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FFCP PHASE1:Mm9::chr3:107499263..107499266,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229709
|EntrezGene=229709
|HGNC=
|HGNC=
|MCL_coexpression_id=208
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=156bp_to_ENSMUST00000138116_5end
|association_with_transcript=156bp_to_ENSMUST00000138116_5end
|cluster_id=chr3:107499263..107499266,-
|description=CAGE_peak_4_at_Ahcyl1_5end
|description=CAGE_peak_4_at_Ahcyl1_5end
|id=chr3:107499263..107499266,-
|id=chr3:107499263..107499266,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,1.86e-10,3;CL:0000117,9.30e-10,23;CL:0000337,9.30e-10,23;CL:0002613,9.58e-10,3;CL:0000540,7.96e-08,33;CL:0000047,7.96e-08,33;CL:0000031,7.96e-08,33;CL:0000404,7.96e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.93e-16!52;UBERON:0005068!4.93e-16!52;UBERON:0006241!4.93e-16!52;UBERON:0007135!4.93e-16!52;UBERON:0002346!6.40e-15!71;UBERON:0003075!6.40e-15!71;UBERON:0007284!6.40e-15!71;UBERON:0000955!9.66e-15!50;UBERON:0006238!9.66e-15!50;UBERON:0002616!3.43e-14!49;UBERON:0000033!1.05e-13!63;UBERON:0001017!1.92e-12!73;UBERON:0005743!1.92e-12!73;UBERON:0000073!5.69e-12!75;UBERON:0001016!5.69e-12!75;UBERON:0003080!1.44e-11!40;UBERON:0003056!2.37e-11!49;UBERON:0002780!5.46e-11!39;UBERON:0001890!5.46e-11!39;UBERON:0006240!5.46e-11!39;UBERON:0000025!1.71e-10!114;UBERON:0002020!3.98e-10!34;UBERON:0004121!1.20e-09!102;UBERON:0000924!1.20e-09!102;UBERON:0006601!1.20e-09!102;UBERON:0004111!1.48e-09!122;UBERON:0002791!1.62e-08!29;UBERON:0003528!1.62e-08!29;UBERON:0001893!1.62e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002420,7.02e-24,8;UBERON:0007245,7.02e-24,8;UBERON:0010009,7.02e-24,8;UBERON:0010011,7.02e-24,8;UBERON:0000454,7.02e-24,8;UBERON:0000073,2.35e-19,54;UBERON:0001017,2.54e-18,73;UBERON:0002616,2.74e-18,46;UBERON:0001049,6.89e-18,52;UBERON:0005068,6.89e-18,52;UBERON:0006241,6.89e-18,52;UBERON:0007135,6.89e-18,52;UBERON:0000955,8.06e-18,47;UBERON:0006238,8.06e-18,47;UBERON:0001016,1.03e-17,75;UBERON:0002346,1.71e-15,64;UBERON:0003075,1.71e-15,64;UBERON:0007284,1.71e-15,64;UBERON:0000369,4.97e-15,5;UBERON:0002435,4.97e-15,5;UBERON:0000204,4.97e-15,5;UBERON:0010082,4.97e-15,5;UBERON:0002950,4.03e-13,4;UBERON:0001891,4.03e-13,4;UBERON:0009616,4.03e-13,4;UBERON:0010286,4.03e-13,4;UBERON:0010371,4.45e-13,73;UBERON:0004121,5.11e-13,95;UBERON:0000924,5.11e-13,95;UBERON:0006601,5.11e-13,95;UBERON:0003080,3.59e-12,40;UBERON:0002780,1.07e-10,39;UBERON:0001890,1.07e-10,39;UBERON:0006240,1.07e-10,39;UBERON:0003528,1.13e-10,29;UBERON:0002791,1.13e-10,29;UBERON:0001893,1.13e-10,29;UBERON:0002038,1.86e-10,3;UBERON:0009663,1.86e-10,3;UBERON:0009661,1.86e-10,3;UBERON:0000125,1.86e-10,3;UBERON:0002308,1.86e-10,3;UBERON:0010314,1.57e-09,92;UBERON:0003056,1.99e-09,49;UBERON:0004733,4.49e-09,6;UBERON:0004732,4.49e-09,6;UBERON:0002028,4.49e-09,6;UBERON:0007277,4.49e-09,6;UBERON:0002020,8.28e-09,34;UBERON:0000025,7.73e-08,114;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0004111,4.79e-07,122;UBERON:0003076,9.74e-07,12;UBERON:0003057,9.74e-07,12
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.850432901510698,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0.420649922702764,0.285650984403804,0.883474163806454,0.122490799214954,0.862609239164127,0.919218786610021,0,2.55374676170375,2.30409799884365,1.05509030184155,1.55528994124096,1.56274011167028,1.95428099300967,1.68828783009504,1.83357897332172,0.883885756421003,0.854230084794618,0.372798891650601,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.421333260395256,0.511290967734173,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,1.3481157546434,1.83000241127451,1.00523481690292,1.04294592115366,0.767146371990992,1.45451631191692,1.62241263067758,1.12023300235348,0.248813941220186,0,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.612328492361951,0.896796041993948,0.374806898238915,0.258703370739016,0.646703978798527,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0,0,0.232533944750408,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,0.162137619091711,0.438599962275997,0.219550115291051,0,1.05144974282064,0.411618449517138,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.420814919341911,0.632365371242573,0.295220295959204,0,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,1.99259867206745,0.327869890753351,0,0,0,1.29254038639679,0.477937595905104,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,2.03967832211561,0,0.206386867963223,0.370389054739423,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.41326727862668,0,0.259229946583586,0,2.81846469342095,0,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0.352071715937262,0.2604087696879,0,1.20792060413003,2.59227005632079,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.965947970160952,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.548783918618318,0,0,0,0.355905054372522,0.492522411877817,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.850432901510698,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0.420649922702764,0.285650984403804,0.883474163806454,0.122490799214954,0.862609239164127,0.919218786610021,0,2.55374676170375,2.30409799884365,1.05509030184155,1.55528994124096,1.56274011167028,1.95428099300967,1.68828783009504,1.83357897332172,0.883885756421003,0.854230084794618,0.372798891650601,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.421333260395256,0.511290967734173,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,1.3481157546434,1.83000241127451,1.00523481690292,1.04294592115366,0.767146371990992,1.45451631191692,1.62241263067758,1.12023300235348,0.248813941220186,0,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.612328492361951,0.896796041993948,0.374806898238915,0.258703370739016,0.646703978798527,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0,0,0.232533944750408,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,0.162137619091711,0.438599962275997,0.219550115291051,0,1.05144974282064,0.411618449517138,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.420814919341911,0.632365371242573,0.295220295959204,0,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,1.99259867206745,0.327869890753351,0,0,0,1.29254038639679,0.477937595905104,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,2.03967832211561,0,0.206386867963223,0.370389054739423,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.540026704109006,0.209088296014469,0.436725127492355,0.269728692769641,0.41326727862668,0,0.259229946583586,0,2.81846469342095,0,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0.352071715937262,0.2604087696879,0,1.20792060413003,2.59227005632079,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.965947970160952,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.548783918618318,0,0,0,0.355905054372522,0.492522411877817,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p4@Ahcyl1
|short_description=p4@Ahcyl1
}}
}}

