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FFCP PHASE1:Mm9::chr8:107788486..107788518,-: Difference between revisions

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{{FFCP|EntrezGene=71609|HGNC=|MCL_coexpression_id=12|UniProt=Q3U0V2,D6RGL2,B2RRZ7|association_with_transcript=0bp_to_ENSMUST00000034359,ENSMUST00000147670,NM_001033161,uc009nby.1_5end|description=CAGE_peak_1_at_Tradd_5end|id=chr8:107788486..107788518,-|ontology_enrichment_celltype=CL:0000063!1.72e-09!66;CL:0000219!3.46e-07!54|ontology_enrichment_celltype_v019_2=CL:0000219,3.46e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.75e-14!130;UBERON:0000925!7.75e-14!130;UBERON:0006595!7.75e-14!130;UBERON:0001007!1.32e-13!128;UBERON:0001555!1.32e-13!128;UBERON:0007026!1.32e-13!128;UBERON:0004921!1.27e-12!126;UBERON:0004185!1.27e-12!126;UBERON:0000160!1.59e-10!43;UBERON:0005409!2.04e-10!59;UBERON:0000344!1.74e-09!15;UBERON:0004923!1.44e-08!24;UBERON:0001242!2.62e-08!13;UBERON:0000060!2.62e-08!13;UBERON:0001262!2.62e-08!13;UBERON:0004786!2.62e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.14e-14,118;UBERON:0000925,9.14e-14,118;UBERON:0006595,9.14e-14,118;UBERON:0001007,1.50e-13,116;UBERON:0001555,1.50e-13,116;UBERON:0007026,1.50e-13,116;UBERON:0004921,1.46e-12,114;UBERON:0000160,2.30e-12,31;UBERON:0005409,2.40e-11,47;UBERON:0000344,1.74e-09,15;UBERON:0004923,1.44e-08,24;UBERON:0001242,2.62e-08,13;UBERON:0001262,2.62e-08,13;UBERON:0004786,2.62e-08,13|phase1_expression=3.20297694209588,69.0971307125935,70.0698828659885,88.6220139129012,80.1433167914156,23.8388566114883,24.0621019813391,19.2393751927949,5.20918271961167,6.08567768437183,9.07455231595176,8.45584885350566,17.1200729931206,17.6589212886375,9.66018309265422,8.50396123037269,6.29605690315332,18.1390745080987,15.4939309974485,20.7950929381035,6.63337663178344,11.6170412905036,13.3211892460857,40.4780829667319,50.9288603969117,84.412098724908,63.7527754315431,53.4368657061005,79.6198127522207,46.8776041353471,58.3151243023451,18.4158895303293,20.2971379902908,0,16.1756907060714,16.4572298904907,12.4543307320045,28.8786825208466,24.2213956802378,19.8939022710043,18.8234076169925,6.14740936462601,19.9059244742773,13.5968563413623,14.2941473019516,9.54443111240744,33.6428278069657,12.8634842264463,15.1583466086786,12.6379434398284,15.2585199571645,20.125359011096,13.5903910906766,12.3311564141929,12.0993767691287,14.9210472900849,12.3209379173665,14.4388185837684,4.04632921719196,6.34789175126439,2.53532561402472,23.7191172448392,22.2323699027785,41.3953869949444,44.4989863155138,44.0497671266582,24.2676089519908,29.9690278150813,3.62913643079672,5.13022565660425,6.73039876324422,2.57085885963423,5.74258206474195,3.79721477566358,4.50473713785711,3.67687514644008,5.50579404996943,6.12899222808901,3.07213066512487,3.03338461779446,2.8361169516747,3.64639359389732,7.81712397203867,2.25105044012672,5.50073691996516,2.94628585473668,4.27115042397309,3.91438836233131,6.89108359331975,8.31287161174641,5.2175607966302,10.3250865237766,6.79971333707751,23.746940432064,13.6453047664011,7.6164570806547,13.6231087527799,18.2360445158522,25.9786004602869,28.6205055353376,5.21120653173718,12.8326477414318,7.64415719119937,0,12.3399893376392,11.4011939463794,12.1325866803548,17.9268691158924,11.9111426477699,11.4300447079915,7.45986905094384,10.0473607843007,8.99400439298628,12.0578112442098,7.05532242814229,11.8126595849895,25.4610816766405,6.65157041831594,14.153768831198,6.95597454773859,8.17113618303456,7.27312879702833,82.0123749359738,3.22058876712702,3.77004072264219,57.2223803667245,5.03223522924865,8.99854096490112,6.98886248901856,4.79330046095433,3.66000482254901,1.63350657746724,4.51943232499919,3.06858548796397,5.194701113989,4.38051410282946,5.29564692021645,8.9573018839267,9.35074206204597,12.6265113531884,3.3831315170