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FFCP PHASE1:Mm9::chr6:4853350..4853367,+: Difference between revisions

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(Created page with "{{FFCP |id=chr6:4853350..4853367,+ |short_description=p6@Ppp1r9a |description=CAGE_peak_6_at_Ppp1r9a_5end |association_with_transcript=30bp_to_ENSMUST00000035813,NM_181595...")
 
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{{FFCP
{{FFCP
|id=chr6:4853350..4853367,+
|DHSsupport=NA
|short_description=p6@Ppp1r9a
|DPIdataset=NA
|description=CAGE_peak_6_at_Ppp1r9a_5end
|association_with_transcript=30bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end
|EntrezGene=243725
|EntrezGene=243725
|HGNC=
|HGNC=
|MCL_coexpression_id=90
|TSSclassifier=NA
|UniProt=Q7TN74
|UniProt=Q7TN74
|association_with_transcript=30bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end
|cluster_id=chr6:4853350..4853367,+
|description=CAGE_peak_6_at_Ppp1r9a_5end
|id=chr6:4853350..4853367,+
|ontology_enrichment_celltype=CL:0000117!6.30e-07!23;CL:0000337!6.30e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-08,23;CL:0000337,1.23e-08,23;CL:0002612,6.68e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.42e-15!71;UBERON:0003075!5.42e-15!71;UBERON:0007284!5.42e-15!71;UBERON:0001049!6.96e-15!52;UBERON:0005068!6.96e-15!52;UBERON:0006241!6.96e-15!52;UBERON:0007135!6.96e-15!52;UBERON:0000033!1.25e-13!63;UBERON:0001017!1.64e-13!73;UBERON:0005743!1.64e-13!73;UBERON:0003056!2.58e-13!49;UBERON:0002020!3.35e-13!34;UBERON:0000955!7.33e-13!50;UBERON:0006238!7.33e-13!50;UBERON:0000073!1.70e-12!75;UBERON:0001016!1.70e-12!75;UBERON:0002616!2.21e-12!49;UBERON:0004121!7.14e-12!102;UBERON:0000924!7.14e-12!102;UBERON:0006601!7.14e-12!102;UBERON:0003080!4.30e-11!40;UBERON:0002791!9.77e-11!29;UBERON:0003528!9.77e-11!29;UBERON:0001893!9.77e-11!29;UBERON:0002780!1.66e-10!39;UBERON:0001890!1.66e-10!39;UBERON:0006240!1.66e-10!39;UBERON:0002021!1.09e-08!10;UBERON:0000411!1.09e-08!10;UBERON:0001950!1.09e-08!10;UBERON:0000956!7.61e-07!21;UBERON:0001869!7.61e-07!21;UBERON:0000203!7.61e-07!21;UBERON:0002619!8.43e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-31,54;UBERON:0001049,4.10e-30,52;UBERON:0005068,4.10e-30,52;UBERON:0006241,4.10e-30,52;UBERON:0007135,4.10e-30,52;UBERON:0002020,1.59e-27,34;UBERON:0002346,1.15e-26,64;UBERON:0003075,1.15e-26,64;UBERON:0007284,1.15e-26,64;UBERON:0001017,3.64e-26,73;UBERON:0002616,2.84e-25,46;UBERON:0001016,2.93e-25,75;UBERON:0000955,1.34e-24,47;UBERON:0006238,1.34e-24,47;UBERON:0003528,1.76e-24,29;UBERON:0002791,1.76e-24,29;UBERON:0001893,1.76e-24,29;UBERON:0003080,7.13e-23,40;UBERON:0002021,1.34e-22,10;UBERON:0000411,1.34e-22,10;UBERON:0001950,1.34e-22,10;UBERON:0010371,1.87e-22,73;UBERON:0002780,2.70e-21,39;UBERON:0001890,2.70e-21,39;UBERON:0006240,2.70e-21,39;UBERON:0003056,4.40e-21,49;UBERON:0004121,5.42e-21,95;UBERON:0000924,5.42e-21,95;UBERON:0006601,5.42e-21,95;UBERON:0002619,1.33e-17,17;UBERON:0000956,2.45e-16,21;UBERON:0001869,2.45e-16,21;UBERON:0000203,2.45e-16,21;UBERON:0010314,2.84e-16,92;UBERON:0000025,8.76e-11,114;UBERON:0004111,1.31e-09,122;UBERON:0002420,2.44e-09,8;UBERON:0007245,2.44e-09,8;UBERON:0010009,2.44e-09,8;UBERON:0010011,2.44e-09,8;UBERON:0000454,2.44e-09,8;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0000369,2.45e-07,5;UBERON:0002435,2.45e-07,5;UBERON:0000204,2.45e-07,5;UBERON:0010082,2.45e-07,5;UBERON:0002257,6.68e-07,3
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.135005938331691,0,0.571301968807607,0.662605622854841,0.489963196859816,0.287536413054709,0,0,1.65993539510744,2.4577045320999,0.659431438650969,1.09785172322892,2.08365348222704,0.279182999001381,1.68828783009504,1.98637722109853,2.06240009831567,1.56608848879013,2.05039390407831,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0,2.24685959107234,17.3850229071078,3.76963056338593,7.30062144807561,9.46147192122223,3.1168206683934,4.86723789203273,0.203678727700633,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.720248519221397,1.05493372485001,0.816437989815934,0.896796041993948,0.843315521037559,1.03481348295606,0,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.292399974850665,0,0,5.25724871410318,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.610953983535943,0,0.350679099451593,0.189709611372772,0.295220295959204,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0.670025029767263,0.238043640886014,0.195133647857799,0.788175720530955,0,1.11618338060241,0.163863314715738,0,0,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.963963949265421,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.129358683782755,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.484393280087717,0.120625849856312,0,0.164140899745061,0,1.66882771809459,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,1.43224823328345,0.734015410979976,0.966336483304024,0.576060012515731,0,0.405450430580328,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0.386379188064381,0,0.183151624267265,0,0,4.51801474093653,5.52390283808612,4.58316410751517,4.1244763762485,8.22099023724771,15.107877947794,4.72515750162264,6.30449684513909,5.43770890781046,3.10656187051092,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.655490552289177,0.576226371643824,0.402048282689293,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.846984423737976,0.338458431566706,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,1.15743966588685,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.135005938331691,0,0.571301968807607,0.662605622854841,0.489963196859816,0.287536413054709,0,0,1.65993539510744,2.4577045320999,0.659431438650969,1.09785172322892,2.08365348222704,0.279182999001381,1.68828783009504,1.98637722109853,2.06240009831567,1.56608848879013,2.05039390407831,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0,2.24685959107234,17.3850229071078,3.76963056338593,7.30062144807561,9.46147192122223,3.1168206683934,4.86723789203273,0.203678727700633,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.720248519221397,1.05493372485001,0.816437989815934,0.896796041993948,0.843315521037559,1.03481348295606,0,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.292399974850665,0,0,5.25724871410318,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.610953983535943,0,0.350679099451593,0.189709611372772,0.295220295959204,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0.670025029767263,0.238043640886014,0.195133647857799,0.788175720530955,0,1.11618338060241,0.163863314715738,0,0,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.963963949265421,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.129358683782755,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.484393280087717,0.120625849856312,0,0.164140899745061,0,1.66882771809459,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,1.43224823328345,0.734015410979976,0.966336483304024,0.576060012515731,0,0.405450430580328,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0.386379188064381,0,0.183151624267265,0,0,4.51801474093653,5.52390283808612,4.58316410751517,4.1244763762485,8.22099023724771,15.107877947794,4.72515750162264,6.30449684513909,5.43770890781046,3.10656187051092,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.655490552289177,0.576226371643824,0.402048282689293,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.846984423737976,0.338458431566706,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,1.15743966588685,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421
|short_description=p6@Ppp1r9a
}}
}}

