13.2493802878618,3.47612232690996,1.41907650703115,1.33524244314275,2.07873316764472,4.833720783022,3.17890167650024,3.4856680360791,2.95379054349154,3.33189284828887,3.27689268616499,3.52891647978942,4.77543615624787,2.88635524920988,2.45441494581295,0.453460767230423,6.43759264784788,8.43310252129072,3.02192309455341,0.772758376128762,5.63047426353546,1.83151624267265,2.14368379079066,2.00628841614145,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0.51776031175182,1.14166082342594,0.399024873401031,1.02440163452481,1.21553358534147,2.09613162627982,2.20612210140017,2.00022055021454,1.64828045791115,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,1.40462261204824,1.15245274328765,0.861532034334199,1.42888107384922,1.39061191133827,1.35036454324594,2.06042950401653,1.61918812147837,1.37147700954166,1.59728225543404,1.1921809497366,0.726732083161643,1.50575008664529,1.01537529470012,0.914639864363863,0.789209134313529,1.08643291076689,0,1.77952527186261,1.97008964751127,1.22769312950907,0.77468420592983,2.12197272079256,0,1.16965804222704,1.07435527024149,0.57386499620653,0.882365676478062,0.927471342481686
|phase1_expression=0.480446541314382,3.83872948403297,3.63999391511629,3.32710632437513,5.00895729946347,4.8684988854448,6.54115393667472,2.1950964985068,9.57363310631334,11.7032263160997,4.28044920563762,4.86610169871552,2.9104124088305,2.36035086531293,5.99597571268193,7.49158489342356,4.19737126876888,1.41957974411207,0.822686601634433,2.54633791078818,3.99703463710028,1.68794617041505,1.30599894569468,3.51983330145495,2.98232065387321,4.59385571292016,1.29228598847722,4.52489588640367,2.85035129184561,6.30075324399827,3.54768817048488,1.90509202037889,1.23012957516914,0,4.04392267651784,5.65197794218874,3.26670970019791,9.62622750694888,10.1573594788094,7.85285615960697,4.1176204162171,12.294818729252,9.71020706062307,0.125896817975577,0.709638518536602,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0.419959264876088,0,2.51673909086605,3.62681071005672,1.34437519656986,1.28629718017973,0.573066879877513,1.03134418455488,0.404632921719196,0.528990979272033,0,0,0.889294796111139,0.449949858640699,1.97773272513395,1.4209602298922,0.299600110518405,1.15265491596466,1.14058573539325,0.675029691658453,0.841299845405528,0.285650984403804,0.441737081903227,1.22490799214954,0.958454710182364,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.182975287204819,1.04182674111352,0.279182999001381,0,0.30559649555362,0.294628585473668,0.711858403995515,0.372798891650601,0.681535739998656,3.24957708459178,0.579728977403356,2.58127163094416,2.03991400112325,2.69851595818909,1.29955283489534,1.34408066129201,2.94933282276679,0.511290967734173,0.259786004602869,1.7666978725517,0.704217098883403,0,0,0,1.08245520505607,2.53359865475099,1.01104889002957,3.19714863213368,2.07150306917737,0.742210695324124,0.867426633830679,0.913396434936424,1.38369298353635,1.65794904607885,1.29347577849275,0.628332956648377,1.73036477414062,1.87979163995885,6.19227386364912,1.13236794963186,3.3126227769059,4.363877278217,0,0.585561594023094,0.41889341362691,2.29911349687732,2.39630249011841,2.39961092397363,2.1601938602421,0.299581278809645,0.457500602818626,0.628271760564322,0,0.255715457330331,0,0.486723789203273,0.81471491080253,3.23458123586242,0.252722758433675,0.841767423545896,1.17108398666433,1.37941262660084,1.80062129805349,0.753524089178575,1.83698547708585,1.40925092313335,1.78033276663485,0.776110112217047,0.862271971731369,0.378212160335639,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.61734640922383,0.995171334092466,4.91549231119264,4.63226232806487,6.25159698670304,1.03562886267751,1.40715635988658,0.900310307305074,1.18372367792605,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,1.28441876603886,0.658239399653922,0.656669856316381,0.405344047729279,0.438599962275997,1.3173006917463,0.536825675041487,0.420579897128254,0.823236899034275,1.32167513193519,6.08236303326152,1.06644125267617,1.16118335930219,3.8660238396628,2.21851877085677,1.77902435075896,1.33157938278791,2.84717436926707,3.62337700392824,1.50801125280162,1.1937388322469,2.33956904542944,1.79763881730844,2.37751854862164,2.38969527905241,1.32767530667157,1.02823661348756,0,1.