303,5.9774547152703,5.40186389416048,3.91832526372859,3.12967896096108,4.86832137082429,3.27956035959051,6.72628763921441,2.80238390812695,3.40390944302075,2.46331573829528,9.20622076195814,8.34141747676794,12.537077994798,8.43706759272568,3.58261680273288,15.4486901208912,9.26452465612975,11.6507034752193,2.69263504296152,3.28336483973535,4.50155153652537,4.02466050494857,5.3126342571799,6.94202007993202,4.18561100550734,4.29237442239391,5.3712057488898,5.59503489705834,4.76085645829376,5.26947262048062,7.16379938384128,5.92785311285837,4.2946054003319,6.51898840548794,3.91037527041281,91.8564216694958,48.6589042660922,3.62590025909898,2.78684006232526,7.47431275668141,10.8909103296605,14.2321948060717,21.1150444984941,41.758557415917,22.8931547066375,21.1121575392226,21.089386036362,20.6661932346267,40.44687338944,44.9567143739364,46.3999166682676,6.44870863240478,3.42745537829186,11.270773567308,3.05476991767971,6.20647958936402,4.55882829287071,7.71485752915939,7.38050739898011,8.00693511991011,9.62497878590044,18.6765155064904,6.50695912292767,6.87956482896211,5.17182858485164,6.28866376304359,7.95884627182976,10.4396599230382,8.34318798607351,4.21551589615092,8.23684239564244,15.814502718009,13.7692150637346,9.36113019343682,18.185679212192,15.2487801493625,13.50841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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71609
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q3U0V2,D6RGL2,B2RRZ7
|association_with_transcript=0bp_to_ENSMUST00000034359,ENSMUST00000147670,NM_001033161,uc009nby.1_5end
|cluster_id=chr8:107788486..107788518,-
|description=CAGE_peak_1_at_Tradd_5end
|id=chr8:107788486..107788518,-
|ontology_enrichment_celltype=CL:0000063!1.72e-09!66;CL:0000219!3.46e-07!54
|ontology_enrichment_celltype_v019_2=CL:0000219,3.46e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.75e-14!130;UBERON:0000925!7.75e-14!130;UBERON:0006595!7.75e-14!130;UBERON:0001007!1.32e-13!128;UBERON:0001555!1.32e-13!128;UBERON:0007026!1.32e-13!128;UBERON:0004921!1.27e-12!126;UBERON:0004185!1.27e-12!126;UBERON:0000160!1.59e-10!43;UBERON:0005409!2.04e-10!59;UBERON:0000344!1.74e-09!15;UBERON:0004923!1.44e-08!24;UBERON:0001242!2.62e-08!13;UBERON:0000060!2.62e-08!13;UBERON:0001262!2.62e-08!13;UBERON:0004786!2.62e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.14e-14,118;UBERON:0000925,9.14e-14,118;UBERON:0006595,9.14e-14,118;UBERON:0001007,1.50e-13,116;UBERON:0001555,1.50e-13,116;UBERON:0007026,1.50e-13,116;UBERON:0004921,1.46e-12,114;UBERON:0000160,2.30e-12,31;UBERON:0005409,2.40e-11,47;UBERON:0000344,1.74e-09,15;UBERON:0004923,1.44e-08,24;UBERON:0001242,2.62e-08,13;UBERON:0001262,2.62e-08,13;UBERON:0004786,2.62e-08,13
|phase1_expression=3.20297694209588,69.0971307125935,70.0698828659885,88.6220139129012,80.1433167914156,23.8388566114883,24.0621019813391,19.2393751927949,5.20918271961167,6.08567768437183,9.07455231595176,8.45584885350566,17.1200729931206,17.6589212886375,9.66018309265422,8.50396123037269,6.29605690315332,18.1390745080987,15.4939309974485,20.7950929381035,6.63337663178344,11.6170412905036,13.3211892460857,40.4780829667319,50.9288603969117,84.412098724908,63.7527754315431,53.4368657061005,79.6198127522207,46.8776041353471,58.3151243023451,18.4158895303293,20.2971379902908,0,16.1756907060714,16.4572298904907,12.4543307320045,28.8786825208466,24.2213956802378,19.8939022710043,18.8234076169925,6.14740936462601,19.9059244742773,13.5968563413623,14.2941473019516,9.54443111240744,33.6428278069657,12.8634842264463,15.1583466086786,12.6379434398284,15.2585199571645,20.125359011096,13.5903910906766,12.3311564141929,12.0993767691287,14.9210472900849,12.3209379173665,14.4388185837684,4.04632921719196,6.34789175126439,2.53532561402472,23.7191172448392,22.2323699027785,41.3953869949444,44.4989863155138,44.0