FFCP PHASE1:Mm9::chr9:96919270..96919298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211949 | |EntrezGene=211949 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R5B6 | |UniProt=Q8R5B6 | ||
|association_with_transcript=-8bp_to_ENSMUST00000055433_5end | |association_with_transcript=-8bp_to_ENSMUST00000055433_5end | ||
|cluster_id=chr9:96919270..96919298,- | |||
|description=CAGE_peak_3_at_Spsb4_5end | |description=CAGE_peak_3_at_Spsb4_5end | ||
|id=chr9:96919270..96919298,- | |id=chr9:96919270..96919298,- | ||
|ontology_enrichment_celltype=CL:0000117!3.98e-09!23;CL:0000337!3.98e-09!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.98e-09!23;CL:0000337!3.98e-09!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-15,23;CL:0000337,1.06e-15,23;CL:0000540,6.13e-10,33;CL:0000047,6.13e-10,33;CL:0000031,6.13e-10,33;CL:0000404,6.13e-10,33;CL:0002319,4.25e-08,43;CL:0000393,6.39e-08,39;CL:0000211,6.39e-08,39;CL:0000221,7.75e-08,44;CL:0000133,7.75e-08,44;CL:0000120,2.30e-07,3;CL:0002612,3.75e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.36e-07!102;UBERON:0000924!5.36e-07!102;UBERON:0006601!5.36e-07!102 | |ontology_enrichment_uberon=UBERON:0004121!5.36e-07!102;UBERON:0000924!5.36e-07!102;UBERON:0006601!5.36e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.98e-12,21;UBERON:0003103,1.68e-10,43;UBERON:0002113,2.01e-08,14;UBERON:0003918,2.01e-08,14;UBERON:0011143,2.01e-08,14;UBERON:0005095,2.01e-08,14;UBERON:0007687,2.01e-08,14;UBERON:0002020,5.51e-08,34;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5;UBERON:0002257,3.75e-07,3;UBERON:0010314,5.99e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.41621522601718,4.23192783417626,1.26766280701236,0,0,0.449949858640699,0,0,0,0,0.933206510776299,1.89008313664367,1.05162480675691,0.856952953211411,1.76694832761291,1.22490799214954,1.62937300731002,0,0,0.510749352340751,0.307213066512487,2.37395317914349,1.73826522844578,0.52091337055676,1.11673199600552,0,0.61119299110724,1.17851434189467,1.42371680799103,2.05039390407831,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0.381210681219194,0.449371918214468,0,1.38219787324151,0.173824320192276,0,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0,0,1.56144531555244,1.37941262660084,1.26043490863744,1.35634336052144,1.2246569847239,0.896796041993948,0.468508622798644,0.517406741478031,1.07783996466421,0.756424320671277,1.23165786914764,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0.702213187313235,1.02939162845886,0,1.03562886267751,0.469052119962192,1.98068267607116,0.473489471170421,2.36117078096885,0.925602677324269,0.697601834251224,1.3413670069981,0.583826711835847,1.31647879930784,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,1.3377599609307,0,0,0.639864751605702,0.464473343720877,0.38660238396628,2.21851877085677,1.55664630691409,0.951128130562796,0,0.658795818896044,0.502670417600539,0.994782360205754,0.58489226135736,0.898819408654221,0,0,1.32767530667157,1.14248512609729,0,1.62921062276251,0.969762435838129,2.80543279561274,1.45444035385792,1.32849133181642,1.255989822731,1.1105744752962,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.938760993154008,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0,0,2.57057053137446,0.283880170416537,0,0.162886959353576,0.659880491890142,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.905510786479282,0.857348140126369,0,0,0.329098041204242,0,0.23467170806371,0,0,0,0.322928853391811,0.422190474497091,0.477489376012546,0.328281799490123,0,0.741701208042039,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0,0,1.42351197111511,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0.453460767230423,0.443971906748129,0.358855426437903,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,1.97195960409936,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.565879024158229,0.37456602987953,0.448176066834085,0,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0,0,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0.526139422875686