FFCP PHASE1:Mm9::chr9:99336967..99336981,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17532 | |EntrezGene=17532 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=620 | |||
|TSSclassifier=NA | |||
|UniProt=O08989,Q3TPX5 | |UniProt=O08989,Q3TPX5 | ||
|association_with_transcript=149bp_to_NM_008624,uc009rec.1_5end | |association_with_transcript=149bp_to_NM_008624,uc009rec.1_5end | ||
|cluster_id=chr9:99336967..99336981,- | |||
|description=CAGE_peak_6_at_Mras_5end | |description=CAGE_peak_6_at_Mras_5end | ||
|id=chr9:99336967..99336981,- | |id=chr9:99336967..99336981,- | ||
|ontology_enrichment_celltype=CL:0002319!3.35e-15!43;CL:0000221!3.74e-15!44;CL:0000133!3.74e-15!44;CL:0000055!1.49e-14!50;CL:0000117!3.56e-11!23;CL:0000337!3.56e-11!23;CL:0000393!8.57e-10!39;CL:0000211!8.57e-10!39;CL:0000540!1.62e-09!33;CL:0000047!1.62e-09!33;CL:0000031!1.62e-09!33;CL:0000404!1.62e-09!33;CL:0000333!2.69e-07!10;CL:0000095!2.69e-07!10;CL:0000243!2.69e-07!10;CL:0000123!2.69e-07!10;CL:0000125!2.69e-07!10;CL:0000030!2.69e-07!10;CL:0000339!2.69e-07!10;CL:0002453!8.43e-07!8;CL:0002321!8.47e-07!70;CL:0000220!8.47e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.17e-19,43;CL:0000221,1.76e-18,44;CL:0000133,1.76e-18,44;CL:0000117,1.10e-16,23;CL:0000337,1.10e-16,23;CL:0002453,9.23e-13,8;CL:0000333,5.90e-12,10;CL:0000095,5.90e-12,10;CL:0000243,5.90e-12,10;CL:0000123,5.90e-12,10;CL:0000125,5.90e-12,10;CL:0000030,5.90e-12,10;CL:0000339,5.90e-12,10;CL:0002321,3.74e-11,70;CL:0000540,4.93e-10,33;CL:0000047,4.93e-10,33;CL:0000031,4.93e-10,33;CL:0000404,4.93e-10,33;CL:0000128,8.40e-10,6;CL:0000126,8.40e-10,6;CL:0000127,8.40e-10,6;CL:0000393,1.01e-08,39;CL:0000211,1.01e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.88e-30!75;UBERON:0001016!8.88e-30!75;UBERON:0001017!6.31e-29!73;UBERON:0005743!6.31e-29!73;UBERON:0004121!1.33e-26!102;UBERON:0000924!1.33e-26!102;UBERON:0006601!1.33e-26!102;UBERON:0001049!2.68e-24!52;UBERON:0005068!2.68e-24!52;UBERON:0006241!2.68e-24!52;UBERON:0007135!2.68e-24!52;UBERON:0000955!7.12e-23!50;UBERON:0006238!7.12e-23!50;UBERON:0002346!1.23e-22!71;UBERON:0003075!1.23e-22!71;UBERON:0007284!1.23e-22!71;UBERON:0002616!1.68e-22!49;UBERON:0000033!1.61e-19!63;UBERON:0002020!4.16e-19!34;UBERON:0003080!1.66e-17!40;UBERON:0002780!7.77e-17!39;UBERON:0001890!7.77e-17!39;UBERON:0006240!7.77e-17!39;UBERON:0002791!2.07e-16!29;UBERON:0003528!2.07e-16!29;UBERON:0001893!2.07e-16!29;UBERON:0003056!6.17e-16!49;UBERON:0000956!4.85e-12!21;UBERON:0001869!4.85e-12!21;UBERON:0000203!4.85e-12!21;UBERON:0000025!2.42e-11!114;UBERON:0002619!7.37e-11!17;UBERON:0004111!2.23e-10!122;UBERON:0007811!2.51e-08!86;UBERON:0000153!7.42e-08!94;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10;UBERON:0003076!2.03e-07!12;UBERON:0003057!2.03e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.77e-44,54;UBERON:0001016,2.21e-43,75;UBERON:0001017,4.12e-43,73;UBERON:0001049,7.93e-42,52;UBERON:0005068,7.93e-42,52;UBERON:0006241,7.93e-42,52;UBERON:0007135,7.93e-42,52;UBERON:0002616,1.40e-34,46;UBERON:0004121,5.85e-34,95;UBERON:0000924,5.85e-34,95;UBERON:0006601,5.85e-34,95;UBERON:0002020,8.66e-34,34;UBERON:0000955,1.33e-33,47;UBERON:0006238,1.33e-33,47;UBERON:0002346,4.17e-33,64;UBERON:0003075,4.17e-33,64;UBERON:0007284,4.17e-33,64;UBERON:0003080,1.92e-29,40;UBERON:0003528,4.40e-28,29;UBERON:0002791,4.40e-28,29;UBERON:0001893,4.40e-28,29;UBERON:0002780,4.43e-28,39;UBERON:0001890,4.43e-28,39;UBERON:0006240,4.43e-28,39;UBERON:0010371,1.94e-27,73;UBERON:0003056,1.22e-23,49;UBERON:0010314,3.07e-20,92;UBERON:0000956,6.39e-19,21;UBERON:0001869,6.39e-19,21;UBERON:0000203,6.39e-19,21;UBERON:0002619,1.55e-17,17;UBERON:0000025,7.34e-15,114;UBERON:0002021,2.31e-14,10;UBERON:0000411,2.31e-14,10;UBERON:0001950,2.31e-14,10;UBERON:0004111,7.56e-14,122;UBERON:0003076,2.95e-12,12;UBERON:0003057,2.95e-12,12;UBERON:0002420,2.98e-10,8;UBERON:0007245,2.98e-10,8;UBERON:0010009,2.98e-10,8;UBERON:0010011,2.98e-10,8;UBERON:0000454,2.98e-10,8;UBERON:0011216,1.06e-09,194;UBERON:0002240,6.32e-08,6;UBERON:0005174,6.32e-08,6;UBERON:0001137,6.32e-08,6;UBERON:0000119