497671266582,24.2676089519908,29.9690278150813,3.62913643079672,5.13022565660425,6.73039876324422,2.57085885963423,5.74258206474195,3.79721477566358,4.50473713785711,3.67687514644008,5.50579404996943,6.12899222808901,3.07213066512487,3.03338461779446,2.8361169516747,3.64639359389732,7.81712397203867,2.25105044012672,5.50073691996516,2.94628585473668,4.27115042397309,3.91438836233131,6.89108359331975,8.31287161174641,5.2175607966302,10.3250865237766,6.79971333707751,23.746940432064,13.6453047664011,7.6164570806547,13.6231087527799,18.2360445158522,25.9786004602869,28.6205055353376,5.21120653173718,12.8326477414318,7.64415719119937,0,12.3399893376392,11.4011939463794,12.1325866803548,17.9268691158924,11.9111426477699,11.4300447079915,7.45986905094384,10.0473607843007,8.99400439298628,12.0578112442098,7.05532242814229,11.8126595849895,25.4610816766405,6.65157041831594,14.153768831198,6.95597454773859,8.17113618303456,7.27312879702833,82.0123749359738,3.22058876712702,3.77004072264219,57.2223803667245,5.03223522924865,8.99854096490112,6.98886248901856,4.79330046095433,3.66000482254901,1.63350657746724,4.51943232499919,3.06858548796397,5.194701113989,4.38051410282946,5.29564692021645,8.9573018839267,9.35074206204597,12.6265113531884,3.3831315170303,5.9774547152703,5.40186389416048,3.91832526372859,3.12967896096108,4.86832137082429,3.27956035959051,6.72628763921441,2.80238390812695,3.40390944302075,2.46331573829528,9.20622076195814,8.34141747676794,12.537077994798,8.43706759272568,3.58261680273288,15.4486901208912,9.26452465612975,11.6507034752193,2.69263504296152,3.28336483973535,4.50155153652537,4.02466050494857,5.3126342571799,6.94202007993202,4.18561100550734,4.29237442239391,5.3712057488898,5.59503489705834,4.76085645829376,5.26947262048062,7.16379938384128,5.92785311285837,4.2946054003319,6.51898840548794,3.91037527041281,91.8564216694958,48.6589042660922,3.62590025909898,2.78684006232526,7.47431275668141,10.8909103296605,14.2321948060717,21.1150444984941,41.758557415917,22.8931547066375,21.1121575392226,21.089386036362,20.6661932346267,40.44687338944,44.9567143739364,46.3999166682676,6.44870863240478,3.42745537829186,11.270773567308,3.05476991767971,6.20647958936402,4.55882829287071,7.71485752915939,7.38050739898011,8.00693511991011,9.62497878590044,18.6765155064904,6.50695912292767,6.87956482896211,5.17182858485164,6.28866376304359,7.95884627182976,10.4396599230382,8.34318798607351,4.21551589615092,8.23684239564244,15.814502718009,13.7692150637346,9.36113019343682,18.185679212192,15.2487801493625,13.5084185981743,14.7802552133284,5.11626811780309,5.54080919902888,4.2436271443797,6.33663670378956,9.5478566741835,12.6163129669587,12.8788207586147,12.7684466726015,8.858587585951,14.3509291791738,12.6174752331118,14.5055384767352,13.7416605652436,15.0791283939272,16.3171705145613,11.8023425524569,11.0374698521893,6.10092241953609,6.79827782234778,10.8197063948606,4.79694761688309,11.3582958989852,8.58965237452605,12.0637102730367,13.1432838873904,12.0311284004493,9.34152551603147,16.1924280669958,13.151513606009,9.48690667071656,4.17717711348349,11.7810270722863,9.79360820169904,6.18970445543589,10.7230579932148,14.6019652173959,3.39892890616974,8.16273603804828,5.28094223316515,9.44966057218473,9.53048958626175,11.62927319257,10.1789444253702,7.84294232446387,13.5895805912401,9.48767477174989,13.4076206222643,9.53230896110606,4.68158844481407,7.1147276080515,6.21577401591618,4.96552654198366,5.88617098086833,7.56925494769756,7.30715877875038,10.3255551548033,11.2270997557825,11.2469483008031,9.72828892354732,6.45857706783622,7.84068024066026,9.66915986425405,11.4898629821543,26.2332752966866,6.48988557036784,15.5492501526046,9.08102219038179,7.40778109478847,7.72310673719233,8.20165366326151,11.6676868335327,6.79913719975421,6.29781535456461,5.2515990045681