22190796707189,0.387904974335251,0.841629838683823,1.01178459398812,0.590440591918409,1.56998727841375,0.863780147452604,2.96452627087149,6.50695912292767,4.91397487783007,4.04751802292737,7.30296436998611,4.58236603529592,4.83789118384698,3.45235364940973,3.72911021582581,3.0201755450689,5.75072826109418,1.86070473834252,0.624075346229121,4.79899868099512,3.40855085691633,2.8946611281802,0.554259570499814,1.13694847062291,1.14075483509418,1.01847051465113,1.17345124144251,1.00503754465089,0.952174563544055,1.36593553500459,1.10344600874334,0.8858587585951,0.956728611944923,1.14704320301017,0.690739927463582,1.73578870297814,1.50791283939272,1.08781136763742,9.34352118736169,1.37968373152366,0.481651769963376,0.117211686592203,1.96721934452011,2.52470927204373,0.94652465824877,3.51394869866975,3.44677436372478,0.238968797952552,1.33679204449436,3.11384183867716,1.21443210502468,2.04579100537918,0.790575555893047,0.321321316421807,1.27746076687442,0.712262414669021,2.11753047159649,1.81467135269789,0,1.45668381692989,1.209294227859,2.26326095707078,1.77181135728464,0.922305443831782,1.80899805217755,1.09060118843252,3.20847640546249,2.84433082142234,3.16255825724996,4.12542172992747,0.680879211507576,1.62054984628179,0.258717367565509,0.857348140126369,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,9.85621173867584,4.2366414172764,0.661585194164886,0.98931751764888,1.45317984026315,1.62844897306021,1.07435109602823,1.47726809770555,1.7488850197791,0,4.27177201994632,1.23832120777933,3.70389054739423,5.83942216714542,5.05768642567793,4.80434163733698,2.20971958992012,1.25956307091292,2.07299960706636,0,1.73984796469624,1.82987520414164,1.40406943068342,1.25452977608681,0.655087691238533,2.15782954215713,1.65306911450672,0.785267825952089,1.55537967950151,3.10669656543463,32.1304975049988,1.64468200648377,1.15820943319968,0.583353565032143,0.774958940866387,1.520605129417,1.05621514781179,2.0832701575032,1.36317147753424,9.18019659138823,13.2493802878618,3.47612232690996,1.41907650703115,1.33524244314275,2.07873316764472,4.833720783022,3.17890167650024,3.4856680360791,2.95379054349154,3.33189284828887,3.27689268616499,3.52891647978942,4.77543615624787,2.88635524920988,2.45441494581295,0.453460767230423,6.43759264784788,8.43310252129072,3.02192309455341,0.772758376128762,5.63047426353546,1.83151624267265,2.14368379079066,2.00628841614145,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0.51776031175182,1.14166082342594,0.399024873401031,1.02440163452481,1.21553358534147,2.09613162627982,2.20612210140017,2.00022055021454,1.64828045791115,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,1.40462261204824,1.15245274328765,0.861532034334199,1.42888107384922,1.39061191133827,1.35036454324594,2.06042950401653,1.61918812147837,1.37147700954166,1.59728225543404,1.1921809497366,0.726732083161643,1.50575008664529,1.01537529470012,0.914639864363863,0.789209134313529,1.08643291076689,0,1.77952527186261,1.97008964751127,1.22769312950907,0.77468420592983,2.12197272079256,0,1.16965804222704,1.07435527024149,0.57386499620653,0.882365676478062,0.927471342481686
|short_description=p4@Usp1
}}
}}

Latest revision as of 08:00, 27 September 2015

Short description:p4@Usp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Usp1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -32bp_to_ENSMUST00000030289, NM_146144, uc008tum.1, uc008tun.1_5end
EntrezGene:Usp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Usp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I79.86
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G532.13
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.60e-13118
endoderm1.60e-13118
presumptive endoderm1.60e-13118
gut epithelium5.12e-1355
digestive system1.48e-12116
digestive tract1.48e-12116
primitive gut1.48e-12116
subdivision of digestive tract6.59e-12114
unilaminar epithelium1.15e-1066
organ component layer5.20e-1024
endo-epithelium1.40e-0869
hemolymphoid system1.63e-0848
immune system1.63e-0848
hematopoietic system8.73e-0845
blood island8.73e-0845
hemopoietic organ4.42e-0729
immune organ4.42e-0729
gastrointestinal system4.62e-0747
mucosa6.83e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:98590442..98590468,%2B&oldid=4300572"