,0,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.192906610981141,0.249810577937946,0.701794825336225,0,0.191288332068843,0.661774257358546,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.41621522601718,4.23192783417626,1.26766280701236,0,0,0.449949858640699,0,0,0,0,0.933206510776299,1.89008313664367,1.05162480675691,0.856952953211411,1.76694832761291,1.22490799214954,1.62937300731002,0,0,0.510749352340751,0.307213066512487,2.37395317914349,1.73826522844578,0.52091337055676,1.11673199600552,0,0.61119299110724,1.17851434189467,1.42371680799103,2.05039390407831,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0.381210681219194,0.449371918214468,0,1.38219787324151,0.173824320192276,0,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0,0,1.56144531555244,1.37941262660084,1.26043490863744,1.35634336052144,1.2246569847239,0.896796041993948,0.468508622798644,0.517406741478031,1.07783996466421,0.756424320671277,1.23165786914764,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0.702213187313235,1.02939162845886,0,1.03562886267751,0.469052119962192,1.98068267607116,0.473489471170421,2.36117078096885,0.925602677324269,0.697601834251224,1.3413670069981,0.583826711835847,1.31647879930784,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,1.3377599609307,0,0,0.639864751605702,0.464473343720877,0.38660238396628,2.21851877085677,1.55664630691409,0.951128130562796,0,0.658795818896044,0.502670417600539,0.994782360205754,0.58489226135736,0.898819408654221,0,0,1.32767530667157,1.14248512609729,0,1.62921062276251,0.969762435838129,2.80543279561274,1.45444035385792,1.32849133181642,1.255989822731,1.1105744752962,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.938760993154008,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0,0,2.57057053137446,0.283880170416537,0,0.162886959353576,0.659880491890142,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.905510786479282,0.857348140126369,0,0,0.329098041204242,0,0.23467170806371,0,0,0,0.322928853391811,0.422190474497091,0.477489376012546,0.328281799490123,0,0.741701208042039,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0,0,1.42351197111511,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0.453460767230423,0.443971906748129,0.358855426437903,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,1.97195960409936,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.565879024158229,0.37456602987953,0.448176066834085,0,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0,0,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0.526139422875686,0,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.192906610981141,0.249810577937946,0.701794825336225,0,0.191288332068843,0.661774257358546,0.231867835620421 | ||
|short_description=p3@Spsb4 | |short_description=p3@Spsb4 | ||
}} | }} |
Latest revision as of 07:18, 27 September 2015
Short description: | p3@Spsb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Spsb4_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENSMUST00000055433_5end |
EntrezGene: | Spsb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-15 | 23 |
neuron | 6.13e-10 | 33 |
neuronal stem cell | 6.13e-10 | 33 |
neuroblast | 6.13e-10 | 33 |
electrically signaling cell | 6.13e-10 | 33 |
neural cell | 4.25e-08 | 43 |
electrically responsive cell | 6.39e-08 | 39 |
electrically active cell | 6.39e-08 | 39 |
ectodermal cell | 7.75e-08 | 44 |
neurectodermal cell | 7.75e-08 | 44 |
granule cell | 2.30e-07 | 3 |
neuron of the ventral spinal cord | 3.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.98e-12 | 21 |
compound organ | 1.68e-10 | 43 |
kidney | 2.01e-08 | 14 |
kidney mesenchyme | 2.01e-08 | 14 |
upper urinary tract | 2.01e-08 | 14 |
kidney rudiment | 2.01e-08 | 14 |
kidney field | 2.01e-08 | 14 |
gray matter | 5.51e-08 | 34 |
regional part of spinal cord | 2.36e-07 | 5 |
gray matter of spinal cord | 2.36e-07 | 5 |
ventral horn of spinal cord | 3.75e-07 | 3 |
structure with developmental contribution from neural crest | 5.99e-07 | 92 |