,26.7307773044232,4.4287039101359,6.91286188231286,5.61627772273367,9.82714991268003,11.3548533148012,10.9240120571705,9.58780086413897,22.5110110106265,52.2348342365925,16.1548221402601,1.69107881605257,4.48549638131936,5.46013018508422,5.44463327363333,7.36210993823067,5.91346439217724,4.92900402312167,6.2498104725096,5.7672639434141,2.41584120826006,3.74439008135225,14.5365115488962,6.89265731986558,9.96296284498824,9.61414090035683,9.30938817470904,10.7287931581883,11.658958603437,10.9290250109187,8.6831146955407,9.52585083187498,10.0826185136841,11.1101984043318,11.8340565217605,10.7526750007043,12.0167103316062,7.5475224147182,6.81825310232015,10.4088462145729,13.7164611762855,16.7037403151552,13.5532201957776,16.9351019472462,13.0408747049194,3.95326289831947,3.68260189205742,1.14579102687879,3.60891682921744,6.85082519770642,2.2661816921691,3.37511250115903,3.60256962579376,1.81256963593682,4.65984280576638,2.07574695168353,3.99024873401031,4.95127456686989,7.05009479498053,5.8691685535835,6.80220981265052,5.11167473943715,7.82933217507798,5.13470735346904,6.57012750585873,5.57654459758527,6.41329560712659,4.68207537349412,5.76226371643823,5.51380501973887,6.66811167796303,5.67833197129792,3.8581844092741,6.59337441285291,7.21274708658547,10.2860775715625,6.03417740941747,5.48403236878838,6.1045494985578,5.08190654242785,5.753793336634,7.86590283352922,7.10288220882176,4.75314398460516,7.85599180320834,4.98267076121531,5.31924204828043,9.00308294973317,5.88759996506671,8.8737041051325,9.74261253957989,7.25187986180766,9.02458427002853,6.50380329034067,7.94129108830256,8.34724208233517
|short_description=p1@Tradd
}}

Latest revision as of 07:05, 27 September 2015

Short description:p1@Tradd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tradd_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000034359, ENSMUST00000147670, NM_001033161, uc009nby.1_5end
EntrezGene:Tradd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tradd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I569.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I670.07
CD326+ enterocyte, pool1.CNhs13542.11848-124I388.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I480.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.06
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.12
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D140.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D250.93
GP2+ M cell, pool1.CNhs13228.11845-124H984.41
GP2+ M cell, pool2.CNhs13231.11846-124I163.75
GP2+ M cell, pool3.CNhs13240.11847-124I253.44
Ileum epithelium, pool1.CNhs13199.10252-104B979.62
Ileum epithelium, pool2.CNhs13232.10253-104C146.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C858.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H124.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H319.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B733.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.86
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.72
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C741.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E744.50
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D244.05
Mouse Microglia, donor1.CNhs12629.11718-123C824.27
Mouse Microglia, donor2.CNhs12634.11736-123E829.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D96.89
Mouse Schwann, donor2.CNhs12573.11746-123F98.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.75
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I828.62
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.93
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F512.06
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A825.46
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F56.96
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H482.01