,6.50e-07,176;UBERON:0000369,8.64e-07,5;UBERON:0002435,8.64e-07,5;UBERON:0000204,8.64e-07,5;UBERON:0010082,8.64e-07,5;UBERON:0001948,9.74e-07,5;UBERON:0002315,9.74e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.709638518536602,1.46837401729345,3.9119567217402,2.8343270329458,3.29529274101708,3.11087838518853,3.21968769738334,4.31257693094915,0,0,0,0,0.573066879877513,0.515672092277442,0.404632921719196,1.5869729378161,1.90149421051854,1.0165335962074,2.66788438833342,0.449949858640699,0,0.7104801149461,3.89480143673926,6.91592949578798,1.03689612308478,0.540023753326763,1.05162480675691,2.57085885963423,2.87129103237098,0.857435594504678,0.862609239164127,2.75765635983006,1.10115880999389,2.17068474744819,3.22573719838111,1.97829431595291,2.8361169516747,1.56274011167028,3.62937898701795,2.25105044012672,1.68078072554491,1.47314292736834,1.99320353118744,1.3047961207771,1.36307147999731,0.755715601067855,1.15945795480671,0,1.3599426674155,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.346970653532272,0.304465478312141,0.230615497256059,0.753613202763113,0.940709657085638,0.753999547978053,1.48316980640624,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,1.75668478206928,0.83778682725382,0,0,0,0,3.14560342750128,1.37250180845588,2.26177833803156,2.43354048269187,4.34716277461562,2.90903262383384,2.10913641988085,0.305518091550949,0.746441823660558,0.758168275301024,0,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.95251098811859,0.2562274405697,0.468508622798644,1.03481348295606,0,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0,0.465067889500816,0.536546802799238,0.350296027101508,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,2.73376933133365,1.44066457330998,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.442655759869801,0.295220295959204,0,0.740382983530803,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0.704070744865506,0.335012514883631,0.952174563544055,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0.491589944147214,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0,1.76605648986571,1.75817529888305,0.819674726883377,0.252470927204373,0.631016438832513,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0.790575555893047,0.963963949265421,0.709700426041343,0.890328018336276,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,1.36175842301515,0.540183282093931,0,0.214337035031592,0.532020700926821,0.178368817602071,1.48094118541909,1.522324745573,0.23467170806371,1.0591603543191,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0.291480836629851,2.59595422814714,0,0,0,0.376736914009382,0,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0,0,0.56369293868419,0.598066184175915,0,1.16670713006429,0.774958940866387,0.844780627453891,1.29092962510329,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,1.17519231454855,1.15913756419314,0.750729901804728,0.36630324853453,0.428736758158132,0,1.6942555278512,4.14292712856459,2.29158205375759,4.46818274093588,2.74033007908257,3.0215755895588,2.02506750069542,2.2516060161211,5.89085131679466,5.1776031175182,0.415149390336707,0,0.170733605754134,0.729320151204882,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.512201219238954,0.574354689556133,0.476293691283074,0.347652977834566,0.964546102318525,0,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.543216455383447,0.561142271657738,0.830445126869219,0.394017929502254,0,0.619747364743864,0.192906610981141,0.499621155875892,0,0.214871054048298,0.57386499620653,1.10295709559758,0.927471342481686 