Latest revision as of 07:23, 27 September 2015

Short description:p6@Ppp1r9a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Ppp1r9a_5end
Coexpression cluster:MCL_coexpression_mm9:90
Association with transcript: 30bp_to_ENSMUST00000035813, NM_181595, uc009avy.1, uc009avz.1_5end
EntrezGene:Ppp1r9a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Ppp1r9a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.23e-0823
neuroblast (sensu Vertebrata)1.23e-0823
neuron of the ventral spinal cord6.68e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.52e-3154
neural tube4.10e-3052
neural rod4.10e-3052
future spinal cord4.10e-3052
neural keel4.10e-3052
gray matter1.59e-2734
neurectoderm1.15e-2664
neural plate1.15e-2664
presumptive neural plate1.15e-2664
central nervous system3.64e-2673
regional part of brain2.84e-2546
nervous system2.93e-2575
brain1.34e-2447
future brain1.34e-2447
brain grey matter1.76e-2429
regional part of telencephalon1.76e-2429
telencephalon1.76e-2429
anterior neural tube7.13e-2340
occipital lobe1.34e-2210
visual cortex1.34e-2210
neocortex1.34e-2210
ecto-epithelium1.87e-2273
regional part of forebrain2.70e-2139
forebrain2.70e-2139
future forebrain2.70e-2139
pre-chordal neural plate4.40e-2149
ectoderm-derived structure5.42e-2195
ectoderm5.42e-2195
presumptive ectoderm5.42e-2195
regional part of cerebral cortex1.33e-1717
cerebral cortex2.45e-1621
cerebral hemisphere2.45e-1621
pallium2.45e-1621
structure with developmental contribution from neural crest2.84e-1692
tube8.76e-11114
anatomical conduit1.31e-09122
basal ganglion2.44e-098
nuclear complex of neuraxis2.44e-098
aggregate regional part of brain2.44e-098
collection of basal ganglia2.44e-098
cerebral subcortex2.44e-098
posterior neural tube1.33e-0712
chordal neural plate1.33e-0712
corpus striatum2.45e-075
striatum2.45e-075
ventral part of telencephalon2.45e-075
future corpus striatum2.45e-075
ventral horn of spinal cord6.68e-073
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