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H757.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.96
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G412.63
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G15.27
heart, neonate N20.CNhs11127.821-26I67.16
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I391.86
intestine, adult.CNhs10496.178-9A348.66
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D314.23
intestine, embryo E18.CNhs10526.1289-20F721.12
intestine, neonate N00.CNhs11126.644-26D141.76
intestine, neonate N01.CNhs11192.1322-23E922.89
intestine, neonate N06.CNhs11102.688-20B821.11
intestine, neonate N07.CNhs11095.720-20F221.09
intestine, neonate N10.CNhs11098.755-23A520.67
intestine, neonate N20.CNhs11187.827-18D140.45
intestine, neonate N25.CNhs11121.1352-25E344.96
intestine, neonate N30.CNhs11131.1384-42G146.40
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G74.56
kidney, neonate N10.CNhs11206.758-6D57.71
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H19.62
liver, adult pregnant day01.CNhs10466.508-5B218.68
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A318.19
liver, neonate N25.CNhs11198.1368-26H115.25
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B114.78
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F85.54
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A69.55
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C612.88
lung, neonate N06.CNhs11212.683-20E512.77
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E614.35
lung, neonate N20.CNhs11109.822-18A412.62
lung, neonate N25.CNhs11119.1359-25C714.51
lung, neonate N30.CNhs11133.1394-42H213.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A36.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G610.72
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G311.23
prostate, adult.CNhs10470.859-1F811.25
skin, adult.CNhs10492.30-1C39.73
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I59.67
skin, neonate N10.CNhs11108.762-6C411.49
small intestine, neonate N16.CNhs11114.790-21I126.23
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G215.55
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G311.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.25
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C611.35
stomach, neonate N03.CNhs11193.1340-24B810.92
stomach, neonate N07.CNhs11210.718-18A99.59
stomach, neonate N25.CNhs11104.1355-25E422.51
stomach, neonate N30.CNhs11134.1386-42I152.23
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I29.96
thymus, embryo E16.CNhs11002.456-26C59.61
thymus, embryo E17.CNhs10581.478-18C19.31
thymus, embryo E18.CNhs10595.1273-19G410.73
thymus, neonate N02.CNhs11181.1541-43F811.66
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C48.68
thymus, neonate N07.CNhs11211.713-19D39.53
thymus, neonate N10.CNhs11194.748-24E410.08
thymus, neonate N20.CNhs11186.820-7A211.11
thymus, neonate N25.CNhs11125.1362-25G711.83
thymus, neonate N30.CNhs11132.1393-42G210.75
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.41
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E513.55
vagina, adult.CNhs10502.89-27D516.94
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C29.02
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B48.35





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell3.46e-0754

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.14e-14118
endoderm9.14e-14118
presumptive endoderm9.14e-14118
digestive system1.50e-13116
digestive tract1.50e-13116
primitive gut1.50e-13116
subdivision of digestive tract1.46e-12114
intestine2.30e-1231
gastrointestinal system2.40e-1147
mucosa1.74e-0915
organ component layer1.44e-0824
intestinal mucosa2.62e-0813
wall of intestine2.62e-0813
gastrointestinal system mucosa2.62e-0813
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