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.709638518536602,1.46837401729345,3.9119567217402,2.8343270329458,3.29529274101708,3.11087838518853,3.21968769738334,4.31257693094915,0,0,0,0,0.573066879877513,0.515672092277442,0.404632921719196,1.5869729378161,1.90149421051854,1.0165335962074,2.66788438833342,0.449949858640699,0,0.7104801149461,3.89480143673926,6.91592949578798,1.03689612308478,0.540023753326763,1.05162480675691,2.57085885963423,2.87129103237098,0.857435594504678,0.862609239164127,2.75765635983006,1.10115880999389,2.17068474744819,3.22573719838111,1.97829431595291,2.8361169516747,1.56274011167028,3.62937898701795,2.25105044012672,1.68078072554491,1.47314292736834,1.99320353118744,1.3047961207771,1.36307147999731,0.755715601067855,1.15945795480671,0,1.3599426674155,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.346970653532272,0.304465478312141,0.230615497256059,0.753613202763113,0.940709657085638,0.753999547978053,1.48316980640624,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,1.75668478206928,0.83778682725382,0,0,0,0,3.14560342750128,1.37250180845588,2.26177833803156,2.43354048269187,4.34716277461562,2.90903262383384,2.10913641988085,0.305518091550949,0.746441823660558,0.758168275301024,0,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.95251098811859,0.2562274405697,0.468508622798644,1.03481348295606,0,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0,0.465067889500816,0.536546802799238,0.350296027101508,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,2.73376933133365,1.44066457330998,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.442655759869801,0.295220295959204,0,0.740382983530803,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0.704070744865506,0.335012514883631,0.952174563544055,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0.491589944147214,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0,1.76605648986571,1.75817529888305,0.819674726883377,0.252470927204373,0.631016438832513,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0.790575555893047,0.963963949265421,0.709700426041343,0.890328018336276,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,1.36175842301515,0.540183282093931,0,0.214337035031592,0.532020700926821,0.178368817602071,1.48094118541909,1.522324745573,0.23467170806371,1.0591603543191,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0.291480836629851,2.59595422814714,0,0,0,0.376736914009382,0,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0,0,0.56369293868419,0.598066184175915,0,1.16670713006429,0.774958940866387,0.844780627453891,1.29092962510329,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,1.17519231454855,1.15913756419314,0.750729901804728,0.36630324853453,0.428736758158132,0,1.6942555278512,4.14292712856459,2.29158205375759,4.46818274093588,2.74033007908257,3.0215755895588,2.02506750069542,2.2516060161211,5.89085131679466,5.1776031175182,0.415149390336707,0,0.170733605754134,0.729320151204882,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.512201219238954,0.574354689556133,0.476293691283074,0.347652977834566,0.964546102318525,0,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.543216455383447,0.561142271657738,0.830445126869219,0.394017929502254,0,0.619747364743864,0.192906610981141,0.499621155875892,0,0.214871054048298,0.57386499620653,1.10295709559758,0.927471342481686 | ||
|short_description=p6@Mras | |short_description=p6@Mras | ||
}} | }} |
Latest revision as of 07:42, 27 September 2015
Short description: | p6@Mras |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mras_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | 149bp_to_NM_008624, uc009rec.1_5end |
EntrezGene: | Mras |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.17e-19 | 43 |
ectodermal cell | 1.76e-18 | 44 |
neurectodermal cell | 1.76e-18 | 44 |
CNS neuron (sensu Vertebrata) | 1.10e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-16 | 23 |
oligodendrocyte precursor cell | 9.23e-13 | 8 |
migratory neural crest cell | 5.90e-12 | 10 |
neuron associated cell | 5.90e-12 | 10 |
glial cell (sensu Vertebrata) | 5.90e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 5.90e-12 | 10 |
glial cell | 5.90e-12 | 10 |
glioblast | 5.90e-12 | 10 |
glioblast (sensu Vertebrata) | 5.90e-12 | 10 |
embryonic cell | 3.74e-11 | 70 |
neuron | 4.93e-10 | 33 |
neuronal stem cell | 4.93e-10 | 33 |
neuroblast | 4.93e-10 | 33 |
electrically signaling cell | 4.93e-10 | 33 |
oligodendrocyte | 8.40e-10 | 6 |
macroglial cell | 8.40e-10 | 6 |
astrocyte | 8.40e-10 | 6 |
electrically responsive cell | 1.01e-08 | 39 |
electrically active cell | 1.01e-08 | 39 |