Latest revision as of 07:08, 27 September 2015

Short description:p4@Ahcyl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ahcyl1_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: 156bp_to_ENSMUST00000138116_5end
EntrezGene:Ahcyl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ahcyl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra1.86e-103
CNS neuron (sensu Vertebrata)9.30e-1023
neuroblast (sensu Vertebrata)9.30e-1023
striatum neuron9.58e-103
neuron7.96e-0833
neuronal stem cell7.96e-0833
neuroblast7.96e-0833
electrically signaling cell7.96e-0833

Uber anatomy
Ontology termp-valuen
basal ganglion7.02e-248
nuclear complex of neuraxis7.02e-248
aggregate regional part of brain7.02e-248
collection of basal ganglia7.02e-248
cerebral subcortex7.02e-248
regional part of nervous system2.35e-1954
central nervous system2.54e-1873
regional part of brain2.74e-1846
neural tube6.89e-1852
neural rod6.89e-1852
future spinal cord6.89e-1852
neural keel6.89e-1852
brain8.06e-1847
future brain8.06e-1847
nervous system1.03e-1775
neurectoderm1.71e-1564
neural plate1.71e-1564
presumptive neural plate1.71e-1564
corpus striatum4.97e-155
striatum4.97e-155
ventral part of telencephalon4.97e-155
future corpus striatum4.97e-155
regional part of midbrain4.03e-134
midbrain4.03e-134
presumptive midbrain4.03e-134
midbrain neural tube4.03e-134
ecto-epithelium4.45e-1373
ectoderm-derived structure5.11e-1395
ectoderm5.11e-1395
presumptive ectoderm5.11e-1395
anterior neural tube3.59e-1240
regional part of forebrain1.07e-1039
forebrain1.07e-1039
future forebrain1.07e-1039
brain grey matter1.13e-1029
regional part of telencephalon1.13e-1029
telencephalon1.13e-1029
substantia nigra1.86e-103
telencephalic nucleus1.86e-103
midbrain nucleus1.86e-103
neural nucleus1.86e-103
nucleus of brain1.86e-103
structure with developmental contribution from neural crest1.57e-0992
pre-chordal neural plate1.99e-0949
segmental subdivision of hindbrain4.49e-096
segmental subdivision of nervous system4.49e-096
hindbrain4.49e-096
presumptive hindbrain4.49e-096
gray matter8.28e-0934
tube7.73e-08114
medulla oblongata1.00e-072
brainstem1.00e-072
myelencephalon1.00e-072
future myelencephalon1.00e-072
anatomical conduit4.79e-07122
posterior neural tube9.74e-0712
chordal neural plate9.74e-0712
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